Guide to the Human Genome
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Name: OR56B1 Sequence: fasta or formatted (324aa) NCBI GI: 52353340
Description:

olfactory receptor, family 56, subfamily B, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         27           3
 C cysteine            3.1         10           1
 D aspartate           2.2          7           2
 E glutamate           2.8          9           1
 F phenylalanine       4.9         16           2
 G glycine             3.1         10           1
 H histidine           2.8          9           1
 I isoleucine         10.2         33           3
 K lysine              3.4         11           1
 L leucine            16.7         54           2
 M methionine          3.1         10           1
 N asparagine          3.7         12           1
 P proline             4.6         15           2
 Q glutamine           3.1         10           2
 R arginine            2.8          9           2
 S serine              9.3         30           2
 T threonine           4.9         16           2
 V valine              6.5         21           3
 W tryptophan          1.5          5           1
 Y tyrosine            3.1         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 56, subfamily B, member 1... 
OR56B4                0.637   olfactory receptor, family 56, subfamily B, member 4...
OR56A1                0.500   olfactory receptor, family 56, subfamily A, member 1...
OR56A4                0.490   olfactory receptor, family 56, subfamily A, member 4...
OR56A3                0.484   olfactory receptor, family 56, subfamily A, member ...
OR56A5                0.472   olfactory receptor, family 56, subfamily A, member ...
OR56A5                0.472   PREDICTED: olfactory receptor, family 56, subfamily...
OR56A5                0.472   PREDICTED: olfactory receptor, family 56, subfamily ...
OR56A5                0.472   PREDICTED: olfactory receptor, family 56, subfamily...
OR51L1                0.355   olfactory receptor, family 51, subfamily L, member 1...
OR51E1                0.352   olfactory receptor, family 51, subfamily E, member ...
OR52K2                0.347   olfactory receptor, family 52, subfamily K, member 2...
OR52E8                0.342   olfactory receptor, family 52, subfamily E, member 8...
OR51F2                0.340   olfactory receptor, family 51, subfamily F, member 2...
OR51G2                0.339   olfactory receptor, family 51, subfamily G, member 2...
OR52K1                0.339   olfactory receptor, family 52, subfamily K, member 1...
OR52J3                0.336   olfactory receptor, family 52, subfamily J, member ...
OR51E2                0.332   olfactory receptor, family 51, subfamily E, member 2...
OR51G1                0.331   olfactory receptor, family 51, subfamily G, member 1...
OR51A7                0.331   olfactory receptor, family 51, subfamily A, member 7...
OR51F1                0.331   olfactory receptor, family 51, subfamily F, member 1...
OR52N2                0.329   olfactory receptor, family 52, subfamily N, member 2...
OR52E4                0.326   olfactory receptor, family 52, subfamily E, member 4...
OR52L1                0.324   olfactory receptor, family 52, subfamily L, member ...
OR52N4                0.322   olfactory receptor, family 52, subfamily N, member ...
OR52E2                0.321   olfactory receptor, family 52, subfamily E, member 2...
OR52M1                0.321   olfactory receptor, family 52, subfamily M, member 1...
OR51M1                0.316   olfactory receptor, family 51, subfamily M, member 1...
OR51I2                0.314   olfactory receptor, family 51, subfamily I, member 2...
OR52D1                0.314   olfactory receptor, family 52, subfamily D, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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