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Search of human proteins with 21539663
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21539663 praja 1 isoform c [Homo sapiens]
(455 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21539663 praja 1 isoform c [Homo sapiens] 945 0.0
gi|74048537 praja 1 isoform b [Homo sapiens] 746 0.0
gi|41281725 praja 1 isoform a [Homo sapiens] 746 0.0
gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens] 412 e-115
gi|37622894 ring finger protein 126 [Homo sapiens] 82 1e-15
gi|33859668 Rabring 7 [Homo sapiens] 77 4e-14
gi|7706039 ring finger protein 181 [Homo sapiens] 72 8e-13
gi|5174653 ring finger protein 6 [Homo sapiens] 59 1e-08
gi|34305295 ring finger protein 6 [Homo sapiens] 59 1e-08
gi|34305293 ring finger protein 6 [Homo sapiens] 59 1e-08
gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 56 8e-08
gi|34452684 ring finger protein, LIM domain interacting [Homo sa... 56 8e-08
gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo ... 55 1e-07
gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo ... 55 1e-07
gi|21040269 ring finger protein 133 [Homo sapiens] 55 2e-07
gi|7662486 ring finger protein 44 [Homo sapiens] 55 2e-07
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 54 3e-07
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 54 3e-07
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 54 3e-07
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 54 3e-07
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 54 3e-07
gi|29788758 ring finger protein 130 [Homo sapiens] 53 5e-07
gi|150378447 zinc and ring finger 3 [Homo sapiens] 53 7e-07
gi|37675277 ring finger protein 148 [Homo sapiens] 52 9e-07
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 52 1e-06
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 52 1e-06
gi|14149702 ring finger protein 167 [Homo sapiens] 52 1e-06
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 51 2e-06
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 51 2e-06
gi|58331204 ring finger protein 150 [Homo sapiens] 51 2e-06
>gi|21539663 praja 1 isoform c [Homo sapiens]
Length = 455
Score = 945 bits (2443), Expect = 0.0
Identities = 455/455 (100%), Positives = 455/455 (100%)
Query: 1 MGQESSKPVWPNPTGGYQSNTGRRYGRRHAYVSFRPPTSQRERIASQRKTNSEVPMHRSA 60
MGQESSKPVWPNPTGGYQSNTGRRYGRRHAYVSFRPPTSQRERIASQRKTNSEVPMHRSA
Sbjct: 1 MGQESSKPVWPNPTGGYQSNTGRRYGRRHAYVSFRPPTSQRERIASQRKTNSEVPMHRSA 60
Query: 61 PSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSSTSRWRDTANDNEGHSDGLARRG 120
PSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSSTSRWRDTANDNEGHSDGLARRG
Sbjct: 61 PSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSSTSRWRDTANDNEGHSDGLARRG 120
Query: 121 RGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSDDYYKYCDEDSDSD 180
RGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSDDYYKYCDEDSDSD
Sbjct: 121 RGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSDDYYKYCDEDSDSD 180
Query: 181 KEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGTSPGPGASASAGAG 240
KEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGTSPGPGASASAGAG
Sbjct: 181 KEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGTSPGPGASASAGAG 240
Query: 241 AGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEGDNDSGHELMQPGV 300
AGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEGDNDSGHELMQPGV
Sbjct: 241 AGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEGDNDSGHELMQPGV 300
Query: 301 FMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFLTYMALEERLAQAM 360
FMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFLTYMALEERLAQAM
Sbjct: 301 FMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFLTYMALEERLAQAM 360
Query: 361 ETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVA 420
ETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVA
Sbjct: 361 ETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVA 420
Query: 421 TELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL 455
TELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL
Sbjct: 421 TELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL 455
>gi|74048537 praja 1 isoform b [Homo sapiens]
Length = 588
Score = 746 bits (1926), Expect = 0.0
Identities = 359/364 (98%), Positives = 361/364 (99%)
Query: 92 DNEDYSSTSRWRDTANDNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVP 151
D++ STSRWRDTANDNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVP
Sbjct: 225 DDDMPHSTSRWRDTANDNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVP 284
Query: 152 RRRRTMADPDFWTHSDDYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGK 211
RRRRTMADPDFWTHSDDYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGK
