Guide to the Human Genome
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Search of human proteins with 21450832

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21450832 spindle and KT associated 1 [Homo sapiens]
         (255 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21450832 spindle and KT associated 1 [Homo sapiens]                513   e-146
gi|88014625 spindle and KT associated 1 [Homo sapiens]                513   e-146
gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens]                    37   0.022
gi|23503243 Ras association (RalGDS/AF-6) domain family (N-termi...    36   0.037
gi|154354990 ankyrin repeat domain 26 [Homo sapiens]                   35   0.063
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo...    34   0.11 
gi|169166591 PREDICTED: similar to hCG1640714 [Homo sapiens]           33   0.24 
gi|169167309 PREDICTED: similar to hCG1640714 [Homo sapiens]           33   0.24 
gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom...    33   0.32 
gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo...    33   0.32 
gi|31621309 leucine rich repeat containing 6 [Homo sapiens]            33   0.32 
gi|34482047 adaptor-related protein complex 3, beta 2 subunit [H...    32   0.41 
gi|16262452 cingulin [Homo sapiens]                                    32   0.41 
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho...    32   0.41 
gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo...    32   0.54 
gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo...    32   0.54 
gi|4504035 guanine monophosphate synthetase [Homo sapiens]             32   0.54 
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]                    32   0.54 
gi|151301215 widely-interspaced zinc finger motifs [Homo sapiens]      32   0.54 
gi|118498356 kinectin 1 isoform a [Homo sapiens]                       32   0.70 
gi|118498368 kinectin 1 isoform c [Homo sapiens]                       32   0.70 
gi|33620775 kinectin 1 isoform a [Homo sapiens]                        32   0.70 
gi|58530842 desmoplakin isoform II [Homo sapiens]                      32   0.70 
gi|32698688 citron [Homo sapiens]                                      32   0.70 
gi|223555975 tropomyosin 4 isoform 1 [Homo sapiens]                    31   0.92 
gi|4507651 tropomyosin 4 isoform 2 [Homo sapiens]                      31   0.92 
gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo s...    31   0.92 
gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo sa...    31   0.92 
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho...    31   0.92 
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho...    31   0.92 

>gi|21450832 spindle and KT associated 1 [Homo sapiens]
          Length = 255

 Score =  513 bits (1320), Expect = e-146
 Identities = 255/255 (100%), Positives = 255/255 (100%)

Query: 1   MASSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEI 60
           MASSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEI
Sbjct: 1   MASSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEI 60

Query: 61  QYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEPIKVEE 120
           QYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEPIKVEE
Sbjct: 61  QYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEPIKVEE 120

Query: 121 PEPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVISKYKILH 180
           PEPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVISKYKILH
Sbjct: 121 PEPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVISKYKILH 180

Query: 181 QPKKSMNSVTRNLYHRFIDEETKDTKGRYFIVEADIKEFTTLKADKKFHVLLNILRHCRR 240
           QPKKSMNSVTRNLYHRFIDEETKDTKGRYFIVEADIKEFTTLKADKKFHVLLNILRHCRR
Sbjct: 181 QPKKSMNSVTRNLYHRFIDEETKDTKGRYFIVEADIKEFTTLKADKKFHVLLNILRHCRR 240

Query: 241 LSEVRGGGLTRYVIT 255
           LSEVRGGGLTRYVIT
Sbjct: 241 LSEVRGGGLTRYVIT 255


>gi|88014625 spindle and KT associated 1 [Homo sapiens]
          Length = 255

 Score =  513 bits (1320), Expect = e-146
 Identities = 255/255 (100%), Positives = 255/255 (100%)

Query: 1   MASSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEI 60
           MASSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEI
Sbjct: 1   MASSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEI 60

Query: 61  QYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEPIKVEE 120
           QYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEPIKVEE
Sbjct: 61  QYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEPIKVEE 120

Query: 121 PEPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVISKYKILH 180
           PEPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVISKYKILH
Sbjct: 121 PEPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVISKYKILH 180

