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Search of human proteins with 21361565
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21361565 ATP synthase, H+ transporting, mitochondrial F0
complex, subunit B1 precursor [Homo sapiens]
(256 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21361565 ATP synthase, H+ transporting, mitochondrial F0 comp... 504 e-143
gi|221316624 dystonin isoform 4 [Homo sapiens] 36 0.029
gi|221316622 dystonin isoform 3 [Homo sapiens] 36 0.029
gi|221316618 dystonin isoform 2 [Homo sapiens] 36 0.029
gi|34577047 dystonin isoform 1 [Homo sapiens] 36 0.029
gi|20357504 dystonin isoform 1eB precursor [Homo sapiens] 36 0.029
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens] 36 0.029
gi|4502443 dystonin isoform 1e precursor [Homo sapiens] 36 0.029
gi|150010604 kinesin family member 4B [Homo sapiens] 33 0.19
gi|116686122 kinesin family member 4 [Homo sapiens] 33 0.32
gi|115648142 centrosomal protein 164kDa [Homo sapiens] 32 0.41
gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens] 32 0.54
gi|4557701 keratin 17 [Homo sapiens] 31 0.92
gi|4506813 sodium channel, voltage-gated, type IX, alpha [Homo s... 31 1.2
gi|146260271 hypothetical protein LOC129881 [Homo sapiens] 31 1.2
gi|27597059 DnaJ homolog, subfamily C, member 9 [Homo sapiens] 31 1.2
gi|41281453 serine/threonine kinase 2 [Homo sapiens] 30 1.6
gi|11386139 phospholipase C beta 3 [Homo sapiens] 30 2.1
gi|32698688 citron [Homo sapiens] 30 2.1
gi|56961680 coiled-coil domain containing 147 [Homo sapiens] 30 2.1
gi|215272412 ataxin 2-binding protein 1 isoform 4 [Homo sapiens] 30 2.7
gi|215272410 ataxin 2-binding protein 1 isoform 5 [Homo sapiens] 30 2.7
gi|22538409 ataxin 2-binding protein 1 isoform 3 [Homo sapiens] 30 2.7
gi|22538407 ataxin 2-binding protein 1 isoform 2 [Homo sapiens] 30 2.7
gi|22538405 ataxin 2-binding protein 1 isoform 1 [Homo sapiens] 30 2.7
gi|22538403 ataxin 2-binding protein 1 isoform 4 [Homo sapiens] 30 2.7
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 30 2.7
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 30 2.7
gi|157388975 coiled-coil domain containing 99 [Homo sapiens] 30 2.7
gi|21686999 OMA1 homolog, zinc metallopeptidase [Homo sapiens] 29 3.5
>gi|21361565 ATP synthase, H+ transporting, mitochondrial F0
complex, subunit B1 precursor [Homo sapiens]
Length = 256
Score = 504 bits (1298), Expect = e-143
Identities = 256/256 (100%), Positives = 256/256 (100%)
Query: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP
Sbjct: 1 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 60
Query: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIKKYGPFV 120
EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIKKYGPFV
Sbjct: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIKKYGPFV 120
Query: 121 ADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEV 180
ADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEV
Sbjct: 121 ADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEV 180
Query: 181 TYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCI 240
TYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCI
Sbjct: 181 TYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCI 240
Query: 241 ADLKLLAKKAQAQPVM 256
ADLKLLAKKAQAQPVM
Sbjct: 241 ADLKLLAKKAQAQPVM 256
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 36.2 bits (82), Expect = 0.029
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIKKYGPFV 120
EEFF + V P + ++ ++Y +S+ L + +++ +
