C11orf60 13043

Name: C11orf60	Sequence: fasta or formatted (355aa)		NCBI GI: 21361820
Description: IFT46		Referenced in: Additional Structural Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 20 1 C cysteine 0.8 3 1 D aspartate 10.4 37 8 E glutamate 9.3 33 3 F phenylalanine 3.1 11 1 G glycine 3.7 13 1 H histidine 3.7 13 1 I isoleucine 4.8 17 1 K lysine 7.0 25 2 L leucine 9.0 32 2 M methionine 2.3 8 1 N asparagine 2.5 9 1 P proline 8.2 29 2 Q glutamine 3.9 14 1 R arginine 3.1 11 1 S serine 9.9 35 2 T threonine 5.1 18 1 V valine 3.7 13 1 W tryptophan 1.1 4 1 Y tyrosine 2.8 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 IFT46 MTERFD2 0.034 MTERF domain containing 2 SETD1B 0.028 SET domain containing 1B ATAD2 0.027 ATPase family, AAA domain containing 2 CASZ1 0.026 castor homolog 1, zinc finger isoform a NPM1 0.024 nucleophosmin 1 isoform 3 NPM1 0.024 nucleophosmin 1 isoform 2 NPM1 0.024 nucleophosmin 1 isoform 1 BAZ2B 0.023 bromodomain adjacent to zinc finger domain, 2B [Homo... LOC100291923 0.023 PREDICTED: hypothetical protein XP_002344991 LOC100291342 0.023 PREDICTED: hypothetical protein XP_002347636 LOC100287346 0.023 PREDICTED: hypothetical protein XP_002343486 NCL 0.021 nucleolin CASQ2 0.021 cardiac calsequestrin 2 precursor ZBTB7C 0.020 zinc finger and BTB domain containing 7C ZBTB45 0.020 zinc finger and BTB domain containing 45 UBTF 0.020 upstream binding transcription factor, RNA polymera... UBTF 0.020 upstream binding transcription factor, RNA polymera... UBTF 0.020 upstream binding transcription factor, RNA polymerase... BCCIP 0.020 BRCA2 and CDKN1A-interacting protein isoform C [Homo... BCCIP 0.020 BRCA2 and CDKN1A-interacting protein isoform BCCIPbe... BCCIP 0.020 BRCA2 and CDKN1A-interacting protein isoform BCCIPalp... LCP2 0.018 lymphocyte cytosolic protein 2 CENPB 0.018 centromere protein B C11orf51 0.018 hypothetical protein LOC25906 C19orf2 0.018 RPB5-mediating protein isoform b C19orf2 0.018 RPB5-mediating protein isoform a LAS1L 0.018 LAS1-like RBM28 0.017 RNA binding motif protein 28 LOC645490 0.017 PREDICTED: similar to hCG1991922 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.