Query: 181 QPKKSMNSVTRNLYHRFIDEETKDTKGRYFIVEADIKEFTTLKADKKFHVLLNILRHCRR 240
           QPKKSMNSVTRNLYHRFIDEETKDTKGRYFIVEADIKEFTTLKADKKFHVLLNILRHCRR
Sbjct: 181 QPKKSMNSVTRNLYHRFIDEETKDTKGRYFIVEADIKEFTTLKADKKFHVLLNILRHCRR 240

Query: 241 LSEVRGGGLTRYVIT 255
           LSEVRGGGLTRYVIT
Sbjct: 241 LSEVRGGGLTRYVIT 255


>gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens]
          Length = 898

 Score = 36.6 bits (83), Expect = 0.022
 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 5   DLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQYQE 64
           +LE L     E +  ++   +   C ++  L+T      DE+    E++N+ + EIQ   
Sbjct: 483 ELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTE-----DELSKYKEIINRQKAEIQNLL 537

Query: 65  QTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGS 108
               +  +L E L+   ++IE+LKE V S    +   Q  ++GS
Sbjct: 538 DKVKTADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGS 581



 Score = 30.4 bits (67), Expect = 1.6
 Identities = 18/90 (20%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 42  IGDEIIVINELLNKLELEIQYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVT 101
           I   +I +    NKL+ E+   ++T + LKE    L +  ++ + +++N    +     +
Sbjct: 385 INSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQES 444

Query: 102 QSCVKGSDLDPEEPIKVEEPEPVKKPPKEQ 131
           +  +K ++LD +  +   E E   +   +Q
Sbjct: 445 EE-IKSNELDAKLRVTKGELEKQMQEKSDQ 473



 Score = 28.1 bits (61), Expect = 7.8
 Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%)

Query: 50  NELLNKLELEIQYQEQTNNSLKELCESLEED----YKDIEHLKENVPSHLPQVTVTQSCV 105
           N+ L K   +I+   Q    L +L E+ E +     ++I+ LKE++ SH+ +V   Q+ +
Sbjct: 340 NKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDINSHVIKVKWAQNKL 399

Query: 106 KGSDLDPEEPIKVEEPEPVKK 126
           K +++D  +  K +  E   K
Sbjct: 400 K-AEMDSHKETKDKLKETTTK 419


>gi|23503243 Ras association (RalGDS/AF-6) domain family
           (N-terminal) member 8 [Homo sapiens]
          Length = 392

 Score = 35.8 bits (81), Expect = 0.037
 Identities = 45/246 (18%), Positives = 106/246 (43%), Gaps = 26/246 (10%)

Query: 3   SSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQY 62
           + +L++L     EK+ +I+K L           +   + + +EI+ + + + + ++EI+ 
Sbjct: 163 ADELKKLIRLQTEKLQSIEKQLESNEIEIRFWEQKYNSNLEEEIVRLEQKIKRNDVEIEE 222

Query: 63  QEQTNNSL-------KELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPE-E 114
           +E   N L       K+L + L+E  + I   +  +  +L Q+   +S ++   L  E +
Sbjct: 223 EEFWENELQIEQENEKQLKDQLQEIRQKITECENKLKDYLAQIRTMESGLEAEKLQREVQ 282

Query: 115 PIKVEEPEPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVIS 174
             +V E E   K  K +  I         +  G  S         ++ + IK + +++  
Sbjct: 283 EAQVNEEEVKGKIGKVKGEI---------DIQGQQSL--------RLENGIKAVERSLGQ 325

Query: 175 KYKILHQPKKSMNSVTRNLYHRFIDEETKDTKGRYFIVEADIKEFTTLKAD-KKFHVLLN 233
             K L   ++ +  +T+ L    + +  + T  +  ++ A+  E     AD ++  ++L+
Sbjct: 326 ATKRLQDKEQELEQLTKELRQVNLQQFIQQTGTKVTVLPAEPIEIEASHADIERGIIILS 385

Query: 234 ILRHCR 239
             + C+
Sbjct: 386 DKQECK 391


>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
          Length = 1710

 Score = 35.0 bits (79), Expect = 0.063
 Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 13/157 (8%)

