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Search of human proteins with 21361716
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21361716 Golgi phosphoprotein 3-like [Homo sapiens]
(285 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21361716 Golgi phosphoprotein 3-like [Homo sapiens] 566 e-162
gi|11545859 golgi phosphoprotein 3 [Homo sapiens] 388 e-108
gi|9256602 protocadherin beta 10 precursor [Homo sapiens] 32 0.64
gi|14195616 protocadherin beta 9 precursor [Homo sapiens] 32 0.64
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens] 31 1.1
gi|21281677 WD repeat domain 36 [Homo sapiens] 31 1.4
gi|19115954 dynein, axonemal, heavy chain 5 [Homo sapiens] 31 1.4
gi|105990541 ATP-binding cassette, sub-family A member 4 [Homo s... 31 1.4
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens] 30 1.9
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens] 30 1.9
gi|9256604 protocadherin beta 11 precursor [Homo sapiens] 30 1.9
gi|8922911 radical S-adenosyl methionine domain containing 1 [Ho... 30 1.9
gi|9256612 protocadherin beta 2 precursor [Homo sapiens] 30 1.9
gi|122939208 nuclear antigen Sp100 isoform 1 [Homo sapiens] 30 3.2
gi|71051596 coiled-coil domain containing 7 [Homo sapiens] 30 3.2
gi|37059792 coiled-coil domain containing 7 [Homo sapiens] 30 3.2
gi|151301228 formin binding protein 3 [Homo sapiens] 30 3.2
gi|24415404 MDN1, midasin homolog [Homo sapiens] 29 5.4
gi|56806673 high-mobility group box 1-like 1 [Homo sapiens] 28 7.0
gi|122937227 U2-associated SR140 protein [Homo sapiens] 28 7.0
gi|16262452 cingulin [Homo sapiens] 28 9.2
gi|4758666 LATS homolog 1 [Homo sapiens] 28 9.2
gi|9256606 protocadherin beta 12 precursor [Homo sapiens] 28 9.2
gi|38348244 hypothetical protein LOC200844 [Homo sapiens] 28 9.2
>gi|21361716 Golgi phosphoprotein 3-like [Homo sapiens]
Length = 285
Score = 566 bits (1459), Expect = e-162
Identities = 285/285 (100%), Positives = 285/285 (100%)
Query: 1 MTTLTHRARRTEISKNSEKKMESEEDSNWEKSPDNEDSGDSKDIRLTLMEEVLLLGLKDK 60
MTTLTHRARRTEISKNSEKKMESEEDSNWEKSPDNEDSGDSKDIRLTLMEEVLLLGLKDK
Sbjct: 1 MTTLTHRARRTEISKNSEKKMESEEDSNWEKSPDNEDSGDSKDIRLTLMEEVLLLGLKDK 60
Query: 61 EGYTSFWNDCISSGLRGGILIELAMRGRIYLEPPTMRKKRLLDRKVLLKSDSPTGDVLLD 120
EGYTSFWNDCISSGLRGGILIELAMRGRIYLEPPTMRKKRLLDRKVLLKSDSPTGDVLLD
Sbjct: 61 EGYTSFWNDCISSGLRGGILIELAMRGRIYLEPPTMRKKRLLDRKVLLKSDSPTGDVLLD 120
Query: 121 ETLKHIKATEPTETVQTWIELLTGETWNPFKLQYQLRNVRERIAKNLVEKGILTTEKQNF 180
ETLKHIKATEPTETVQTWIELLTGETWNPFKLQYQLRNVRERIAKNLVEKGILTTEKQNF
Sbjct: 121 ETLKHIKATEPTETVQTWIELLTGETWNPFKLQYQLRNVRERIAKNLVEKGILTTEKQNF 180
Query: 181 LLFDMTTHPVTNTTEKQRLVKKLQDSVLERWVNDPQRMDKRTLALLVLAHSSDVLENVFS 240
LLFDMTTHPVTNTTEKQRLVKKLQDSVLERWVNDPQRMDKRTLALLVLAHSSDVLENVFS
Sbjct: 181 LLFDMTTHPVTNTTEKQRLVKKLQDSVLERWVNDPQRMDKRTLALLVLAHSSDVLENVFS 240
Query: 241 SLTDDKYDVAMNRAKDLVELDPEVEGTKPSATEMIWAVLAAFNKS 285
