Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 21450659
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21450659 RIB43A domain with coiled-coils 1 isoform 2 [Homo
sapiens]
(192 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21450659 RIB43A domain with coiled-coils 1 isoform 2 [Homo sa... 388 e-108
gi|72534784 RIB43A domain with coiled-coils 1 isoform 1 [Homo sa... 363 e-101
gi|241666448 RIB43A domain with coiled-coils 2 [Homo sapiens] 94 7e-20
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 37 0.013
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 37 0.013
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 35 0.039
gi|48762942 huntingtin interacting protein-1-related [Homo sapiens] 35 0.051
gi|239750456 PREDICTED: similar to KIAA0655 protein [Homo sapiens] 35 0.051
gi|41152097 DNA segment on chromosome X and Y (unique) 155 expre... 35 0.051
gi|169167715 PREDICTED: hypothetical protein [Homo sapiens] 34 0.067
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 34 0.087
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap... 33 0.11
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap... 33 0.11
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap... 33 0.11
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi... 33 0.11
gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapi... 33 0.11
gi|126362971 serine/threonine kinase 10 [Homo sapiens] 33 0.11
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa... 33 0.15
gi|48255881 troponin T type 2, cardiac isoform 3 [Homo sapiens] 33 0.19
gi|48255877 troponin T type 2, cardiac isoform 1 [Homo sapiens] 33 0.19
gi|148746195 trichohyalin [Homo sapiens] 33 0.19
gi|7661936 scaffold attachment factor B2 [Homo sapiens] 33 0.19
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 32 0.33
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 32 0.33
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 32 0.33
gi|109452611 chromosome 14 open reading frame 140 isoform a [Hom... 32 0.33
gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens] 32 0.33
gi|41281453 serine/threonine kinase 2 [Homo sapiens] 32 0.43
gi|4505101 microtubule-associated protein 7 [Homo sapiens] 32 0.43
gi|225579095 S-phase cyclin A-associated protein in the ER isofo... 31 0.57
>gi|21450659 RIB43A domain with coiled-coils 1 isoform 2 [Homo
sapiens]
Length = 192
Score = 388 bits (996), Expect = e-108
Identities = 192/192 (100%), Positives = 192/192 (100%)
Query: 1 MYNIKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAER 60
MYNIKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAER
Sbjct: 1 MYNIKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAER 60
Query: 61 SKEAAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVW 120
SKEAAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVW
Sbjct: 61 SKEAAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVW 120
Query: 121 KGLPTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQQAKVDENY 180
KGLPTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQQAKVDENY
Sbjct: 121 KGLPTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQQAKVDENY 180
Query: 181 TGKQPGPPDSET 192
TGKQPGPPDSET
Sbjct: 181 TGKQPGPPDSET 192
>gi|72534784 RIB43A domain with coiled-coils 1 isoform 1 [Homo
sapiens]
Length = 379
Score = 363 bits (933), Expect = e-101
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MYNIKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAER 60
MYNIKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAER
Sbjct: 1 MYNIKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAER 60
Query: 61 SKEAAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVW 120
SKEAAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVW
Sbjct: 61 SKEAAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVW 120
Query: 121 KGLPTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQQAKVDENY 180
KGLPTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQQAKVDENY
Sbjct: 121 KGLPTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQQAKVDENY 180
Query: 181 T 181
T
Sbjct: 181 T 181
>gi|241666448 RIB43A domain with coiled-coils 2 [Homo sapiens]
Length = 377
Score = 94.0 bits (232), Expect = 7e-20
Identities = 54/170 (31%), Positives = 94/170 (55%)
Query: 9 DTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGT 68
D ++ A + RR+ E RQ R FN RNR++G D +A + QV D+K +EA E+++ +
Sbjct: 8 DLRQDANLAKRRHAELCRQKRVFNARNRIIGGDTEAWDVQVHDQKIKEATEKARHETFAA 67
Query: 69 SQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGLPTYLS 128
Q D ++ +LE + + L + + +F++ Q+ + REF L DP + K LP S
Sbjct: 68 EMRQNDKIMCILENRKKRDRKNLCRAINDFQQSFQKPETRREFDLSDPLALKKDLPARQS 127
Query: 129 YSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQQAKVDE 178
++ + +Q F GEDL+ R + Q+ Q R +QQ+E + A+ ++
Sbjct: 128 DNDVRNTISGMQKFMGEDLNFHERKKFQEEQNREWSLQQQREWKNARAEQ 177
Score = 32.0 bits (71), Expect = 0.33
Identities = 36/171 (21%), Positives = 77/171 (45%), Gaps = 26/171 (15%)
Query: 20 RNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQVQYDVVVQM 79
R + +E QNR ++++ Q + K A ++ EA Y +++Q+D +
Sbjct: 151 RKKFQEEQNREWSLQ-------------QQREWKNARAEQKCAEALYTETRLQFDETAKH 197
Query: 80 LEKEEADRTRQLAKKVQEFRE---------QKQQLKNGREFSLWDPGQVWKG--LPTYLS 128