Query: 60   IQYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEPIKVE 119
            +Q +  +  ++++ CE L+++ K +E    N+ SH+ +  V    VK    + EE  + E
Sbjct: 1430 LQEELLSMKTVQKKCEKLQKNKKKLEQEVINLRSHIERNMVELGQVKQYKQEIEERARQE 1489

Query: 120  EPEPVKKP----PKEQRSIKEMPFITCDEFNGVPSYMKSRL-----TYNQINDVIKEINK 170
              E +K+       +  S + +     + F  + S M+ R+       ++I    ++ NK
Sbjct: 1490 IAEKLKEVNLFLQAQAASQENLEQFRENNFASMKSQMELRIKDLESELSKIKTSQEDFNK 1549

Query: 171  AVISKYKILH----QPKKSMNSVTRNLYHRFIDEETK 203
              + KYK L+    + +KS++S       R  +  TK
Sbjct: 1550 TELEKYKQLYLEELKVRKSLSSKLTKTNERLAEVNTK 1586


>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
            sapiens]
          Length = 1939

 Score = 34.3 bits (77), Expect = 0.11
 Identities = 32/165 (19%), Positives = 78/165 (47%), Gaps = 18/165 (10%)

Query: 59   EIQYQEQTNNSLKELCESLEEDYKDIEHLKEN-----VPSHLPQVTVTQSCVKGSDLDPE 113
            E++ ++ T+  L+ + ++LE+  KD++H  +      +     Q+   ++ V+  + + E
Sbjct: 1772 ELKKEQDTSAHLERMKKNLEQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVRELEGEVE 1831

Query: 114  EPIKVEEPEPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVI 173
               K    E VK   K +R +KE+ + T ++          R    ++ D++ ++ +A +
Sbjct: 1832 SEQK-RNVEAVKGLRKHERKVKELTYQTEED----------RKNILRLQDLVDKL-QAKV 1879

Query: 174  SKYKILHQPKKSMNSVTRNLYHRFIDEETKDTKGRYFIVEADIKE 218
              YK   +  +  ++V  + + R I  E ++ + R  I E+ + +
Sbjct: 1880 KSYKRQAEEAEEQSNVNLSKFRR-IQHELEEAEERADIAESQVNK 1923


>gi|169166591 PREDICTED: similar to hCG1640714 [Homo sapiens]
          Length = 597

 Score = 33.1 bits (74), Expect = 0.24
 Identities = 15/49 (30%), Positives = 26/49 (53%)

Query: 122 EPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINK 170
           +P++K P  QRS+    FIT D   G+P+   + +    +  ++ EI K
Sbjct: 266 DPLQKQPSCQRSVVIRTFITSDSLTGIPATPGNEIPVEVVLKMVTEIKK 314


>gi|169167309 PREDICTED: similar to hCG1640714 [Homo sapiens]
          Length = 597

 Score = 33.1 bits (74), Expect = 0.24
 Identities = 15/49 (30%), Positives = 26/49 (53%)

Query: 122 EPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINK 170
           +P++K P  QRS+    FIT D   G+P+   + +    +  ++ EI K
Sbjct: 266 DPLQKQPSCQRSVVIRTFITSDSLTGIPATPGNEIPVEVVLKMVTEIKK 314


>gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Homo
           sapiens]
          Length = 728

 Score = 32.7 bits (73), Expect = 0.32
 Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 51  ELLNKLELEIQYQEQTNNSLKEL-CESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSD 109
           EL  ++ ++ +Y++   +   E+  ES EED  D +   E  PS L Q T  Q   +GSD
Sbjct: 238 ELGARILIQERYEKFGESEEVEMEVESDEED--DKQEKAEEPPSQLDQDTQVQDMDEGSD 295

Query: 110 LDPEEPIKVEEPEPVKKPP 128
            D EE  KV  P     PP
Sbjct: 296 -DEEEGQKVPPPPETPMPP 313


>gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo
           sapiens]
          Length = 793

 Score = 32.7 bits (73), Expect = 0.32
 Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 51  ELLNKLELEIQYQEQTNNSLKEL-CESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSD 109
           EL  ++ ++ +Y++   +   E+  ES EED  D +   E  PS L Q T  Q   +GSD
Sbjct: 303 ELGARILIQERYEKFGESEEVEMEVESDEED--DKQEKAEEPPSQLDQDTQVQDMDEGSD 360