Sbjct: 285 RRRRTMADPDFWTHSDDYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGK 344
Query: 212 EEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEG 271
EEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEG
Sbjct: 345 EEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEG 404
Query: 272 EIPWLQYHENDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFAD 331
EIPWLQYHENDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFAD
Sbjct: 405 EIPWLQYHENDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFAD 464
Query: 332 GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPE 391
GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPE
Sbjct: 465 GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPE 524
Query: 392 ILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF 451
ILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF
Sbjct: 525 ILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF 584
Query: 452 PPPL 455
PPPL
Sbjct: 585 PPPL 588
Score = 92.8 bits (229), Expect = 6e-19
Identities = 73/196 (37%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 56 MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSSTSRWRDTANDNE----- 110
MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYS A+ +
Sbjct: 1 MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAY 60
Query: 111 GHSDGLARRGRGESSSGYPE-PKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSDDY 169
GH D E +G E P + + D++ + R P F + S D
Sbjct: 61 GHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDV 120
Query: 170 YKYCDEDSDSDKEWIAALRRKY--RSREQTLSSSGESWETLPGKEEREPPQAKVSASTGT 227
+ D+ +A R + +S + SSS T ERE + + A
Sbjct: 121 REERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSR 180
Query: 228 SP----GPGASASAGA 239
+P G G + S A
Sbjct: 181 APVSICGGGENTSKSA 196
>gi|41281725 praja 1 isoform a [Homo sapiens]
Length = 643
Score = 746 bits (1926), Expect = 0.0
Identities = 359/364 (98%), Positives = 361/364 (99%)
Query: 92 DNEDYSSTSRWRDTANDNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVP 151
D++ STSRWRDTANDNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVP
Sbjct: 280 DDDMPHSTSRWRDTANDNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVP 339
Query: 152 RRRRTMADPDFWTHSDDYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGK 211
RRRRTMADPDFWTHSDDYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGK
Sbjct: 340 RRRRTMADPDFWTHSDDYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGK 399
Query: 212 EEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEG 271
EEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEG
Sbjct: 400 EEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEG 459
Query: 272 EIPWLQYHENDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFAD 331
EIPWLQYHENDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFAD
Sbjct: 460 EIPWLQYHENDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFAD 519
Query: 332 GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPE 391
GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPE
Sbjct: 520 GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPE 579
Query: 392 ILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF 451
ILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF
Sbjct: 580 ILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF 639
Query: 452 PPPL 455
PPPL
Sbjct: 640 PPPL 643
Score = 207 bits (527), Expect = 2e-53
Identities = 128/251 (50%), Positives = 147/251 (58%), Gaps = 12/251 (4%)
Query: 1 MGQESSKPVWPNPTGGYQSNTGRRYGRRHAYVSFRPPTSQRERIASQRKTNSEVPMHRSA 60
MGQESSKPVWPNPTGGYQSNTGRRYGRRHAYVSFRPPTSQRERIASQRKTNSEVPMHRSA
Sbjct: 1 MGQESSKPVWPNPTGGYQSNTGRRYGRRHAYVSFRPPTSQRERIASQRKTNSEVPMHRSA 60
Query: 61 PSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSSTSRWRDTANDNE-----GHSDG 115
PSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYS A+ + GH D
Sbjct: 61 PSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAYGHIDS 120
Query: 116 LARRGRGESSSGYPE-PKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSDDYYKYCD 174
E +G E P + + D++ + R P F + S D + D
Sbjct: 121 YGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDVREERD 180
Query: 175 EDSDSDKEWIAALRRKY--RSREQTLSSSGESWETLPGKEEREPPQAKVSASTGTSP--- 229
+ +A R + +S + SSS T ERE + + A +P
Sbjct: 181 KLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSRAPVSI 240
Query: 230 -GPGASASAGA 239
G G + S A
Sbjct: 241 CGGGENTSKSA 251
>gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens]
Length = 708
Score = 412 bits (1059), Expect = e-115
Identities = 231/422 (54%), Positives = 268/422 (63%), Gaps = 46/422 (10%)
Query: 44 IASQRKTNSEVPMHRSAPSQTTK-RSRSPFSTTRRSWDDSESSGTNLNIDNEDYSSTSRW 102
I S++ TN H S+P Q + + R S+++ + T N S RW
Sbjct: 293 ICSEQNTNDREKNHGSSPEQVVRPKVRKLISSSQVDQE------TGFNRHEAKQRSVQRW 346
