| Name: ZCCHC17 | Sequence: fasta or formatted (241aa) | NCBI GI: 21361576 | |
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Description: zinc finger, CCHC domain containing 17
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.1 10 2 C cysteine 2.5 6 1 D aspartate 7.1 17 1 E glutamate 8.3 20 4 F phenylalanine 2.5 6 1 G glycine 6.2 15 2 H histidine 2.9 7 1 I isoleucine 4.1 10 2 K lysine 17.4 42 8 L leucine 3.7 9 1 M methionine 2.9 7 1 N asparagine 3.3 8 2 P proline 4.1 10 1 Q glutamine 2.9 7 1 R arginine 7.1 17 4 S serine 7.9 19 2 T threonine 5.4 13 2 V valine 5.4 13 2 W tryptophan 0.4 1 1 Y tyrosine 1.7 4 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 zinc finger, CCHC domain containing 17 NKAP 0.077 NFKB activating protein NKAPL 0.073 NFKB activating protein-like DHX8 0.068 DEAH (Asp-Glu-Ala-His) box polypeptide 8 SFRS12IP1 0.068 P18SRP protein LOC100133599 0.064 PREDICTED: hypothetical protein PPIG 0.060 peptidylprolyl isomerase G ARL6IP4 0.058 SRp25 nuclear protein isoform 4 ARL6IP4 0.058 SRp25 nuclear protein isoform 2 USP42 0.058 ubiquitin specific peptidase 42 LOC100294088 0.053 PREDICTED: hypothetical protein, partial CYLC1 0.053 cylicin, basic protein of sperm head cytoskeleton 1... LOC100133599 0.051 PREDICTED: hypothetical protein LOC100294364 0.049 PREDICTED: hypothetical protein FAM133B 0.049 hypothetical protein LOC257415 isoform 2 FAM133B 0.049 hypothetical protein LOC257415 isoform 1 ASPH 0.047 aspartate beta-hydroxylase isoform d ASPH 0.047 aspartate beta-hydroxylase isoform e FAM133A 0.047 hypothetical protein LOC286499 SRRM2 0.047 splicing coactivator subunit SRm300 CIR1 0.045 CBF1 interacting corepressor CNGA1 0.045 cyclic nucleotide gated channel alpha 1 isoform 1 [... CNGA1 0.045 cyclic nucleotide gated channel alpha 1 isoform 2 [H... CYLC2 0.045 cylicin 2 ARL6IP4 0.045 SRp25 nuclear protein isoform 3 PRPF40A 0.045 formin binding protein 3 EIF3CL 0.043 eukaryotic translation initiation factor 3, subunit... EIF3C 0.043 eukaryotic translation initiation factor 3, subunit ... EIF3C 0.043 eukaryotic translation initiation factor 3, subunit C... SFRS12 0.043 splicing factor, arginine/serine-rich 12 isoform a ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