L+K E+ + + V++F + +KQ+ K +E +L + + +G L
Sbjct: 198 LQKLESTTRKAVCASVKDFNKSQAIESVERKKQEKKQEQEDNLAEITNLLRGDLLSENPQ 257
Query: 129 YSNTYPGPASL--QYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQQAKVD 177
+ + GP + + G ++ ++R+ Q Q R Q+E++Q +D
Sbjct: 258 QAASSFGPHRVVPDRWKGMTQEQLEQIRLVQKQQIQEKLRLQEEKRQRDLD 308
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 36.6 bits (83), Expect = 0.013
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 17/175 (9%)
Query: 5 KQSTDTKEAAAIEARRNREKE-RQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKE 63
K+ K+ +EARR +E+E R+ R+ + + ++ +K+ E ER ++
Sbjct: 624 KKKAAAKKMEEVEARRKQEEEARRLRWLQQEEE------ERRHQELLQKKKEEEQERLRK 677
Query: 64 AAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGL 123
AA ++ E+ E +R R+ ++ QE REQ+++ + RE Q +
Sbjct: 678 AAEAK---------RLAEQREQER-REQERREQERREQERREQERREQERQLAEQERRRE 727
Query: 124 PTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQQAKVDE 178
L E L R+ + ++ + + ERQ QE+Q+ K E
Sbjct: 728 QERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAKE 782
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 36.6 bits (83), Expect = 0.013
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 17/175 (9%)
Query: 5 KQSTDTKEAAAIEARRNREKE-RQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKE 63
K+ K+ +EARR +E+E R+ R+ + + ++ +K+ E ER ++
Sbjct: 620 KKKAAAKKMEEVEARRKQEEEARRLRWLQQEEE------ERRHQELLQKKKEEEQERLRK 673
Query: 64 AAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGL 123
AA ++ E+ E +R R+ ++ QE REQ+++ + RE Q +
Sbjct: 674 AAEAK---------RLAEQREQER-REQERREQERREQERREQERREQERQLAEQERRRE 723
Query: 124 PTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQQAKVDE 178
L E L R+ + ++ + + ERQ QE+Q+ K E
Sbjct: 724 QERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAKE 778
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 35.0 bits (79), Expect = 0.039
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 17 EARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQVQYDV- 75
E R RE+ER+ R + D + +R++ E R KEAAY +++
Sbjct: 408 EREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIR 467
Query: 76 ---VVQMLEKE---EADRTRQLAKKVQEFREQKQQLKNGRE 110
+ EKE E +R R++AK+ + +E + + R+
Sbjct: 468 ERKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRD 508
Score = 30.4 bits (67), Expect = 0.97
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 11 KEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQ 70
+E E R RE+ER+ R R D + DR R +R +E + ++
Sbjct: 320 RERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNK 379
Query: 71 VQYDVVVQMLEKE-EADRTRQLAKKVQEFREQKQQLKNGRE 110
+ + ++E E +R R+ ++ + RE++++ + RE
Sbjct: 380 DRSRSREKSRDRERERERERERERERERERERERERERERE 420
Score = 30.4 bits (67), Expect = 0.97
Identities = 38/197 (19%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 3 NIKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSK 62
N +S +++ E R RE+ER+ R R + + + ++ ++ E +
Sbjct: 378 NKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKRDREEDE 437
Query: 63 EAAYGTSQVQYDVVVQMLEKEEADRTR------QLAKKVQEFREQKQQLKNGREFSLWDP 116
E AY +++ ++ EKE A + R + KK +E+ ++ ++ + R +
Sbjct: 438 EDAYERRKLER----KLREKEAAYQERLKNWEIRERKKTREYEKEAEREEERRR----EM 489
Query: 117 GQVWKGLPTYL-SYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYN-LERQQQEQQQA 174
+ K L +L Y + P +Y+ G L + RLR ++ + + +R++++++
Sbjct: 490 AKEAKRLKEFLEDYDDDRDDP---KYYRGSALQK--RLRDREKEMEADERDRKREKEELE 544
Query: 175 KVDENYTGKQPGPPDSE 191
++ + + PD+E
Sbjct: 545 EIRQRLLAEGHPDPDAE 561
>gi|48762942 huntingtin interacting protein-1-related [Homo sapiens]
Length = 1068
Score = 34.7 bits (78), Expect = 0.051
Identities = 41/188 (21%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 11 KEAAAIEARRNREKERQNRFFNVRNRVMGVDVQ-ALNNQVGDRKRREAAERSKEAAYGTS 69
++A+A EAR N+ KE+ + +V ++ + A V + + E A ++ A+
Sbjct: 438 RKASATEARYNKLKEKHSELVHVHAELLRKNADTAKQLTVTQQSQEEVARVKEQLAFQVE 497
Query: 70 QVQYDVVVQMLEKEE--ADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGLPTYL 127
QV+ + +++ EK + R+L K E ++ L + + ++ L T
Sbjct: 498 QVKRESELKLEEKSDQLEKLKRELEAKAGELARAQEALSHTEQ----SKSELSSRLDTLS 553
Query: 128 SYSNTYPGPA---SLQYFSGEDLDRDT---------RLRMQQGQFRYNL-ERQQQEQ--Q 172
+ + G + + L R+T R +QG+ + L ER+ QEQ +
Sbjct: 554 AEKDALSGAVRQREADLLAAQSLVRETEAALSREQQRSSQEQGELQGRLAERESQEQGLR 613
Query: 173 QAKVDENY 180
Q +DE +
Sbjct: 614 QRLLDEQF 621
>gi|239750456 PREDICTED: similar to KIAA0655 protein [Homo sapiens]
Length = 1048
Score = 34.7 bits (78), Expect = 0.051
Identities = 41/188 (21%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 11 KEAAAIEARRNREKERQNRFFNVRNRVMGVDVQ-ALNNQVGDRKRREAAERSKEAAYGTS 69
++A+A EAR N+ KE+ + +V ++ + A V + + E A ++ A+
Sbjct: 418 RKASATEARYNKLKEKHSELVHVHAELLRKNADTAKQLTVTQQSQEEVARVKEQLAFQVE 477
Query: 70 QVQYDVVVQMLEKEE--ADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGLPTYL 127
QV+ + +++ EK + R+L K E ++ L + + ++ L T
Sbjct: 478 QVKRESELKLEEKSDQLEKLKRELEAKAGELARAQEALSHTEQ----SKSELSSRLDTLS 533
Query: 128 SYSNTYPGPA---SLQYFSGEDLDRDT---------RLRMQQGQFRYNL-ERQQQEQ--Q 172
+ + G + + L R+T R +QG+ + L ER+ QEQ +
Sbjct: 534 AEKDALSGAVRQREADLLAAQSLVRETEAALSREQQRSSQEQGELQGRLAERESQEQGLR 593
Query: 173 QAKVDENY 180
Q +DE +
Sbjct: 594 QRLLDEQF 601