Query: 103 RDTANDNEGHSDGLARRGR---GESSSGYPEPKYPE--DKREARSDQVKPEKVPRRRRTM 157
R+ E SD L + GE + +P Y +RE ++Q+ E R
Sbjct: 347 REALEVEESGSDDLLIKCEEYDGEHDCMFLDPPYSRVITQRETENNQMTSESGATAGRQE 406
Query: 158 ADPDFWTHSDDYYKYCDEDSDS----DKEWIAALRRKYRSREQTLSSSGESWETLPGKEE 213
D FW DYY+ D+D DS D EW A+L ++ E+ SSS ESWETLPGK+E
Sbjct: 407 VDNTFWNGCGDYYQLYDKDEDSSECSDGEWSASLPHRFSGTEKDQSSSDESWETLPGKDE 466
Query: 214 REPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQE-EQASLEEGE 272
EP S+ S EE +E SLQE EQ SLEEGE
Sbjct: 467 NEP---------------------------ELQSDSSGPEEENQELSLQEGEQTSLEEGE 499
Query: 273 IPWLQYHE-NDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFAD 331
IPWLQY+E N+SSS+ N+ +E QP FMLDGNNNLEDDSSVSEDL+VDWSLFDGFAD
Sbjct: 500 IPWLQYNEVNESSSDEGNEPANEFAQPA-FMLDGNNNLEDDSSVSEDLDVDWSLFDGFAD 558
Query: 332 GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPE 391
GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESID LPE
Sbjct: 559 GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPE 618
Query: 392 ILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF 451
LV EDH A+GQE CCPICCSEY+K ++ATELPCHH+FHKPCVSIWLQKSGTCPVCR F
Sbjct: 619 TLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHF 678
Query: 452 PP 453
PP
Sbjct: 679 PP 680
Score = 72.8 bits (177), Expect = 6e-13
Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 38/130 (29%)
Query: 1 MGQESSKPVWPNPTGGYQSNTGRRYGRRHAYVSFRPPTSQRERIASQ------------- 47
M QES K VWP P GGYQ+ TGRRYGRRHAYVSF+P ++ ER +
Sbjct: 12 MDQESGKAVWPKPAGGYQTITGRRYGRRHAYVSFKPCMTRHERSLGRAGDDYEVLELDDV 71
Query: 48 ------------------------RKTNSEVPMHRSAPSQTTKRSRSPFSTTRRSWDDSE 83
K+ +E+P SA +QTT+ S+S F S + +
Sbjct: 72 PKENSSGSSPLDQVDSSLPSEPIFEKSETEIPTCGSALNQTTESSQS-FVAVHHSEEGRD 130
Query: 84 SSGTNLNIDN 93
+ G++ N+ N
Sbjct: 131 TLGSSTNLHN 140
>gi|37622894 ring finger protein 126 [Homo sapiens]
Length = 311
Score = 82.0 bits (201), Expect = 1e-15
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 379 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 438
PPA KE I ALP + VTE+H VG + CP+C +Y GE +LPC+H FH C+ WL
Sbjct: 203 PPADKEKIQALPTVPVTEEH--VGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWL 260
Query: 439 QKSGTCPVCR 448
++ +CPVCR
Sbjct: 261 EQHDSCPVCR 270
>gi|33859668 Rabring 7 [Homo sapiens]
Length = 304
Score = 76.6 bits (187), Expect = 4e-14
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 379 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 438
PPA KE I +LP + VT++ +G E CP+C +Y E +LPC+H+FH C+ WL
Sbjct: 202 PPADKEKITSLPTVTVTQEQVDMGLE--CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWL 259
Query: 439 QKSGTCPVCR 448
+ TCPVCR
Sbjct: 260 ELHDTCPVCR 269
>gi|7706039 ring finger protein 181 [Homo sapiens]
Length = 153
Score = 72.4 bits (176), Expect = 8e-13
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 379 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 438
PPA+K ++ LP ++ E+ CP+C E+ + E A E+PCHH FH C+ WL
Sbjct: 52 PPAAKTVVENLPRTVIRGSQA----ELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWL 107
Query: 439 QKSGTCPVCRCMFP 452
K+ +CP+CR P
Sbjct: 108 SKTNSCPLCRYELP 121
>gi|5174653 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 58.5 bits (140), Expect = 1e-08
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 382 SKESIDALPEILVTEDHGAVGQEM--CCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQ 439
+KE ID L +H ++ E+ C +C S+YV G +LPC H FH C+ WL
Sbjct: 607 TKEQIDNLSTRHY--EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS 664
Query: 440 KSGTCPVCR 448
++ TCP+CR
Sbjct: 665 ENCTCPICR 673
>gi|34305295 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 58.5 bits (140), Expect = 1e-08
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 382 SKESIDALPEILVTEDHGAVGQEM--CCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQ 439
+KE ID L +H ++ E+ C +C S+YV G +LPC H FH C+ WL
Sbjct: 607 TKEQIDNLSTRHY--EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS 664
Query: 440 KSGTCPVCR 448
++ TCP+CR
Sbjct: 665 ENCTCPICR 673
>gi|34305293 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 58.5 bits (140), Expect = 1e-08
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 382 SKESIDALPEILVTEDHGAVGQEM--CCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQ 439
+KE ID L +H ++ E+ C +C S+YV G +LPC H FH C+ WL
Sbjct: 607 TKEQIDNLSTRHY--EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS 664
Query: 440 KSGTCPVCR 448
++ TCP+CR
Sbjct: 665 ENCTCPICR 673
>gi|34452686 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 55.8 bits (133), Expect = 8e-08
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 382 SKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 441
+KE ID L G C +C +EY +G +LPC H +H C+ WL ++
Sbjct: 549 TKEQIDNL----AMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 604