Query: 110 LDPEEPIKVEEPEPVKKPP 128
            D EE  KV  P     PP
Sbjct: 361 -DEEEGQKVPPPPETPMPP 378


>gi|31621309 leucine rich repeat containing 6 [Homo sapiens]
          Length = 466

 Score = 32.7 bits (73), Expect = 0.32
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 19/124 (15%)

Query: 4   SDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQYQ 63
           S L++L  ++N  + NI+K  +L  C +   L   +N IG E+  I  L           
Sbjct: 63  SKLKKL-EYLNLALNNIEKIENLEGCEELAKLDLTVNFIG-ELSSIKNL----------- 109

Query: 64  EQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEPIKVEEPEP 123
            Q N  LKEL   +       +H +E V + LPQ+      + G +++P E IK  +   
Sbjct: 110 -QHNIHLKELF-LMGNPCASFDHYREFVVATLPQL----KWLDGKEIEPSERIKALQDYS 163

Query: 124 VKKP 127
           V +P
Sbjct: 164 VIEP 167


>gi|34482047 adaptor-related protein complex 3, beta 2 subunit [Homo
           sapiens]
          Length = 1082

 Score = 32.3 bits (72), Expect = 0.41
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 77  LEEDYKDIEHLKENVPSHLPQVTVT--QSCVKGSDLDPEEPIK-VEEPEPVKKPPKEQRS 133
           LE  +KD +H +    SHL     T  Q      +  P+  ++ VE PE  K   +E+R 
Sbjct: 612 LESSFKDRDHFQLGSLSHLLNAKATGYQELPDWPEEAPDPSVRNVEVPEWTKCSNREKRK 671

Query: 134 IKEMPFITCDEFNGVPS 150
            KE PF +  E    P+
Sbjct: 672 EKEKPFYSDSEGESGPT 688


>gi|16262452 cingulin [Homo sapiens]
          Length = 1203

 Score = 32.3 bits (72), Expect = 0.41
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 8/78 (10%)

Query: 3    SSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQY 62
            S  +E    HVN++    K  LSLR       LK  +++  +EI  ++ L  K + E++ 
Sbjct: 1086 SIQIEDERQHVNDQ----KDQLSLR----VKALKRQVDEAEEEIERLDGLRKKAQREVEE 1137

Query: 63   QEQTNNSLKELCESLEED 80
            Q + N  L+   +SLE+D
Sbjct: 1138 QHEVNEQLQARIKSLEKD 1155


>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
            sapiens]
          Length = 3549

 Score = 32.3 bits (72), Expect = 0.41
 Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 4/118 (3%)

Query: 31   QEPTLKTVLNKIGDEIIVINELLNKLELEIQYQEQTNNSLKELCESL--EEDYKDIEHLK 88
            Q P +    ++IGD  +   +L+N+   EIQ +E     L+ +  +L  + D  + E L 
Sbjct: 1566 QAPGIIIEADEIGDVRMAKYKLMNQASPEIQKEEIIRADLRNIMVNLLSKRDCTEREILI 1625

Query: 89   ENVPSHLPQVTVTQSCVKGSDL--DPEEPIKVEEPEPVKKPPKEQRSIKEMPFITCDE 144
                     +T TQ   + ++   + EE +K +  + +K    E+RS+K+   I  DE
Sbjct: 1626 SEEEKGNVNLTKTQLLNRSTEFHAEKEEIVKGDVQQAIKNLFSEERSVKKGILIQEDE 1683


>gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo
            sapiens]
          Length = 1591

 Score = 32.0 bits (71), Expect = 0.54
 Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 10/77 (12%)

Query: 6    LEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLN--KIGDEIIVINELLNKLELEIQYQ 63
            LE+     NE++ N++ +L      Q+    TVL   K+  E I IN+L +KL+  +Q Q
Sbjct: 1306 LEEQEKRKNEEMQNVRTSLIAE---QQTNFNTVLTREKMRKENI-INDLSDKLKSTMQQQ 1361