>gi|41152097 DNA segment on chromosome X and Y (unique) 155
expressed sequence isoform 1 [Homo sapiens]
Length = 695
Score = 34.7 bits (78), Expect = 0.051
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 13/104 (12%)
Query: 3 NIKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSK 62
NIK S D+ + + + + R+ ERQ +Q L Q ++KRRE +
Sbjct: 252 NIKVSFDSTKHLSDASIKKRQLERQK-------------LQELEQQREEQKRREKEAEER 298
Query: 63 EAAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLK 106
+ A Q + + + + ++EE R R+ ++ +E R +++L+
Sbjct: 299 QRAEERKQKELEELERERKREEKLRKREQKQRDRELRRNQKKLE 342
>gi|169167715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 34.3 bits (77), Expect = 0.067
Identities = 22/107 (20%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 4 IKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKE 63
I++ D + E +R R+++R+ + R+R + Q + DRKR + ER ++
Sbjct: 84 IEKDRDRQRKRDRERQRWRDRDRKRERWGDRDRETETERQEERERQRDRKREKDRERQRQ 143
Query: 64 AAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGRE 110
G + + ++ +++ DR R++ + + +R+++++ + RE
Sbjct: 144 REIGIDKDR-----EIETEKDRDREREMG-ETERYRDRERERQKQRE 184
Score = 29.6 bits (65), Expect = 1.6
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 17 EARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQVQYDVV 76
E R RE+ERQ + R+R +++ + DR+R+ ER + + ++
Sbjct: 59 ERERQRERERQRKRAKERHREKDREIE----KDRDRQRKRDRERQRWRDRDRKRERWGDR 114
Query: 77 VQMLEKE-EADRTRQLAKKVQEFREQKQQLKNG 108
+ E E + +R RQ +K ++ RE+++Q + G
Sbjct: 115 DRETETERQEERERQRDRKREKDRERQRQREIG 147
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 33.9 bits (76), Expect = 0.087
Identities = 23/94 (24%), Positives = 41/94 (43%)
Query: 17 EARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQVQYDVV 76
E R R+++RQ RNR G + + + +R+R + ++E D
Sbjct: 338 EKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQ 397
Query: 77 VQMLEKEEADRTRQLAKKVQEFREQKQQLKNGRE 110
+ + E DR Q + Q RE+ ++ + GRE
Sbjct: 398 KERERQTEKDRDGQRETEKQREREKDRESERGRE 431
Score = 31.6 bits (70), Expect = 0.43
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 5 KQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEA 64
++ TD + E RNR+KER+ R G D Q + +R+R+ AE+ +E
Sbjct: 106 ERQTDRERDRQREKERNRQKERERE--TEREGERGRDRQTDGQR--ERERQRDAEKERER 161
Query: 65 AYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQ 104
Q D Q + + R+ K QE RE+++Q
Sbjct: 162 -------QTDRERQRQTERNRQKEREREKNRQERRERERQ 194
Score = 28.1 bits (61), Expect = 4.8
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 17 EARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEA---AYGTSQVQY 73
E +R+REKER+ + R+R + + + +R+ ER ++ + Q
Sbjct: 96 ERQRDREKERERQTDRERDRQR--EKERNRQKERERETEREGERGRDRQTDGQRERERQR 153
Query: 74 DVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGRE 110
D + + + +R RQ + Q+ RE+++ + RE
Sbjct: 154 DAEKERERQTDRERQRQTERNRQKEREREKNRQERRE 190
Score = 27.3 bits (59), Expect = 8.2
Identities = 18/106 (16%), Positives = 45/106 (42%)
Query: 5 KQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEA 64
K+ TD + + R REK+ + + R + + ++ DR RR+ +
Sbjct: 225 KRQTDRERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTD 284
Query: 65 AYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGRE 110
+ + D + + + +R R+ + + RE++++ + R+
Sbjct: 285 RKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQ 330
>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
sapiens]
Length = 1293
Score = 33.5 bits (75), Expect = 0.11
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 11 KEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRRE---AAERSKEAAYG 67
+E E R RE+E + R +R + + Q +RKRRE A R +E A
Sbjct: 733 QERREAEMRAKREEEERKRQEELRRQQEEI---LRRQQEEERKRREEEELARRKQEEALR 789
Query: 68 TSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGRE 110
+ Q + + E+EE + + ++++E R ++++ + E
Sbjct: 790 RQREQEIALRRQREEEERQQQEEALRRLEERRREEEERRKQEE 832
Score = 29.3 bits (64), Expect = 2.2
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 26/165 (15%)
Query: 11 KEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQ 70
+E AA AR E+E Q R R R M + L ++ +RKR+E
Sbjct: 838 EEEAAKWARE--EEEAQRRLEENRLR-MEEEAARLRHEEEERKRKE-------------- 880
Query: 71 VQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGLPTYLSYS 130
+++ ++E R RQ ++ +Q+QQ + + L + T S
Sbjct: 881 ------LEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTACQS 934
Query: 131 NTYPGPASLQYFSGEDLDRDTR--LRMQQGQFRYNLERQQQEQQQ 173
A +Q E+ +R R R QQ + L++QQQ+QQQ
Sbjct: 935 QATLSLAEIQKLE-EERERQLREEQRRQQRELMKALQQQQQQQQQ 978
Score = 28.5 bits (62), Expect = 3.7
Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 21/169 (12%)
Query: 4 IKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKE 63
++ + ++ +E +R +E RQ + + + + Q Q+ K ++ ++
Sbjct: 869 LRHEEEERKRKELEVQRQKELMRQRQ--QQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQ 926
Query: 64 AAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGL 123
+ Q Q + + ++K E +R RQL +E R Q+++L + Q G
Sbjct: 927 SNTTACQSQATLSLAEIQKLEEERERQLR---EEQRRQQRELMKALQQQQQQQQQKLSGW 983
Query: 124 PTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQ 172
S T + L +QQ + R ++QQQ+QQ
Sbjct: 984 GNVSKPSGT----------------TKSLLEIQQEEARQMQKQQQQQQQ 1016
>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo
sapiens]
