Guide to the Human Genome
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Name: ECSIT Sequence: fasta or formatted (217aa) NCBI GI: 215599070
Description:

evolutionarily conserved signaling intermediate in Toll pathway isoform 3

Referenced in:

Toll-like Receptors

Other entries for this name:
alt prot [431aa] evolutionarily conserved signaling intermediate in Toll pathway i...
alt prot [296aa] evolutionarily conserved signaling intermediate in Toll pathway i...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         20           2
 C cysteine            1.8          4           1
 D aspartate           5.1         11           2
 E glutamate           9.2         20           2
 F phenylalanine       2.3          5           1
 G glycine             6.9         15           2
 H histidine           2.3          5           1
 I isoleucine          3.2          7           1
 K lysine              1.4          3           1
 L leucine             9.7         21           2
 M methionine          2.3          5           1
 N asparagine          3.2          7           1
 P proline             8.8         19           2
 Q glutamine           8.3         18           3
 R arginine            5.1         11           1
 S serine              5.1         11           2
 T threonine           5.1         11           1
 V valine              5.5         12           2
 W tryptophan          2.8          6           1
 Y tyrosine            2.8          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   evolutionarily conserved signaling intermediate in ... 
ECSIT                 0.855   evolutionarily conserved signaling intermediate in T...
ECSIT                 0.117   evolutionarily conserved signaling intermediate in ...
CNDP2                 0.012   CNDP dipeptidase 2 
SORBS2                0.012   sorbin and SH3 domain containing 2 isoform 8 
SORBS2                0.012   sorbin and SH3 domain containing 2 isoform 7 
SORBS2                0.012   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.012   sorbin and SH3 domain containing 2 isoform 5 
SORBS2                0.012   sorbin and SH3 domain containing 2 isoform 4 
SORBS2                0.012   sorbin and SH3 domain containing 2 isoform 3 
SORBS2                0.012   sorbin and SH3 domain containing 2 isoform 2 
SORBS2                0.012   sorbin and SH3 domain containing 2 isoform 1 
SALL2                 0.009   sal-like 2 
LRRC16B               0.009   leucine rich repeat containing 16B 
SLC4A3                0.009   solute carrier family 4, anion exchanger, member 3 ...
SLC4A3                0.009   solute carrier family 4, anion exchanger, member 3 ...
POLE                  0.007   DNA-directed DNA polymerase epsilon 
RANBP9                0.007   RAN binding protein 9 
FBXW8                 0.007   F-box and WD repeat domain containing 8 isoform 2 [H...
FBXW8                 0.007   F-box and WD repeat domain containing 8 isoform 1 [H...
KIAA0513              0.007   hypothetical protein LOC9764 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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