Query: 64   EQTNNSLKELCESLEED 80
            E+     K+L ESL ED
Sbjct: 1362 ERD----KDLIESLSED 1374


>gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo
            sapiens]
          Length = 1594

 Score = 32.0 bits (71), Expect = 0.54
 Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 10/77 (12%)

Query: 6    LEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLN--KIGDEIIVINELLNKLELEIQYQ 63
            LE+     NE++ N++ +L      Q+    TVL   K+  E I IN+L +KL+  +Q Q
Sbjct: 1306 LEEQEKRKNEEMQNVRTSLIAE---QQTNFNTVLTREKMRKENI-INDLSDKLKSTMQQQ 1361

Query: 64   EQTNNSLKELCESLEED 80
            E+     K+L ESL ED
Sbjct: 1362 ERD----KDLIESLSED 1374


>gi|4504035 guanine monophosphate synthetase [Homo sapiens]
          Length = 693

 Score = 32.0 bits (71), Expect = 0.54
 Identities = 15/49 (30%), Positives = 26/49 (53%)

Query: 122 EPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINK 170
           +P++K P  QRS+    FIT D   G+P+   + +    +  ++ EI K
Sbjct: 623 DPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVEVVLKMVTEIKK 671


>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
          Length = 1780

 Score = 32.0 bits (71), Expect = 0.54
 Identities = 36/176 (20%), Positives = 71/176 (40%), Gaps = 21/176 (11%)

Query: 5    DLEQLCSHVNEKIGNIK----KTLSLRNCGQEPT-----LKTVLNKIGDEIIVINELLNK 55
            +L++   H+ + + N K    K L L+    + T     +K +L    +E     +   K
Sbjct: 1160 NLKEFQEHLQDSVKNTKDLNVKELKLKEEITQLTNNLQDMKHLLQLKEEEEETNRQETEK 1219

Query: 56   LELEIQYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEP 115
            L+ E+        +LK   +  EEDY D++    +    + QV    S ++  D D    
Sbjct: 1220 LKEELSASSARTQNLKADLQRKEEDYADLKEKLTDAKKQIKQVQKEVSVMR--DEDKLLR 1277

Query: 116  IKVEEPEPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKA 171
            IK+ E E  K    ++  +K+               +K +L   ++ + I++  +A
Sbjct: 1278 IKINELEKKKNQCSQELDMKQRTI----------QQLKEQLNNQKVEEAIQQYERA 1323


>gi|151301215 widely-interspaced zinc finger motifs [Homo sapiens]
          Length = 794

 Score = 32.0 bits (71), Expect = 0.54
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)

Query: 74  CESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEPIKVEEPEP--VKKPP 128
           CE   E +++ + L  +  SHL Q+ VT+  V GS +D    I  ++ +P  +KK P
Sbjct: 372 CEFCGEFFENRKGLSSHARSHLRQMGVTEWSVNGSPIDTLREILKKKSKPCLIKKEP 428



 Score = 28.5 bits (62), Expect = 5.9
 Identities = 13/50 (26%), Positives = 29/50 (58%)

Query: 62  YQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLD 111
           +++ +++S +  CE     +++ + L  +  +HL Q  VT+ CV GS ++
Sbjct: 530 HEKTSHSSTEACCELCGLYFENRKALASHARAHLRQFGVTEWCVNGSPIE 579


>gi|118498356 kinectin 1 isoform a [Homo sapiens]
          Length = 1357

 Score = 31.6 bits (70), Expect = 0.70
 Identities = 20/75 (26%), Positives = 41/75 (54%)

Query: 35  LKTVLNKIGDEIIVINELLNKLELEIQYQEQTNNSLKELCESLEEDYKDIEHLKENVPSH 94
           LK V+++   +I  + ELL    L++  +E+T   LK+  ++L+E+  +++  K    S 
Sbjct: 799 LKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSI 858

Query: 95  LPQVTVTQSCVKGSD 109
             +V   Q+ +KG +
Sbjct: 859 TSKVQELQNLLKGKE 873


>gi|118498368 kinectin 1 isoform c [Homo sapiens]
          Length = 1300

 Score = 31.6 bits (70), Expect = 0.70
 Identities = 20/75 (26%), Positives = 41/75 (54%)

