Guide to the Human Genome
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Name: PRKD3 Sequence: fasta or formatted (890aa) NCBI GI: 5031689
Description:

protein kinase D3

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         40           2
 C cysteine            2.7         24           1
 D aspartate           5.6         50           2
 E glutamate           6.4         57           2
 F phenylalanine       3.9         35           2
 G glycine             5.3         47           2
 H histidine           3.1         28           2
 I isoleucine          5.8         52           2
 K lysine              5.5         49           1
 L leucine             8.4         75           2
 M methionine          2.9         26           1
 N asparagine          4.6         41           2
 P proline             6.4         57           2
 Q glutamine           3.7         33           1
 R arginine            5.6         50           2
 S serine              9.4         84           2
 T threonine           4.7         42           1
 V valine              7.2         64           2
 W tryptophan          1.2         11           1
 Y tyrosine            2.8         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein kinase D3 
PRKD1                 0.672   protein kinase D1 
PRKD2                 0.608   protein kinase D2 isoform A 
PRKD2                 0.608   protein kinase D2 isoform A 
PRKD2                 0.608   protein kinase D2 isoform A 
PRKD2                 0.521   protein kinase D2 isoform B 
CHEK2                 0.092   protein kinase CHK2 isoform c 
CHEK2                 0.092   protein kinase CHK2 isoform a 
DCLK3                 0.086   doublecortin-like kinase 3 
CAMK1D                0.082   calcium/calmodulin-dependent protein kinase ID isofor...
CAMK1D                0.082   calcium/calmodulin-dependent protein kinase ID isofo...
CAMK1G                0.080   calcium/calmodulin-dependent protein kinase IG [Homo...
DCLK2                 0.079   doublecortin-like kinase 2 isoform b 
DCLK2                 0.079   doublecortin-like kinase 2 isoform a 
CAMK4                 0.079   calcium/calmodulin-dependent protein kinase IV 
CAMK1                 0.078   calcium/calmodulin-dependent protein kinase I 
PNCK                  0.075   pregnancy upregulated non-ubiquitously expressed Ca...
PNCK                  0.074   pregnancy upregulated non-ubiquitously expressed Ca...
CAMK2D                0.073   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.073   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.073   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.073   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.073   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.073   calcium/calmodulin-dependent protein kinase II delta...
DCLK1                 0.071   doublecortin-like kinase 1 
ULK2                  0.071   unc-51-like kinase 2 
ULK2                  0.071   unc-51-like kinase 2 
CAMK2A                0.071   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2A                0.071   calcium/calmodulin-dependent protein kinase II alpha...
PSKH1                 0.071   protein serine kinase H1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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