C20orf200 15620

Name: C20orf200	Sequence: fasta or formatted (134aa)		NCBI GI: 22749483
Description: hypothetical protein LOC253868		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 9 1 C cysteine 0.7 1 1 D aspartate 0.7 1 1 E glutamate 3.0 4 1 F phenylalanine 2.2 3 1 G glycine 14.2 19 2 H histidine 8.2 11 1 I isoleucine 1.5 2 1 K lysine 2.2 3 1 L leucine 10.4 14 4 M methionine 2.2 3 1 N asparagine 0.7 1 1 P proline 12.7 17 2 Q glutamine 4.5 6 1 R arginine 10.4 14 2 S serine 11.2 15 2 T threonine 4.5 6 1 V valine 1.5 2 1 W tryptophan 1.5 2 1 Y tyrosine 0.7 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC253868 SF3B4 0.053 splicing factor 3b, subunit 4 ARHGEF5 0.046 rho guanine nucleotide exchange factor 5 HRNR 0.042 hornerin PPP1R10 0.038 protein phosphatase 1, regulatory subunit 10 KLHDC7B 0.038 kelch domain containing 7B RSBN1 0.038 round spermatid basic protein 1 DVL2 0.038 dishevelled 2 LTBP1 0.034 latent transforming growth factor beta binding prote... SF1 0.034 splicing factor 1 isoform 3 SF1 0.034 splicing factor 1 isoform 2 SF1 0.034 splicing factor 1 isoform 1 LOC100287256 0.034 PREDICTED: hypothetical protein LOC100287256 0.034 PREDICTED: hypothetical protein XP_002342497 CKAP4 0.030 cytoskeleton-associated protein 4 COL18A1 0.030 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.030 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.030 alpha 1 type XVIII collagen isoform 1 precursor [Ho... PPP1R13L 0.030 protein phosphatase 1, regulatory subunit 13 like [... PPP1R13L 0.030 protein phosphatase 1, regulatory subunit 13 like [H... LOC100293496 0.030 PREDICTED: hypothetical protein LOC100293268 0.030 PREDICTED: hypothetical protein SNRPB 0.030 small nuclear ribonucleoprotein polypeptide B/B' isof... FCHO1 0.027 FCH domain only 1 isoform c FCHO1 0.027 FCH domain only 1 isoform b FCHO1 0.027 FCH domain only 1 isoform b FCHO1 0.027 FCH domain only 1 isoform a ATXN1 0.027 ataxin 1 ATXN1 0.027 ataxin 1 ANTXR1 0.027 anthrax toxin receptor 1 isoform 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.