Query: 35  LKTVLNKIGDEIIVINELLNKLELEIQYQEQTNNSLKELCESLEEDYKDIEHLKENVPSH 94
           LK V+++   +I  + ELL    L++  +E+T   LK+  ++L+E+  +++  K    S 
Sbjct: 799 LKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSI 858

Query: 95  LPQVTVTQSCVKGSD 109
             +V   Q+ +KG +
Sbjct: 859 TSKVQELQNLLKGKE 873


>gi|33620775 kinectin 1 isoform a [Homo sapiens]
          Length = 1357

 Score = 31.6 bits (70), Expect = 0.70
 Identities = 20/75 (26%), Positives = 41/75 (54%)

Query: 35  LKTVLNKIGDEIIVINELLNKLELEIQYQEQTNNSLKELCESLEEDYKDIEHLKENVPSH 94
           LK V+++   +I  + ELL    L++  +E+T   LK+  ++L+E+  +++  K    S 
Sbjct: 799 LKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSI 858

Query: 95  LPQVTVTQSCVKGSD 109
             +V   Q+ +KG +
Sbjct: 859 TSKVQELQNLLKGKE 873


>gi|58530842 desmoplakin isoform II [Homo sapiens]
          Length = 2272

 Score = 31.6 bits (70), Expect = 0.70
 Identities = 33/185 (17%), Positives = 80/185 (43%), Gaps = 17/185 (9%)

Query: 10   CSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQYQEQTNNS 69
            CS    K+ ++++         + + K  L+K   +I  +NE + +L  EI+ +++   S
Sbjct: 1069 CSQFKAKLASLEELKRQAELDGK-SAKQNLDKCYGQIKELNEKITRLTYEIEDEKRRRKS 1127

Query: 70   LKELCESLEEDYKDIEHLKENVPSHLP-QVTVTQSCVKGSDLDPEEPIKVEEPEPVKKPP 128
            +++  +  + DY  ++  ++    +L  Q   ++  +K  + + E    + + E  +K  
Sbjct: 1128 VEDRFDQQKNDYDQLQKARQCEKENLGWQKLESEKAIKEKEYEIERLRVLLQEEGTRKRE 1187

Query: 129  KEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVISKYKILHQPKKSMNS 188
             E    K              +  + + + NQ   V++E  ++++ K K+L Q K  +  
Sbjct: 1188 YENELAK--------------ASNRIQESKNQCTQVVQE-RESLLVKIKVLEQDKARLQR 1232

Query: 189  VTRNL 193
            +   L
Sbjct: 1233 LEDEL 1237


>gi|32698688 citron [Homo sapiens]
          Length = 2027

 Score = 31.6 bits (70), Expect = 0.70
 Identities = 14/51 (27%), Positives = 28/51 (54%)

Query: 41   KIGDEIIVINELLNKLELEIQYQEQTNNSLKELCESLEEDYKDIEHLKENV 91
            ++  E+  +   + + E+++  Q+QT  +LK  C  LEE   D+E L + +
Sbjct: 986  QLRSEVDHLRREITEREMQLTSQKQTMEALKTTCTMLEEQVMDLEALNDEL 1036


>gi|223555975 tropomyosin 4 isoform 1 [Homo sapiens]
          Length = 284

 Score = 31.2 bits (69), Expect = 0.92
 Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 7/102 (6%)

Query: 7   EQLCSHVNEKIGNIKKTL-SLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQYQEQ 65
           E  C  + E++ N+   L SL    ++ + K   +K  +EI ++++ L + E   ++ E+
Sbjct: 187 ELKCGDLEEELKNVTNNLKSLEAASEKYSEKE--DKYEEEIKLLSDKLKEAETRAEFAER 244

Query: 66  TNNSLKELCESLEEDYKDIEHLKENVPSH--LPQVTVTQSCV 105
           T   L++  + LEE  K  +  +ENV  H  L Q     +C+
Sbjct: 245 TVAKLEKTIDDLEE--KLAQAKEENVGLHQTLDQTLNELNCI 284