Query: 442 GTCPVCR 448
TCP+CR
Sbjct: 605 STCPICR 611
Score = 32.7 bits (73), Expect = 0.70
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 6/150 (4%)
Query: 169 YYKYCDEDSD-----SDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSA 223
Y+ Y D DS+ S++ A R R SSSG S + + S
Sbjct: 418 YFMYSDSDSEPTGSVSNRNMERAESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSSSP 477
Query: 224 STGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDS 283
S+ +S G + S+ G++ GS+ S RE + E G +P+L +
Sbjct: 478 SS-SSGGESSETSSDLFEGSNEGSSSSGSSGARREGRHRAPVTFDESGSLPFLSLAQFFL 536
Query: 284 SSEGDNDSGHELMQPGVFMLDGNNNLEDDS 313
+E D+D L + + L + E+D+
Sbjct: 537 LNEDDDDQPRGLTKEQIDNLAMRSFGENDA 566
>gi|34452684 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 55.8 bits (133), Expect = 8e-08
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 382 SKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 441
+KE ID L G C +C +EY +G +LPC H +H C+ WL ++
Sbjct: 549 TKEQIDNL----AMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 604
Query: 442 GTCPVCR 448
TCP+CR
Sbjct: 605 STCPICR 611
Score = 32.7 bits (73), Expect = 0.70
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 6/150 (4%)
Query: 169 YYKYCDEDSD-----SDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSA 223
Y+ Y D DS+ S++ A R R SSSG S + + S
Sbjct: 418 YFMYSDSDSEPTGSVSNRNMERAESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSSSP 477
Query: 224 STGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDS 283
S+ +S G + S+ G++ GS+ S RE + E G +P+L +
Sbjct: 478 SS-SSGGESSETSSDLFEGSNEGSSSSGSSGARREGRHRAPVTFDESGSLPFLSLAQFFL 536
Query: 284 SSEGDNDSGHELMQPGVFMLDGNNNLEDDS 313
+E D+D L + + L + E+D+
Sbjct: 537 LNEDDDDQPRGLTKEQIDNLAMRSFGENDA 566
>gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo
sapiens]
Length = 183
Score = 55.1 bits (131), Expect = 1e-07
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 386 IDALPEILVTEDHGAVGQEMC-CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTC 444
+ LPE + +EM C IC E+V G+ LPC H+FH C+ WL +S TC
Sbjct: 66 LQCLPEEVYDPGRDKSEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTC 125
Query: 445 PVCR 448
P CR
Sbjct: 126 PYCR 129
>gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo
sapiens]
Length = 183
Score = 55.1 bits (131), Expect = 1e-07
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 386 IDALPEILVTEDHGAVGQEMC-CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTC 444
+ LPE + +EM C IC E+V G+ LPC H+FH C+ WL +S TC
Sbjct: 66 LQCLPEEVYDPGRDKSEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTC 125
Query: 445 PVCR 448
P CR
Sbjct: 126 PYCR 129
>gi|21040269 ring finger protein 133 [Homo sapiens]
Length = 376
Score = 54.7 bits (130), Expect = 2e-07
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 407 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRC 449
C IC Y ++ L C H+FHK C+ W+ GTCP+C+C
Sbjct: 256 CVICFERYKPNDIVRILTCKHFFHKNCIDPWILPHGTCPICKC 298
>gi|7662486 ring finger protein 44 [Homo sapiens]
Length = 432
Score = 54.7 bits (130), Expect = 2e-07
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 382 SKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 441
+K I+ LP D Q +C +C S++ ++ LPC+H FH CV WL+ +
Sbjct: 356 TKADIEQLPSYRFNPDSHQSEQTLCV-VCFSDFEARQLLRVLPCNHEFHTKCVDKWLKAN 414
Query: 442 GTCPVCR 448
TCP+CR
Sbjct: 415 RTCPICR 421
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 53.9 bits (128), Expect = 3e-07
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 342 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 401
V P F + +E+ + E L E L E +K I+ LP ++
Sbjct: 319 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 375
Query: 402 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 448
Q +C +C ++ ++ LPC+H FH CV WL+ + TCP+CR
Sbjct: 376 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 53.9 bits (128), Expect = 3e-07
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 342 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 401
V P F + +E+ + E L E L E +K I+ LP ++
Sbjct: 319 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 375
Query: 402 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 448
Q +C +C ++ ++ LPC+H FH CV WL+ + TCP+CR
Sbjct: 376 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 53.9 bits (128), Expect = 3e-07
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 342 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 401
V P F + +E+ + E L E L E +K I+ LP ++
Sbjct: 352 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 408
Query: 402 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 448
Q +C +C ++ ++ LPC+H FH CV WL+ + TCP+CR
Sbjct: 409 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 454
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 53.9 bits (128), Expect = 3e-07
