RIBC1 13198

Name: RIBC1	Sequence: fasta or formatted (192aa)		NCBI GI: 21450659
Description: RIB43A domain with coiled-coils 1 isoform 2		Referenced in: Coiled-Coil Proteins
Other entries for this name: alt prot [379aa] RIB43A domain with coiled-coils 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 13 3 C cysteine 0.0 0 0 D aspartate 5.7 11 1 E glutamate 9.4 18 2 F phenylalanine 3.1 6 2 G glycine 5.7 11 1 H histidine 0.0 0 0 I isoleucine 1.0 2 1 K lysine 6.8 13 2 L leucine 5.7 11 1 M methionine 2.1 4 1 N asparagine 5.7 11 2 P proline 3.6 7 2 Q glutamine 12.5 24 3 R arginine 10.4 20 2 S serine 4.7 9 1 T threonine 4.7 9 1 V valine 6.2 12 3 W tryptophan 1.0 2 1 Y tyrosine 4.7 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RIB43A domain with coiled-coils 1 isoform 2 RIBC1 0.931 RIB43A domain with coiled-coils 1 isoform 1 RIBC2 0.190 RIB43A domain with coiled-coils 2 INCENP 0.033 inner centromere protein antigens 135/155kDa isofor... INCENP 0.033 inner centromere protein antigens 135/155kDa isofor... RBM25 0.028 RNA binding motif protein 25 HIP1R 0.028 huntingtin interacting protein-1-related LOC100294412 0.028 PREDICTED: similar to KIAA0655 protein SFRS17A 0.028 DNA segment on chromosome X and Y (unique) 155 expre... LOC100134067 0.025 PREDICTED: hypothetical protein LOC100286959 0.025 PREDICTED: hypothetical protein XP_002343921 GIGYF2 0.022 GRB10 interacting GYF protein 2 isoform c GIGYF2 0.022 GRB10 interacting GYF protein 2 isoform a GIGYF2 0.022 GRB10 interacting GYF protein 2 isoform b GIGYF2 0.022 GRB10 interacting GYF protein 2 isoform b LOC100133758 0.022 PREDICTED: hypothetical protein, partial STK10 0.022 serine/threonine kinase 10 CHD7 0.022 chromodomain helicase DNA binding protein 7 TNNT2 0.022 troponin T type 2, cardiac isoform 3 TNNT2 0.022 troponin T type 2, cardiac isoform 1 TCHH 0.022 trichohyalin SAFB2 0.022 scaffold attachment factor B2 LOC100133599 0.019 PREDICTED: hypothetical protein LOC100131202 0.019 PREDICTED: hypothetical protein PRPF38B 0.019 PRP38 pre-mRNA processing factor 38 (yeast) domain ... FAM164C 0.019 chromosome 14 open reading frame 140 isoform a [Hom... FKBP15 0.019 FK506 binding protein 15, 133kDa SLK 0.019 serine/threonine kinase 2 MAP7 0.019 microtubule-associated protein 7 SCAPER 0.017 S-phase cyclin A-associated protein in the ER isofo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.