>gi|4507651 tropomyosin 4 isoform 2 [Homo sapiens]
          Length = 248

 Score = 31.2 bits (69), Expect = 0.92
 Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 7/102 (6%)

Query: 7   EQLCSHVNEKIGNIKKTL-SLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQYQEQ 65
           E  C  + E++ N+   L SL    ++ + K   +K  +EI ++++ L + E   ++ E+
Sbjct: 151 ELKCGDLEEELKNVTNNLKSLEAASEKYSEKE--DKYEEEIKLLSDKLKEAETRAEFAER 208

Query: 66  TNNSLKELCESLEEDYKDIEHLKENVPSH--LPQVTVTQSCV 105
           T   L++  + LEE  K  +  +ENV  H  L Q     +C+
Sbjct: 209 TVAKLEKTIDDLEE--KLAQAKEENVGLHQTLDQTLNELNCI 248


>gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo
            sapiens]
          Length = 3118

 Score = 31.2 bits (69), Expect = 0.92
 Identities = 21/106 (19%), Positives = 49/106 (46%), Gaps = 3/106 (2%)

Query: 4    SDLEQLCSHVNEK---IGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEI 60
            ++ ++L + V E    +  +K  +   +      L+T+ + +G    + N+   KL+   
Sbjct: 1979 NEAKKLANDVKENEDHLNGLKTRIENADARNGDLLRTLNDTLGKLSAIPNDTAAKLQAVK 2038

Query: 61   QYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVK 106
                Q N++ K++   + E +++++ LK+N       V  T + VK
Sbjct: 2039 DKARQANDTAKDVLAQITELHQNLDGLKKNYNKLADSVAKTNAVVK 2084


>gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo
            sapiens]
          Length = 3122

 Score = 31.2 bits (69), Expect = 0.92
 Identities = 21/106 (19%), Positives = 49/106 (46%), Gaps = 3/106 (2%)

Query: 4    SDLEQLCSHVNEK---IGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEI 60
            ++ ++L + V E    +  +K  +   +      L+T+ + +G    + N+   KL+   
Sbjct: 1979 NEAKKLANDVKENEDHLNGLKTRIENADARNGDLLRTLNDTLGKLSAIPNDTAAKLQAVK 2038

Query: 61   QYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVK 106
                Q N++ K++   + E +++++ LK+N       V  T + VK
Sbjct: 2039 DKARQANDTAKDVLAQITELHQNLDGLKKNYNKLADSVAKTNAVVK 2084


>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
            sapiens]
          Length = 1972

 Score = 31.2 bits (69), Expect = 0.92
 Identities = 19/70 (27%), Positives = 36/70 (51%)

Query: 31   QEPTLKTVLNKIGDEIIVINELLNKLELEIQYQEQTNNSLKELCESLEEDYKDIEHLKEN 90
            ++ T +  + K+ DEI+V+++  NKL  E +  E+  + L       EE  K++  LK  
Sbjct: 972  EKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLKNK 1031

Query: 91   VPSHLPQVTV 100
              S + ++ V
Sbjct: 1032 HESMISELEV 1041


>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
            sapiens]
          Length = 1979

 Score = 31.2 bits (69), Expect = 0.92
 Identities = 19/70 (27%), Positives = 36/70 (51%)

Query: 31   QEPTLKTVLNKIGDEIIVINELLNKLELEIQYQEQTNNSLKELCESLEEDYKDIEHLKEN 90
            ++ T +  + K+ DEI+V+++  NKL  E +  E+  + L       EE  K++  LK  
Sbjct: 979  EKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLKNK 1038

Query: 91   VPSHLPQVTV 100
              S + ++ V
Sbjct: 1039 HESMISELEV 1048


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.133    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,640,638
Number of Sequences: 37866
Number of extensions: 448937
Number of successful extensions: 2264
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 2113
Number of HSP's gapped (non-prelim): 241
length of query: 255
length of database: 18,247,518
effective HSP length: 100
effective length of query: 155
effective length of database: 14,460,918
effective search space: 2241442290
effective search space used: 2241442290
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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