Length = 1320
Score = 33.5 bits (75), Expect = 0.11
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 11 KEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRRE---AAERSKEAAYG 67
+E E R RE+E + R +R + + Q +RKRRE A R +E A
Sbjct: 760 QERREAEMRAKREEEERKRQEELRRQQEEI---LRRQQEEERKRREEEELARRKQEEALR 816
Query: 68 TSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGRE 110
+ Q + + E+EE + + ++++E R ++++ + E
Sbjct: 817 RQREQEIALRRQREEEERQQQEEALRRLEERRREEEERRKQEE 859
Score = 29.3 bits (64), Expect = 2.2
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 26/165 (15%)
Query: 11 KEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQ 70
+E AA AR E+E Q R R R M + L ++ +RKR+E
Sbjct: 865 EEEAAKWARE--EEEAQRRLEENRLR-MEEEAARLRHEEEERKRKE-------------- 907
Query: 71 VQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGLPTYLSYS 130
+++ ++E R RQ ++ +Q+QQ + + L + T S
Sbjct: 908 ------LEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTACQS 961
Query: 131 NTYPGPASLQYFSGEDLDRDTR--LRMQQGQFRYNLERQQQEQQQ 173
A +Q E+ +R R R QQ + L++QQQ+QQQ
Sbjct: 962 QATLSLAEIQKLE-EERERQLREEQRRQQRELMKALQQQQQQQQQ 1005
Score = 28.5 bits (62), Expect = 3.7
Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 21/169 (12%)
Query: 4 IKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKE 63
++ + ++ +E +R +E RQ + + + + Q Q+ K ++ ++
Sbjct: 896 LRHEEEERKRKELEVQRQKELMRQRQ--QQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQ 953
Query: 64 AAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGL 123
+ Q Q + + ++K E +R RQL +E R Q+++L + Q G
Sbjct: 954 SNTTACQSQATLSLAEIQKLEEERERQLR---EEQRRQQRELMKALQQQQQQQQQKLSGW 1010
Query: 124 PTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQ 172
S T + L +QQ + R ++QQQ+QQ
Sbjct: 1011 GNVSKPSGT----------------TKSLLEIQQEEARQMQKQQQQQQQ 1043
>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 33.5 bits (75), Expect = 0.11
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 11 KEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRRE---AAERSKEAAYG 67
+E E R RE+E + R +R + + Q +RKRRE A R +E A
Sbjct: 739 QERREAEMRAKREEEERKRQEELRRQQEEI---LRRQQEEERKRREEEELARRKQEEALR 795
Query: 68 TSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGRE 110
+ Q + + E+EE + + ++++E R ++++ + E
Sbjct: 796 RQREQEIALRRQREEEERQQQEEALRRLEERRREEEERRKQEE 838
Score = 29.3 bits (64), Expect = 2.2
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 26/165 (15%)
Query: 11 KEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQ 70
+E AA AR E+E Q R R R M + L ++ +RKR+E
Sbjct: 844 EEEAAKWARE--EEEAQRRLEENRLR-MEEEAARLRHEEEERKRKE-------------- 886
Query: 71 VQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGLPTYLSYS 130
+++ ++E R RQ ++ +Q+QQ + + L + T S
Sbjct: 887 ------LEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTACQS 940
Query: 131 NTYPGPASLQYFSGEDLDRDTR--LRMQQGQFRYNLERQQQEQQQ 173
A +Q E+ +R R R QQ + L++QQQ+QQQ
Sbjct: 941 QATLSLAEIQKLE-EERERQLREEQRRQQRELMKALQQQQQQQQQ 984
Score = 28.5 bits (62), Expect = 3.7
Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 21/169 (12%)
Query: 4 IKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKE 63
++ + ++ +E +R +E RQ + + + + Q Q+ K ++ ++
Sbjct: 875 LRHEEEERKRKELEVQRQKELMRQRQ--QQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQ 932
Query: 64 AAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGL 123
+ Q Q + + ++K E +R RQL +E R Q+++L + Q G
Sbjct: 933 SNTTACQSQATLSLAEIQKLEEERERQLR---EEQRRQQRELMKALQQQQQQQQQKLSGW 989
Query: 124 PTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQ 172
S T + L +QQ + R ++QQQ+QQ
Sbjct: 990 GNVSKPSGT----------------TKSLLEIQQEEARQMQKQQQQQQQ 1022
>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 33.5 bits (75), Expect = 0.11
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 11 KEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRRE---AAERSKEAAYG 67
+E E R RE+E + R +R + + Q +RKRRE A R +E A
Sbjct: 739 QERREAEMRAKREEEERKRQEELRRQQEEI---LRRQQEEERKRREEEELARRKQEEALR 795
Query: 68 TSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGRE 110
+ Q + + E+EE + + ++++E R ++++ + E
Sbjct: 796 RQREQEIALRRQREEEERQQQEEALRRLEERRREEEERRKQEE 838
Score = 29.3 bits (64), Expect = 2.2
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 26/165 (15%)
Query: 11 KEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQ 70
+E AA AR E+E Q R R R M + L ++ +RKR+E
Sbjct: 844 EEEAAKWARE--EEEAQRRLEENRLR-MEEEAARLRHEEEERKRKE-------------- 886
Query: 71 VQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGLPTYLSYS 130
+++ ++E R RQ ++ +Q+QQ + + L + T S
Sbjct: 887 ------LEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTACQS 940
Query: 131 NTYPGPASLQYFSGEDLDRDTR--LRMQQGQFRYNLERQQQEQQQ 173
A +Q E+ +R R R QQ + L++QQQ+QQQ
Sbjct: 941 QATLSLAEIQKLE-EERERQLREEQRRQQRELMKALQQQQQQQQQ 984
Score = 28.5 bits (62), Expect = 3.7
Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 21/169 (12%)
Query: 4 IKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKE 63
++ + ++ +E +R +E RQ + + + + Q Q+ K ++ ++
Sbjct: 875 LRHEEEERKRKELEVQRQKELMRQRQ--QQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQ 932
Query: 64 AAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGL 123
+ Q Q + + ++K E +R RQL +E R Q+++L + Q G