SLTDDKYDVAMNRAKDLVELDPEVEGTKPSATEMIWAVLAAFNKS
Sbjct: 241 SLTDDKYDVAMNRAKDLVELDPEVEGTKPSATEMIWAVLAAFNKS 285
>gi|11545859 golgi phosphoprotein 3 [Homo sapiens]
Length = 298
Score = 388 bits (997), Expect = e-108
Identities = 195/298 (65%), Positives = 238/298 (79%), Gaps = 14/298 (4%)
Query: 1 MTTLTHRA-----RRTEISKNSEKKME--------SEEDSNWEKSP-DNEDSGDSKDIRL 46
MT+LT R+ RRTE S+N+ K SE+D+ + D++D GDSK+ RL
Sbjct: 1 MTSLTQRSSGLVQRRTEASRNAADKERAAGGGAGSSEDDAQSRRDEQDDDDKGDSKETRL 60
Query: 47 TLMEEVLLLGLKDKEGYTSFWNDCISSGLRGGILIELAMRGRIYLEPPTMRKKRLLDRKV 106
TLMEEVLLLGLKD+EGYTSFWNDCISSGLRG +LIELA+RGR+ LE MR+K LL RKV
Sbjct: 61 TLMEEVLLLGLKDREGYTSFWNDCISSGLRGCMLIELALRGRLQLEACGMRRKSLLTRKV 120
Query: 107 LLKSDSPTGDVLLDETLKHIKATEPTETVQTWIELLTGETWNPFKLQYQLRNVRERIAKN 166
+ KSD+PTGDVLLDE LKH+K T+P ETVQ WIELL+GETWNP KL YQLRNVRER+AKN
Sbjct: 121 ICKSDAPTGDVLLDEALKHVKETQPPETVQNWIELLSGETWNPLKLHYQLRNVRERLAKN 180
Query: 167 LVEKGILTTEKQNFLLFDMTTHPVTNTTEKQRLVKKLQDSVLERWVNDPQRMDKRTLALL 226
LVEKG+LTTEKQNFLLFDMTTHP+TN KQRL+KK+Q++VL++WVNDP RMD+R LAL+
Sbjct: 181 LVEKGVLTTEKQNFLLFDMTTHPLTNNNIKQRLIKKVQEAVLDKWVNDPHRMDRRLLALI 240
Query: 227 VLAHSSDVLENVFSSLTDDKYDVAMNRAKDLVELDPEVEGTKPSATEMIWAVLAAFNK 284
LAH+SDVLEN F+ L D++YD+A R + L++LDPEVE K + E++WAV+AAF K
Sbjct: 241 YLAHASDVLENAFAPLLDEQYDLATKRVRQLLDLDPEVECLKANTNEVLWAVVAAFTK 298
>gi|9256602 protocadherin beta 10 precursor [Homo sapiens]
Length = 800
Score = 32.0 bits (71), Expect = 0.64
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 103 DRKVLLKSDSPTGDVLLDETLKHIKATEPTETVQTWIELLTGETWNPFKLQYQLRNVRE 161
D K L DS TG++L +E L K P E + ++L + + ++ + ++R++ +
Sbjct: 70 DNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDIND 128
>gi|14195616 protocadherin beta 9 precursor [Homo sapiens]
Length = 797
Score = 32.0 bits (71), Expect = 0.64
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 103 DRKVLLKSDSPTGDVLLDETLKHIKATEPTETVQTWIELLTGETWNPFKLQYQLRNVRE 161
D K L DS TG++L +E L K P E + ++L + + ++ + ++R++ +
Sbjct: 70 DNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAELRVRDIND 128
>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
Length = 879
Score = 31.2 bits (69), Expect = 1.1
Identities = 32/134 (23%), Positives = 49/134 (36%), Gaps = 33/134 (24%)
Query: 10 RTEISKNSEKKMESEEDSNWEKSPDNEDSGDSKDIRLTLMEEVLLLGLKDKEGYTSFWND 69
+ + + KK ED W + E GD G + W
Sbjct: 618 KERFKQGTSKKCIQSEDKKWFTPREFEIEGD--------------------RGASKNWKL 657
Query: 70 CISSGLRGGILIELAMRGRIYLEPPTMRKKRLLD--RKVLL------KSDSPTGDVLLDE 121
I G G +++ M + EPP+ RKKR+L+ L+ K +P V E
Sbjct: 658 SIRCG---GYTLKVLMENKFLPEPPSTRKKRILESHNNTLVDPCEEHKKKNPDASVKFSE 714
Query: 122 TLKHIKATEPTETV 135
LK K +E +T+
Sbjct: 715 FLK--KCSETWKTI 726
>gi|21281677 WD repeat domain 36 [Homo sapiens]
Length = 951
Score = 30.8 bits (68), Expect = 1.4
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 213 NDPQRMDKRTLALLVLAHSSDVLENVFSSLTDDKYDVAMNRAKD 256
