Guide to the Human Genome
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Name: ECSIT Sequence: fasta or formatted (431aa) NCBI GI: 20149633
Description:

evolutionarily conserved signaling intermediate in Toll pathway isoform 1

Referenced in:

Toll-like Receptors

Other entries for this name:
alt prot [296aa] evolutionarily conserved signaling intermediate in Toll pathway i...
alt prot [217aa] evolutionarily conserved signaling intermediate in Toll pathway i...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         32           3
 C cysteine            1.4          6           1
 D aspartate           4.2         18           2
 E glutamate           8.1         35           2
 F phenylalanine       4.4         19           1
 G glycine             5.8         25           2
 H histidine           2.8         12           1
 I isoleucine          3.9         17           2
 K lysine              3.0         13           1
 L leucine            10.0         43           2
 M methionine          2.8         12           1
 N asparagine          3.2         14           1
 P proline             9.3         40           2
 Q glutamine           7.2         31           3
 R arginine            7.4         32           2
 S serine              4.6         20           2
 T threonine           3.5         15           1
 V valine              6.5         28           2
 W tryptophan          1.6          7           1
 Y tyrosine            2.8         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   evolutionarily conserved signaling intermediate in T... 
ECSIT                 0.604   evolutionarily conserved signaling intermediate in ...
ECSIT                 0.425   evolutionarily conserved signaling intermediate in ...
DISP1                 0.010   dispatched A 
SORBS2                0.006   sorbin and SH3 domain containing 2 isoform 8 
SORBS2                0.006   sorbin and SH3 domain containing 2 isoform 7 
SORBS2                0.006   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.006   sorbin and SH3 domain containing 2 isoform 5 
SORBS2                0.006   sorbin and SH3 domain containing 2 isoform 4 
SORBS2                0.006   sorbin and SH3 domain containing 2 isoform 3 
LOC100293045          0.006   PREDICTED: hypothetical protein 
NF1                   0.006   neurofibromin isoform 1 
NF1                   0.006   neurofibromin isoform 2 
CNDP2                 0.006   CNDP dipeptidase 2 
SORBS2                0.006   sorbin and SH3 domain containing 2 isoform 2 
SORBS2                0.006   sorbin and SH3 domain containing 2 isoform 1 
LOC401321             0.006   PREDICTED: hypothetical protein 
LOC401321             0.006   PREDICTED: hypothetical protein 
LOC401321             0.006   PREDICTED: hypothetical protein 
LOC401321             0.006   PREDICTED: hypothetical protein 
LRRC16B               0.005   leucine rich repeat containing 16B 
ZNF687                0.005   zinc finger protein 687 
RB1                   0.005   retinoblastoma 1 
SLC4A3                0.005   solute carrier family 4, anion exchanger, member 3 ...
SLC4A3                0.005   solute carrier family 4, anion exchanger, member 3 ...
C20orf200             0.005   hypothetical protein LOC253868 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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