Sbjct: 933 SNTTACQSQATLSLAEIQKLEEERERQLR---EEQRRQQRELMKALQQQQQQQQQKLSGW 989
Query: 124 PTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQ 172
S T + L +QQ + R ++QQQ+QQ
Sbjct: 990 GNVSKPSGT----------------TKSLLEIQQEEARQMQKQQQQQQQ 1022
>gi|169218106 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 436
Score = 33.5 bits (75), Expect = 0.11
Identities = 35/173 (20%), Positives = 74/173 (42%), Gaps = 5/173 (2%)
Query: 17 EARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAE--RSKEAAYGTSQVQYD 74
E R +E++ + V+ + V Q + + + RE E R +E + Q +
Sbjct: 227 EQMRKQEEQMGEQEEQVQKQEEQVQKQEEQMRKQEEQMREQEEQMREQEEQMLKQKEQTE 286
Query: 75 VVVQMLEKEEADRTR--QLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGLPTYLSYSNT 132
Q E+EE R + Q+ ++ ++ REQ++Q++ E Q+W+
Sbjct: 287 QEEQTGEQEEQMREQEEQMREQEEQMREQEEQMREQEEQMGKQEEQMWEQKEQMWEQKEQ 346
Query: 133 YPGPASLQYFSGEDLDR-DTRLRMQQGQFRYNLERQQQEQQQAKVDENYTGKQ 184
E + + + ++R Q+ Q R E+ +++++Q + E G+Q
Sbjct: 347 MWKQEEQMGEQEEQMQKQEEQVRKQEEQMRKQEEQMRKQEEQMRKQEEQMGEQ 399
Score = 31.6 bits (70), Expect = 0.43
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Query: 1 MYNIKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAER 60
M K+ T+ +E + + RE+E Q R + R ++ Q+G K+ E
Sbjct: 278 MLKQKEQTEQEEQTGEQEEQMREQEEQMREQEEQMREQEEQMREQEEQMG--KQEEQMWE 335
Query: 61 SKEAAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQ 104
KE + + + QM E+EE + ++ + QE + +KQ+
Sbjct: 336 QKEQMWEQKEQMWKQEEQMGEQEEQMQKQEEQVRKQEEQMRKQE 379
Score = 28.5 bits (62), Expect = 3.7
Identities = 36/183 (19%), Positives = 77/183 (42%), Gaps = 20/183 (10%)
Query: 4 IKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKE 63
+K+ +T + + + RE+E Q R + R V+ QV + +E R +E
Sbjct: 37 LKRKLETDKIPLPQEGQVREQEGQVREQEGQVREQEGQVREQEGQV---REQEGQVREQE 93
Query: 64 AAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGL 123
+ Q V+ E + ++ Q+ ++ + REQ+ Q++ GQV +
Sbjct: 94 GQVREQEGQ----VREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQ- 148
Query: 124 PTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQQAKVDENYTGK 183
++ G+ +++ ++R Q+GQ R + ++++ Q + E G+
Sbjct: 149 ------------EGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQMGE 196
Query: 184 QPG 186
Q G
Sbjct: 197 QEG 199
>gi|126362971 serine/threonine kinase 10 [Homo sapiens]
Length = 968
Score = 33.5 bits (75), Expect = 0.11
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 17 EARRNR-EKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQV-QYD 74
EARR R E++R F + ++M +V+ ++ ++R+E+ ++ E Q+ D
Sbjct: 638 EARRIRLEQDRDYTRFQEQLKLMKKEVKNEVEKLPRQQRKESMKQKMEEHTQKKQLLDRD 697
Query: 75 VVVQMLEKEE-------ADRTRQLAKKVQEFREQKQQLKNGREFSLWD 115
V + E E D R++ K +E +KQ+L RE +LW+
Sbjct: 698 FVAKQKEDLELAMKRLTTDNRREICDKERECLMKKQELLRDREAALWE 745
>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
sapiens]
Length = 2997
Score = 33.1 bits (74), Expect = 0.15
Identities = 29/150 (19%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 12 EAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQV 71
E ++ RR+ + ++ R+ + L ++ D + +A +++ TSQ
Sbjct: 741 EDPGVQKRRSSRQVKRKRY-----------TEDLEFKISDEEADDADAAGRDSPSNTSQS 789
Query: 72 QYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGLPTYLSYSN 131
+ ++E D + +K+ R K+Q ++G E + + Y+ Y N
Sbjct: 790 E--------QQESVDAEGPVVEKIMSSRSVKKQKESGEEVEIEE---------FYVKYKN 832
Query: 132 TYPGPASLQYFSGEDLDRDTRLRMQQGQFR 161
Q+ S EDL++D R++ + +F+
Sbjct: 833 F--SYLHCQWASIEDLEKDKRIQQKIKRFK 860
>gi|48255881 troponin T type 2, cardiac isoform 3 [Homo sapiens]
Length = 285
Score = 32.7 bits (73), Expect = 0.19
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 1 MYNIKQSTDTKEAAAIEARR---NREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREA 57
+ ++K + + A E +R REKERQNR R R + + RR+A
Sbjct: 120 LVSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERAR-----------REEEENRRKA 168
Query: 58 AERSKEAAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQL 105
+ +++ ++ + + +Q E++ R + KK + E+++ L
Sbjct: 169 EDEARKKKALSNMMHFGGYIQKTERKSGKRQTEREKKKKILAERRKVL 216
>gi|48255877 troponin T type 2, cardiac isoform 1 [Homo sapiens]
Length = 295
Score = 32.7 bits (73), Expect = 0.19
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 1 MYNIKQSTDTKEAAAIEARR---NREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREA 57
+ ++K + + A E +R REKERQNR R R + + RR+A
Sbjct: 130 LVSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERAR-----------REEEENRRKA 178
Query: 58 AERSKEAAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQL 105
+ +++ ++ + + +Q E++ R + KK + E+++ L
Sbjct: 179 EDEARKKKALSNMMHFGGYIQKTERKSGKRQTEREKKKKILAERRKVL 226
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 32.7 bits (73), Expect = 0.19
Identities = 35/167 (20%), Positives = 68/167 (40%), Gaps = 23/167 (13%)
Query: 18 ARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQVQYDVVV 77
A + E+Q R + ++ + +R+ R A E ++ G ++
Sbjct: 149 AEGEEQSEKQERLEQRDRQRRDEELWRQRQEWQEREERRAEEEQLQSCKGHETEEFP--- 205
Query: 78 QMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLW--DPGQVWKGLPTYLSYSNTYPG 135
EE R R+L + ++ RE+KQQ + R+ ++ + + W+ T L
Sbjct: 206 ----DEEQLRRRELLELRRKGREEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEE---- 257
Query: 136 PASLQYFSGEDLDRDTRLRMQQGQFR------YNLERQQQEQQQAKV 176
+ E+ R L+ ++ Q R ERQ++EQQQ ++