NDPQ+ + + L VLA SD + L ++KYD A+N K+
Sbjct: 808 NDPQQ--SKVVNLGVLAQKSDFCLKLEEGLVNNKYDTALNLLKE 849
>gi|19115954 dynein, axonemal, heavy chain 5 [Homo sapiens]
Length = 4624
Score = 30.8 bits (68), Expect = 1.4
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 172 ILTTEKQNFLLFDMTTHPVTNTTEKQRLVKKLQDSVLERWVNDPQRMDKRTLALLVLAHS 231
++ TEKQ L TH + + T +R +K+L+D++L R + + + ++VL+++
Sbjct: 3731 VILTEKQE--LEKERTHLMEDVTANKRRMKELEDNLLYRLTSTQGSLVEDESLIVVLSNT 3788
Query: 232 SDVLENVFSSL-TDDKYDVAMNRAKD 256
E V L + +V +N A++
Sbjct: 3789 KRTAEEVTQKLEISAETEVQINSARE 3814
>gi|105990541 ATP-binding cassette, sub-family A member 4 [Homo
sapiens]
Length = 2273
Score = 30.8 bits (68), Expect = 1.4
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 47/193 (24%)
Query: 64 TSFWNDCISSGLRGGILIELAMRGRIYLEPPTMRKKRLLDRKVLLKSDSPTGDVLLD--- 120
TSF N I S L L ++A R K LL K+L DSP +L
Sbjct: 367 TSFCNALIQS-LESNPLTKIAWRAA----------KPLLMGKILYTPDSPAARRILKNAN 415
Query: 121 ---ETLKHIKATEPTETVQTWIELLTGETWNPFKLQYQLRNVRERIA---------KNLV 168
E L+H++ + V+ W E + + W F Q+ +R+ + + L
Sbjct: 416 STFEELEHVR-----KLVKAW-EEVGPQIWYFFDNSTQMNMIRDTLGNPTVKDFLNRQLG 469
Query: 169 EKGILTTEKQNFL-----------LFDMTTHPVTNTTEKQ-RLVKK-LQDSVLERW--VN 213
E+GI NFL + + + N T++ RLV + L+ VL+++ N
Sbjct: 470 EEGITAEAILNFLYKGPRESQADDMANFDWRDIFNITDRTLRLVNQYLECLVLDKFESYN 529
Query: 214 DPQRMDKRTLALL 226
D ++ +R L+LL
Sbjct: 530 DETQLTQRALSLL 542
>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 488
Score = 30.4 bits (67), Expect = 1.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 7 RARRTEISKNSEKKMESEEDSNWEKSPDNEDSGDSKD 43
+A +++ K E+ E EED EK ++ED D +D
Sbjct: 313 KAAKSKKKKEEEENEEDEEDEEEEKDEEDEDEEDDED 349
>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 487
Score = 30.4 bits (67), Expect = 1.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 7 RARRTEISKNSEKKMESEEDSNWEKSPDNEDSGDSKD 43
+A +++ K E+ E EED EK ++ED D +D
Sbjct: 313 KAAKSKKKKEEEENEEDEEDEEEEKDEEDEDEEDDED 349
>gi|9256604 protocadherin beta 11 precursor [Homo sapiens]
Length = 797
Score = 30.4 bits (67), Expect = 1.9
Identities = 26/112 (23%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 53 LLLGLKDKEGYTSFWNDCISSGLRGGILI-ELAMRGRIYLEPPTMRKKRLL--DRKVLLK 109
+LLG+ T W+ ++ ++ G + LA + + + R R++ D+K L+
Sbjct: 19 VLLGMSQAGSET--WSFSVAEEMQSGSFVGNLAKDLGLKVRELSSRGARVVSNDKKQRLQ 76
Query: 110 SDSPTGDVLLDETLKHIKATEPTETVQTWIELLTGETWNPFKLQYQLRNVRE 161
D TGD+LL ETL + E +++L +++ Q+R++ +
Sbjct: 77 LDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIELQVRDIND 128
>gi|8922911 radical S-adenosyl methionine domain containing 1 [Homo
sapiens]
Length = 442
Score = 30.4 bits (67), Expect = 1.9
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 18 EKKMESEEDSNWEKSPDNEDSGDSKDI---RLTLMEEVLLLGLKDKEGYT 64
E ++++ E NW K G K + RL L+EEVL LGL+ G T
Sbjct: 318 EARIQTLEPDNWMKEVMLFGHGTRKRVPLGRLELLEEVLALGLRTDVGIT 367