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 342 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 401
V P F + +E+ + E L E L E +K I+ LP ++
Sbjct: 319 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 375
Query: 402 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 448
Q +C +C ++ ++ LPC+H FH CV WL+ + TCP+CR
Sbjct: 376 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
Length = 515
Score = 53.9 bits (128), Expect = 3e-07
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 342 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 401
V P F + +E+ + E L E L E +K I+ LP ++
Sbjct: 402 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 458
Query: 402 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 448
Q +C +C ++ ++ LPC+H FH CV WL+ + TCP+CR
Sbjct: 459 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 504
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 53.1 bits (126), Expect = 5e-07
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 407 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 448
C +C Y + +V LPC H FHK CV WL + TCP+C+
Sbjct: 264 CAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCK 305
>gi|150378447 zinc and ring finger 3 [Homo sapiens]
Length = 836
Score = 52.8 bits (125), Expect = 7e-07
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 407 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 448
C IC +Y+ GE +PC H FH+ CV WL + TCP CR
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCR 234
>gi|37675277 ring finger protein 148 [Homo sapiens]
Length = 305
Score = 52.4 bits (124), Expect = 9e-07
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 383 KESIDALP-EILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 441
K++ID L +L D E C +C Y +V L C H+FHK C+ WL
Sbjct: 233 KKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAH 292
Query: 442 GTCPVCRC 449
TCP+C+C
Sbjct: 293 RTCPMCKC 300
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 52.0 bits (123), Expect = 1e-06
Identities = 27/62 (43%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 387 DALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPV 446
DA PE L D+ C IC E V G A LPC+H FH C+ W Q+ TCP
Sbjct: 278 DATPEELQAMDN-------VCIICREEMVTG--AKRLPCNHIFHTSCLRSWFQRQQTCPT 328
Query: 447 CR 448
CR
Sbjct: 329 CR 330
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 52.0 bits (123), Expect = 1e-06
Identities = 27/62 (43%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 387 DALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPV 446
DA PE L D+ C IC E V G A LPC+H FH C+ W Q+ TCP
Sbjct: 278 DATPEELQAMDN-------VCIICREEMVTG--AKRLPCNHIFHTSCLRSWFQRQQTCPT 328
Query: 447 CR 448
CR
Sbjct: 329 CR 330
>gi|14149702 ring finger protein 167 [Homo sapiens]
Length = 350
Score = 52.0 bits (123), Expect = 1e-06
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 382 SKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL-QK 440
+KE + +P T D+ Q C IC EY G+ LPC H +H CV WL Q
Sbjct: 209 TKEQLKQIP----THDYQKGDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQT 264
Query: 441 SGTCPVCR 448
TCP+C+
Sbjct: 265 RKTCPICK 272
>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
Length = 428
Score = 50.8 bits (120), Expect = 2e-06
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 407 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRC 449
C +C Y ++ L C+H FHK CV WL + TCP+C+C
Sbjct: 277 CAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKC 319
>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
Length = 402
Score = 50.8 bits (120), Expect = 2e-06
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 407 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRC 449
C +C Y ++ L C+H FHK CV WL + TCP+C+C
Sbjct: 251 CAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKC 293
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 50.8 bits (120), Expect = 2e-06
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 407 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 448
C +C Y +V LPC H FHK CV WL TCP+C+
Sbjct: 278 CAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCK 319
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,865,922
Number of Sequences: 37866
Number of extensions: 1049204
Number of successful extensions: 7585
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 331
Number of HSP's that attempted gapping in prelim test: 6665
Number of HSP's gapped (non-prelim): 1053
length of query: 455
length of database: 18,247,518
effective HSP length: 106
effective length of query: 349
effective length of database: 14,233,722
effective search space: 4967568978
effective search space used: 4967568978
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.