Sbjct: 258 ----EKLQEEEPQRQRELQEEEEQLRKLERQELRRERQEEEQQQQRL 300
Score = 32.7 bits (73), Expect = 0.19
Identities = 36/164 (21%), Positives = 71/164 (43%), Gaps = 9/164 (5%)
Query: 9 DTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGT 68
+ +E E R R ++ Q R + ++ + Q L + R+R+E +E Y
Sbjct: 908 EEEEELQREEREKRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQE-----RERQYRK 962
Query: 69 SQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGLPTYLS 128
+ Q+L +E R RQ +K ++RE+ ++L+ E L + + +
Sbjct: 963 DKKLQQKEEQLLGEEPEKRRRQEREK--KYREE-EELQQEEEQLLREEREKRRRQEWERQ 1019
Query: 129 YSNTYPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQ 172
Y + E+ ++ RL+ ++ Q+R E QQ+E+Q
Sbjct: 1020 YRKKDELQQEEEQLLREEREK-RRLQERERQYREEEELQQEEEQ 1062
Score = 32.3 bits (72), Expect = 0.25
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 30/167 (17%)
Query: 22 REKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQVQYDVVVQMLE 81
+E+E Q R+R + Q L Q DRK RE RS+E + ++ Q L
Sbjct: 1471 QEREEQQLHRQERDRKFLEEEQQLRRQERDRKFREQELRSQE-----PERKFLEEEQQLH 1525
Query: 82 KEEADRTRQLAKKVQEFREQK--QQLKNGREFSLWDPGQVWKGLPTYLSYSNTYPGPASL 139
+++ R R+ ++ Q+ R Q+ QQ + R+ + Q+ +
Sbjct: 1526 RQQ--RQRKFLQEEQQLRRQERGQQRRQDRDRKFREEEQLRQ--------------EREE 1569
Query: 140 QYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQQAKVDENYTGKQPG 186
Q S ++ DR RL Q+ R+Q+++++ DE +Q G
Sbjct: 1570 QQLSRQERDRKFRLEEQK-------VRRQEQERKFMEDEQQLRRQEG 1609
Score = 31.2 bits (69), Expect = 0.57
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 17 EARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQVQYDVV 76
E ++ + +ERQ+R F + + + ++ + E +R +E Q++
Sbjct: 224 EEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLR---- 279
Query: 77 VQMLEKEEADRTRQLAKKVQEFREQKQQLKNGRE 110
LE++E R RQ ++ Q+ ++QQL+ +E
Sbjct: 280 --KLERQELRRERQEEEQQQQRLRREQQLRRKQE 311
Score = 31.2 bits (69), Expect = 0.57
Identities = 36/165 (21%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 17 EARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQVQYDVV 76
E RR +E ERQ R + + + + L + +++RR+ ER Q +
Sbjct: 1069 ETRRRQELERQYR----KEEELQQEEEQLLREEPEKRRRQERERQCREEEELQQEEE--- 1121
Query: 77 VQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGLPTYLSYSNTYPGP 136
Q+L +E R RQ ++ ++RE+++ + + +P + + Y
Sbjct: 1122 -QLLREEREKRRRQELER--QYREEEEVQQEEEQLLREEPEKRRRQ-----ELERQYREE 1173
Query: 137 ASLQYFSGEDL--DRDTRLRMQQGQFRYNLERQQQEQQQAKVDEN 179
LQ + L +++ R + ++ Q+R E Q+Q+++Q DE+
Sbjct: 1174 EELQQEEEQLLREEQEKRRQERERQYREEEELQRQKRKQRYRDED 1218
Score = 30.8 bits (68), Expect = 0.74
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 19 RRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQVQYDVVVQ 78
++ R++E++ R + R+R + Q + + KRR+ + ++
Sbjct: 1274 QQERDREQERRRWQQRDRHFPEEEQLEREEQKEAKRRDRKSQEEK--------------- 1318
Query: 79 MLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGLPTYLSYSNTYPGPAS 138
L +EE + R+ + ++FRE++Q L+ E L + K L +
Sbjct: 1319 QLLREEREEKRRRQETDRKFREEEQLLQEREEQPLRRQERDRKFREEELRH--------- 1369
Query: 139 LQYFSGEDLDRDTRLRMQQGQFRYNLERQ----QQEQQQAKVDEN 179
Q + L+ + RLR Q+ + ++ E Q Q+ +QQ + D +
Sbjct: 1370 -QEQGRKFLEEEQRLRRQERERKFLKEEQQLRCQEREQQLRQDRD 1413
Score = 30.4 bits (67), Expect = 0.97
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 7/157 (4%)
Query: 17 EARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQVQYDVV 76
E ++ R +ER+ + R+R + Q L+ Q DRK RE ++ + ++ +
Sbjct: 1395 EEQQLRCQEREQQLRQDRDRKFREEEQQLSRQERDRKFREEEQQVRRQERERKFLEEE-- 1452
Query: 77 VQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGLPTYLSYSNTYPGP 136
Q L +E + R+ + +QE RE++Q + R+ + Q + +
Sbjct: 1453 -QQLRQERHRKFREEEQLLQE-REEQQLHRQERDRKFLEEEQQLRRQERDRKFREQ---E 1507
Query: 137 ASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQQ 173
Q + L+ + +L QQ Q ++ E QQ +Q+
Sbjct: 1508 LRSQEPERKFLEEEQQLHRQQRQRKFLQEEQQLRRQE 1544
Score = 30.0 bits (66), Expect = 1.3
Identities = 37/160 (23%), Positives = 70/160 (43%), Gaps = 13/160 (8%)
Query: 17 EARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAER--SKEAAYGTSQVQYD 74
E +R R +ER+ +F ++ + + Q DRK RE ++ +E + +
Sbjct: 1379 EEQRLRRQERERKFLKEEQQLRCQEREQQLRQDRDRKFREEEQQLSRQERDRKFREEEQQ 1438
Query: 75 VVVQMLEKEEADRTRQL-AKKVQEFREQKQQLKNGREFSLWDPGQVWKGLPTYLSYSNTY 133
V Q E++ + +QL ++ ++FRE++Q L+ E L + K L
Sbjct: 1439 VRRQERERKFLEEEQQLRQERHRKFREEEQLLQEREEQQLHRQERDRKFLEE-------- 1490
Query: 134 PGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQQ 173
L+ + R+ LR Q+ + ++ E QQ +QQ
Sbjct: 1491 --EQQLRRQERDRKFREQELRSQEPERKFLEEEQQLHRQQ 1528
Score = 29.6 bits (65), Expect = 1.6
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 24/161 (14%)
Query: 17 EARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQVQYDVV 76
+ RR +E+ER+ + R + + Q + + RRE ER ++ + +
Sbjct: 305 QLRRKQEEERREQQEERREQQERREQQEERRE--QQLRREQEERREQQLRREQEEERREQ 362
Query: 77 VQMLEKEEADRTRQLAKKVQEFREQ----KQQLKNGREFSLWDPGQVWKGLPTYLSYSNT 132
E+EE R +QL ++ Q REQ +QQL+ RE L Q+ +
Sbjct: 363 QLRREQEEERREQQLRREQQLRREQQLRREQQLR--REQQLRREQQLRR----------- 409
Query: 133 YPGPASLQYFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQQ 173
Q + L R+ +LR +Q + R+ + +Q+ ++Q
Sbjct: 410 -----EQQLRREQQLRREQQLRREQEEERHEQKHEQERREQ 445
Score = 29.6 bits (65), Expect = 1.6