>gi|9256612 protocadherin beta 2 precursor [Homo sapiens]
Length = 798
Score = 30.4 bits (67), Expect = 1.9
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 104 RKVLLKSDSPTGDVLLDETLKHIKATEPTETVQTWIELLTGETWNPFKLQYQLRNVRE 161
+K+ L+ D TGD+LL+E L + PTE ++L F+ + ++R+V +
Sbjct: 73 KKMHLQFDRQTGDLLLNEKLDREELCGPTEPCVLPFQVLLENPLQFFQAELRIRDVND 130
>gi|122939208 nuclear antigen Sp100 isoform 1 [Homo sapiens]
Length = 885
Score = 29.6 bits (65), Expect = 3.2
Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 23/94 (24%)
Query: 10 RTEISKNSEKKMESEEDSNWEKSPDNEDSGDSKDIRLTLMEEVLLLGLKDKEGYTSFWND 69
+ + + KK ED W + E GD G + W
Sbjct: 618 KERFKQGTSKKCIQSEDKKWFTPREFEIEGD--------------------RGASKNWKL 657
Query: 70 CISSGLRGGILIELAMRGRIYLEPPTMRKKRLLD 103
I G G +++ M + EPP+ RKKR+L+
Sbjct: 658 SIRCG---GYTLKVLMENKFLPEPPSTRKKRILE 688
>gi|71051596 coiled-coil domain containing 7 [Homo sapiens]
Length = 486
Score = 29.6 bits (65), Expect = 3.2
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 12/95 (12%)
Query: 170 KGILTTEKQNFLLFDMTTHPVTNTTEKQRLVKKLQDSVLERWVNDPQRMD----KRTLAL 225
K + TE Q T H +TN V + Q ++LER VND +D +
Sbjct: 258 KDVSATEPQ-------TAHSMTNRFNAMLKVFENQANMLERAVNDQVLLDAEYKQMQCDF 310
Query: 226 LVLAHSSDVLENVFSSLTD-DKYDVAMNRAKDLVE 259
+L+ VLEN L D +K NR K V+
Sbjct: 311 QLLSEEKLVLENELQKLKDKEKTKPTNNRTKKAVK 345
>gi|37059792 coiled-coil domain containing 7 [Homo sapiens]
Length = 486
Score = 29.6 bits (65), Expect = 3.2
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 12/95 (12%)
Query: 170 KGILTTEKQNFLLFDMTTHPVTNTTEKQRLVKKLQDSVLERWVNDPQRMD----KRTLAL 225
K + TE Q T H +TN V + Q ++LER VND +D +
Sbjct: 258 KDVSATEPQ-------TAHSMTNRFNAMLKVFENQANMLERAVNDQVLLDAEYKQMQCDF 310
Query: 226 LVLAHSSDVLENVFSSLTD-DKYDVAMNRAKDLVE 259
+L+ VLEN L D +K NR K V+
Sbjct: 311 QLLSEEKLVLENELQKLKDKEKTKPTNNRTKKAVK 345
>gi|151301228 formin binding protein 3 [Homo sapiens]
Length = 930
Score = 29.6 bits (65), Expect = 3.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 9 RRTEISKNSEKKMESEEDSNWEKSPDNEDSGDSKDIRLTLMEEV 52
+R+E S KK ++ NW+ S G+ + R TL+E++
Sbjct: 883 QRSESKHKSPKKKTGKDSGNWDTSGSELSEGELEKRRRTLLEQL 926
>gi|24415404 MDN1, midasin homolog [Homo sapiens]
Length = 5596
Score = 28.9 bits (63), Expect = 5.4
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 12 EISKNSEKKMESEEDSNWEKSPDNEDSGDSKDIRLTLMEEVLLLGLKDKEG 62
E +E++ E+E D N +SP + G S+D + EE + G D++G
Sbjct: 4917 EAGHEAEERGETETDQNESQSPQEPEEGPSEDDKAE-GEEEMDTGADDQDG 4966
>gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
Length = 211
Score = 28.5 bits (62), Expect = 7.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 10 RTEISKNSEKKMESEEDSNWEKSPDNEDSGDSKD 43
+ E SK +++ E EED E+ D ED D D
Sbjct: 177 KAEKSKKKKEEEEDEEDEEDEEEEDEEDEEDDDD 210
>gi|122937227 U2-associated SR140 protein [Homo sapiens]
Length = 1029
Score = 28.5 bits (62), Expect = 7.0