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 28/143 (19%)
Query: 51 DRKRREAAERSKEAAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGRE 110
+++RR+ ER KE +Q LE+EE + R+ A+++QE + Q+ + R
Sbjct: 818 EQRRRQRREREKE-------------LQFLEEEEQLQRRERAQQLQEEEDGLQEDQERRR 864
Query: 111 FSLWDPGQVWKGL---PTYLSYSNTYPGPA---------SLQYFSGEDLDRDTR--LRMQ 156
Q W+ Y PA L E+L R+ R R Q
Sbjct: 865 SQEQRRDQKWRWQLEEERKRRRHTLYAKPALQEQLRKEQQLLQEEEEELQREEREKRRRQ 924
Query: 157 QGQFRYNLERQ-QQEQQQAKVDE 178
+ + +Y E Q QQE++Q +E
Sbjct: 925 EQERQYREEEQLQQEEEQLLREE 947
Score = 28.9 bits (63), Expect = 2.8
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 11/94 (11%)
Query: 17 EARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQVQYDVV 76
E ++ R +ER +F + Q L +Q DRK RE Q++ +
Sbjct: 1760 EEQQLRRQERDRKFREEEQLRQEREEQQLRSQESDRKFRE-----------EEQLRQERE 1808
Query: 77 VQMLEKEEADRTRQLAKKVQEFREQKQQLKNGRE 110
Q L ++ D + ++ + EQ+Q+L+ R+
Sbjct: 1809 EQQLRPQQRDGKYRWEEEQLQLEEQEQRLRQERD 1842
Score = 28.1 bits (61), Expect = 4.8
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 17 EARRNREKERQNRFFNV----RNRVMGVDVQALNNQVGDR-----KRREAAERSKEAAYG 67
+ +R++E+ER+ R+ + R Q L + +R KR+E ER ++
Sbjct: 475 QLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQRLKRQEEEERLQQRLRS 534
Query: 68 TSQV---QYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQ 104
Q+ Q + Q+L++EE R Q ++ + REQ+++
Sbjct: 535 EQQLRREQEERREQLLKREEEKRLEQERREQRLKREQEER 574
>gi|7661936 scaffold attachment factor B2 [Homo sapiens]
Length = 953
Score = 32.7 bits (73), Expect = 0.19
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 5 KQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAA--ERSK 62
K+ D I+ +R RE++RQ R R + + + +R++R A ER +
Sbjct: 606 KEKRDILSFDKIKEQRERERQRQ------REREIRETERRREREQREREQRLEAFHERKE 659
Query: 63 EAAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQ 104
+A ++Q + Q LE+E +R R ++++ RE++++
Sbjct: 660 KARLQRERLQLECQRQRLERERMERERLERERMRVERERRKE 701
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 32.0 bits (71), Expect = 0.33
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 5 KQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEA 64
K+ +E+ + RR REK ++ R R R G + G+RK+ E + +
Sbjct: 49 KEGKKERESERKKERREREKRKRERE-KERKRERGK-----KEKKGERKKEERERKKRRR 102
Query: 65 AYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGRE 110
+ + + EK+E RT + K+ + E+K++ + RE
Sbjct: 103 EKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERE 148
Score = 30.8 bits (68), Expect = 0.74
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 18/109 (16%)
Query: 5 KQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRRE--AAERSK 62
++ + KE + R +E+ER+ R R +V + + + +RK+RE ER K
Sbjct: 139 RKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKK 198
Query: 63 EAAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFRE-QKQQLKNGRE 110
E KE +R ++ KK + +E QK + N RE
Sbjct: 199 ERE---------------RKERRERKKERKKKEERKKERQKDRQTNWRE 232
Score = 28.9 bits (63), Expect = 2.8
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 5 KQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEA 64
++ + K+ E R +EKER+ R RNR + +R+R+E ER KE
Sbjct: 163 RKKRERKQVGEKEEER-KEKERKERKKRERNR---------KERKKERERKERRERKKER 212
Query: 65 AYGTSQV---QYDVVVQMLEKEEADRTRQLAKK 94
+ Q D EKE R R+ KK
Sbjct: 213 KKKEERKKERQKDRQTNWREKERGKRERKERKK 245
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 32.0 bits (71), Expect = 0.33
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 16/107 (14%)
Query: 5 KQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEA 64
K+ TD + + R+RE++R+ RNR G + + DR+R +R +E
Sbjct: 89 KRQTDRER----DKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQRQRERER 144
Query: 65 AYGTSQVQYDVVVQMLEKEEADRTRQ-LAKKVQEFREQKQQLKNGRE 110
Q K E DR RQ A++ + +E+K++ K R+
Sbjct: 145 QR-----------QRERKRETDRERQRWAEREERKKERKKERKKERK 180
Score = 28.9 bits (63), Expect = 2.8
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 13/94 (13%)
Query: 17 EARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQVQYDVV 76
E R R+KER + R + Q + +RKR+ ER K+
Sbjct: 53 EKERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDR------------ 100
Query: 77 VQMLEKEEADRTRQLAKKVQEFREQKQQLKNGRE 110
K E DR R+ +K R+++ + + RE
Sbjct: 101 -DRERKRETDRNRERNRKGGRERDKQTERERDRE 133
Score = 27.7 bits (60), Expect = 6.3
Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 10/116 (8%)
Query: 5 KQSTDTKEAAAIEARRNREKERQN---RFFNVRNRVMGVDVQALNNQVGDRKRREAAERS 61
++ +T E R+R++ER+N R R R + ++ +R+R++ +R
Sbjct: 6 ERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQ 65
Query: 62 KEAAYGTSQVQYDVVVQMLEKE-------EADRTRQLAKKVQEFREQKQQLKNGRE 110
++ T + + ++E E D+ R +K + R +++ K GRE
Sbjct: 66 RQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRE 121
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 32.0 bits (71), Expect = 0.33
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 8/92 (8%)
Query: 19 RRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQVQYDVVVQ 78
RR+R++ER+ N R R D +++R + ERSKE Q V +
Sbjct: 349 RRDRDREREKE--NERGRRRDRDYDKERGNEREKERERSRERSKE------QRSRGEVEE 400
Query: 79 MLEKEEADRTRQLAKKVQEFREQKQQLKNGRE 110
KE+ D R K +E+K RE
Sbjct: 401 KKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRE 432