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 6 HRARRTEISKNSEKKMESEEDSNWEKS--------PDNEDSGDSKDIRLTLMEEVLLLGL 57
H E ++N E++ E EED+ KS P E+ +SK + + M E L
Sbjct: 785 HEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTESKFSKYSEMSEEKRAKL 844
Query: 58 KDKEGYTSFWNDCISSGLR 76
++ E + D + SG R
Sbjct: 845 REIELKVMKFQDELESGKR 863
>gi|16262452 cingulin [Homo sapiens]
Length = 1203
Score = 28.1 bits (61), Expect = 9.2
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 25/191 (13%)
Query: 99 KRLLDRKVLLKSDSPTGDVLLDETLKHIKATEPT---------ETVQTWIELLTGETWNP 149
KRLLD+ L+ T + L LKH++ EP ET + E+L G+
Sbjct: 428 KRLLDQGEDLRHGLETQVMELQNKLKHVQGPEPAKEVLLKDLLETRELLEEVLEGKQ--- 484
Query: 150 FKLQYQLRNVRERIAKNLVEKGILTTEKQNFLLFDMTTHPVTNTTEK--QRLVKKLQDSV 207
+++ QLR +RER L KG L K+ D V ++ ++L + +QD+
Sbjct: 485 -RVEEQLR-LRERELTAL--KGAL---KEEVASRDQEVEHVRQQYQRDTEQLRRSMQDAT 537
Query: 208 LERWVNDPQRMDKRTLALLV---LAHSSDVLENVFSSLTDDKYDVAMNRAKDLVELDPEV 264
+ V + +R L + L +S+ + S +K D+ + ++L++L E
Sbjct: 538 QDHAVLEAERQKMSALVRGLQRELEETSEETGHWQSMFQKNKEDLRATK-QELLQLRMEK 596
Query: 265 EGTKPSATEMI 275
E + E I
Sbjct: 597 EEMEEELGEKI 607
>gi|4758666 LATS homolog 1 [Homo sapiens]
Length = 1130
Score = 28.1 bits (61), Expect = 9.2
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 14 SKNSEKKMESEEDSNWEKSPDNEDSGDSKDIRLTLMEEVLLLGLKDKE 61
SK + + E++S EKS +N DSGD + ++T + KD+E
Sbjct: 580 SKEDQPSLPKEDES--EKSYENVDSGDKEKKQITTSPITVRKNKKDEE 625
>gi|9256606 protocadherin beta 12 precursor [Homo sapiens]
Length = 795
Score = 28.1 bits (61), Expect = 9.2
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 103 DRKVLLKSDSPTGDVLLDETLKHIKATEPTETVQTWIELLTGETWNPFKLQYQLRNVRER 162
D K L+ D+ TGD+LL E L + E + ++L +++ Q+R++ +
Sbjct: 70 DNKECLQLDTNTGDLLLREMLDREELCGSNEPCVLYFQVLMKNPTQFLQIELQVRDINDH 129
Query: 163 IAKNLVEKGILTTEKQN 179
+ +EK +L +N
Sbjct: 130 -SPVFLEKEMLLEIPEN 145
>gi|38348244 hypothetical protein LOC200844 [Homo sapiens]
Length = 563
Score = 28.1 bits (61), Expect = 9.2
Identities = 14/70 (20%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 9 RRTEISKNSEKKMESEEDSNWEKSPDNEDSGDSKDIRLTLMEEVLLLGLKDKEGYTSFWN 68
R + S+ SE +++ W+++ + ED+G S + + ++ + + T+ WN
Sbjct: 411 RNYQPSQMSESELQMLASLRWQQNEELEDAGTSHGLSASQVDN-CNVSISTSSDDTTTWN 469
Query: 69 DCISSGLRGG 78
C+ + G
Sbjct: 470 SCLPPPVNQG 479
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,553,643
Number of Sequences: 37866
Number of extensions: 446162
Number of successful extensions: 1602
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1568
Number of HSP's gapped (non-prelim): 41
length of query: 285
length of database: 18,247,518
effective HSP length: 101
effective length of query: 184
effective length of database: 14,423,052
effective search space: 2653841568
effective search space used: 2653841568
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.