Score = 28.1 bits (61), Expect = 4.8
Identities = 20/96 (20%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 9 DTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGT 68
D+K+ R+RE++ ++R R+R G ++ + + + + E+ E+S + +
Sbjct: 418 DSKKEKKHSRSRSRERKHRSRS---RSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSG 474
Query: 69 SQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQ 104
SQ + D V+ +K E +++ ++K +E+ +
Sbjct: 475 SQGRTD-SVEKSKKREHSPSKEKSRKRSRSKERSHK 509
>gi|109452611 chromosome 14 open reading frame 140 isoform a [Homo
sapiens]
Length = 456
Score = 32.0 bits (71), Expect = 0.33
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 14/195 (7%)
Query: 5 KQSTDTKEAAA-----IEARRNREKERQNRFFNVRNR----VMGVDVQALNNQ--VGDRK 53
++S T EA + R +E +R F VRN+ V+G + A + V +
Sbjct: 147 RKSCSTGEAGTDGDHNVYPRPPEPREFSSRNFGVRNQGNFSVVGTVLAATQAEKAVANFD 206
Query: 54 RREAAERSKEAAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSL 113
R E + + A G S + Q+L + + +T + +++Q +EQ ++ +NG +
Sbjct: 207 RTEWVQIRRLEAAGESLEEEIRRKQILLRGKLKKTEEELRRIQTQKEQAKENENGELQKI 266
Query: 114 WDPGQVWKGLPTYLSYSNTY-PGPASLQYFSGEDLDRDTRLRMQQ--GQFRYNLERQQQE 170
P KG + Y + P + FS + + +T R QQ G F+++ R Q+
Sbjct: 267 ILPRSRVKGNKSNTMYKPIFSPEFEFEEEFSRDRREDETWGRSQQNSGPFQFSDYRIQRL 326
Query: 171 QQQAKVDENYTGKQP 185
+++ V N + P
Sbjct: 327 KRERLVASNNKIRDP 341
>gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens]
Length = 1219
Score = 32.0 bits (71), Expect = 0.33
Identities = 21/98 (21%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 6 QSTDTKEAAAIEARRNREKERQNRFFNVRNRV--MGVDVQALNNQVGDRKRREAAERSKE 63
Q T + + ++ + K+ + + ++ + + V+ ++L + +RK++ A ERS+
Sbjct: 698 QETSEQAQSKFKSEKQNRKQLELKVTSLEEELTDLRVEKESLEKNLSERKKKSAQERSQ- 756
Query: 64 AAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQ 101
++ + D + + + EE D+ RQL KK + +Q
Sbjct: 757 -----AEEEIDEIRKSYQ-EELDKLRQLLKKTRVSTDQ 788
>gi|41281453 serine/threonine kinase 2 [Homo sapiens]
Length = 1235
Score = 31.6 bits (70), Expect = 0.43
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Query: 12 EAAAIEARRNREKER-QNRFFNVRNRVMGVDVQA---LNNQVGDRKRREAAERSKEAAYG 67
EA I+ + +E + QN N + V+ +A L ++ R++ E A+
Sbjct: 903 EAKRIKGEQEKELSKFQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQE 962
Query: 68 TSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWD 115
Q Q + L+K + +LA +E KQQL RE ++W+
Sbjct: 963 FVQKQQQELDGSLKKIIQQQKAELANIERECLNNKQQLMRAREAAIWE 1010
Score = 27.3 bits (59), Expect = 8.2
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 43 QALNNQVGDRKRREAAERSKEAAYGTSQVQYDVVVQMLEKEEADRTRQLAKK-VQEFREQ 101
Q LN+++ +++RE R E + + QYD ++ LEK++ +L ++ R++
Sbjct: 846 QQLNSKL--QQQREQIFRRFEQEMMSKKRQYDQEIENLEKQQKQTIERLEQEHTNRLRDE 903
Query: 102 KQQLKNGREFSL 113
+++K +E L
Sbjct: 904 AKRIKGEQEKEL 915
>gi|4505101 microtubule-associated protein 7 [Homo sapiens]
Length = 749
Score = 31.6 bits (70), Expect = 0.43
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 7 STDTKEAAAIEARRNR----EKERQNRFFNVRNRVMGVDVQALNNQVGDRK--RREAAER 60
+TD +EA + A + R ++E++ R + + + L +V + + RRE R
Sbjct: 473 TTDPEEATRLLAEKRRLAREQREKEERERREQEELERQKREELAQRVAEERTTRREEESR 532
Query: 61 SKEAAYGTS---QVQYDVVVQML-EKEEADRTRQLAKKVQEFREQKQQLKNGRE 110
EA Q+Q + L E+EEA+R ++ ++ RE+ ++++ RE
Sbjct: 533 RLEAEQAREKEEQLQRQAEERALREREEAERAQRQKEEEARVREEAERVRQERE 586
Score = 28.9 bits (63), Expect = 2.8
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 25/93 (26%)
Query: 11 KEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQ 70
+E+ +EA + REKE Q + QA + +R+ E A+R KE
Sbjct: 529 EESRRLEAEQAREKEEQ------------LQRQAEERALREREEAERAQRQKEE------ 570
Query: 71 VQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQ 103
+ +EEA+R RQ +K + EQ++
Sbjct: 571 -------EARVREEAERVRQEREKHFQREEQER 596
>gi|225579095 S-phase cyclin A-associated protein in the ER isoform
b [Homo sapiens]
Length = 1154
Score = 31.2 bits (69), Expect = 0.57
Identities = 38/199 (19%), Positives = 81/199 (40%), Gaps = 48/199 (24%)
Query: 4 IKQSTDTKEAAAIEARRNREKERQNRFFNVRNRV-MGVDVQALNNQVGDRKRREAAERSK 62
I +S E ++A++ REK R+ + ++ + DV+ ++ D++RR E+
Sbjct: 294 IAESKKKHEEKQMKAQQLREKLREEKTLKLQKLLEREKDVRKWKEELLDQRRRMMEEKLL 353
Query: 63 EAAYGTSQVQYDVVVQMLEKEEAD------------------------RTRQLAKKVQEF 98
A + +VQ +V+ ++EEA Q ++QE
Sbjct: 354 HAEF-KREVQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRHDVLSKLKEYEQRLNELQEE 412
Query: 99 REQKQQLKNGREFSLWDPGQVWKGLPTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQG 158
R+++Q+ K R+ ++ + + E R L M++
Sbjct: 413 RQRRQEEKQARDEAVQERKRA----------------------LEAERQARVEELLMKRK 450
Query: 159 QFRYNLERQQQEQQQAKVD 177
+ +E+Q+QE+++A+ D
Sbjct: 451 EQEARIEQQRQEKEKARED 469
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.127 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,500,718
Number of Sequences: 37866
Number of extensions: 325339
Number of successful extensions: 2302
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 1760
Number of HSP's gapped (non-prelim): 497
length of query: 192
length of database: 18,247,518
effective HSP length: 97
effective length of query: 95
effective length of database: 14,574,516
effective search space: 1384579020
effective search space used: 1384579020
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.