Sbjct: 1160 EEFFSQAAASSSV--PTLRSELNVVLQNMNQVYSMSSTYIDKLKTVNLVLKNTQ-----A 1212
Query: 121 ADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEV 180
A+ KL E KL + EEA A +I+N I T K ++ V ++ +F + + A +
Sbjct: 1213 AEALVKLYETKLCE-EEAVIADKNNIENLISTLKQWRSEVDEKRQVFHALEDELQKAKAI 1271
Query: 181 TYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHV 223
+ + +++ YKE D+H + K + + W HV
Sbjct: 1272 S--DEMFKTYKERDLDFDWH-------KEKADQLVERWQNVHV 1305
>gi|221316622 dystonin isoform 3 [Homo sapiens]
Length = 5537
Score = 36.2 bits (82), Expect = 0.029
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIKKYGPFV 120
EEFF + V P + ++ ++Y +S+ L + +++ +
Sbjct: 1171 EEFFSQAAASSSV--PTLRSELNVVLQNMNQVYSMSSTYIDKLKTVNLVLKNTQ-----A 1223
Query: 121 ADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEV 180
A+ KL E KL + EEA A +I+N I T K ++ V ++ +F + + A +
Sbjct: 1224 AEALVKLYETKLCE-EEAVIADKNNIENLISTLKQWRSEVDEKRQVFHALEDELQKAKAI 1282
Query: 181 TYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHV 223
+ + +++ YKE D+H + K + + W HV
Sbjct: 1283 S--DEMFKTYKERDLDFDWH-------KEKADQLVERWQNVHV 1316
>gi|221316618 dystonin isoform 2 [Homo sapiens]
Length = 5675
Score = 36.2 bits (82), Expect = 0.029
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIKKYGPFV 120
EEFF + V P + ++ ++Y +S+ L + +++ +
Sbjct: 1309 EEFFSQAAASSSV--PTLRSELNVVLQNMNQVYSMSSTYIDKLKTVNLVLKNTQ-----A 1361
Query: 121 ADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEV 180
A+ KL E KL + EEA A +I+N I T K ++ V ++ +F + + A +
Sbjct: 1362 AEALVKLYETKLCE-EEAVIADKNNIENLISTLKQWRSEVDEKRQVFHALEDELQKAKAI 1420
Query: 181 TYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHV 223
+ + +++ YKE D+H + K + + W HV
Sbjct: 1421 S--DEMFKTYKERDLDFDWH-------KEKADQLVERWQNVHV 1454
>gi|34577047 dystonin isoform 1 [Homo sapiens]
Length = 5497
Score = 36.2 bits (82), Expect = 0.029
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIKKYGPFV 120
EEFF + V P + ++ ++Y +S+ L + +++ +
Sbjct: 1131 EEFFSQAAASSSV--PTLRSELNVVLQNMNQVYSMSSTYIDKLKTVNLVLKNTQ-----A 1183
Query: 121 ADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEV 180
A+ KL E KL + EEA A +I+N I T K ++ V ++ +F + + A +
Sbjct: 1184 AEALVKLYETKLCE-EEAVIADKNNIENLISTLKQWRSEVDEKRQVFHALEDELQKAKAI 1242
Query: 181 TYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHV 223
+ + +++ YKE D+H + K + + W HV
Sbjct: 1243 S--DEMFKTYKERDLDFDWH-------KEKADQLVERWQNVHV 1276
>gi|20357504 dystonin isoform 1eB precursor [Homo sapiens]
Length = 3062
Score = 36.2 bits (82), Expect = 0.029
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIKKYGPFV 120
EEFF + V P + ++ ++Y +S+ L + +++ +
Sbjct: 805 EEFFSQAAASSSV--PTLRSELNVVLQNMNQVYSMSSTYIDKLKTVNLVLKNTQ-----A 857
Query: 121 ADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEV 180
A+ KL E KL + EEA A +I+N I T K ++ V ++ +F + + A +
Sbjct: 858 AEALVKLYETKLCE-EEAVIADKNNIENLISTLKQWRSEVDEKRQVFHALEDELQKAKAI 916
Query: 181 TYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHV 223
+ + +++ YKE D+H + K + + W HV
Sbjct: 917 S--DEMFKTYKERDLDFDWH-------KEKADQLVERWQNVHV 950
>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
Length = 5171
Score = 36.2 bits (82), Expect = 0.029
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIKKYGPFV 120
EEFF + V P + ++ ++Y +S+ L + +++ +
Sbjct: 805 EEFFSQAAASSSV--PTLRSELNVVLQNMNQVYSMSSTYIDKLKTVNLVLKNTQ-----A 857
Query: 121 ADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEV 180
A+ KL E KL + EEA A +I+N I T K ++ V ++ +F + + A +
Sbjct: 858 AEALVKLYETKLCE-EEAVIADKNNIENLISTLKQWRSEVDEKRQVFHALEDELQKAKAI 916
Query: 181 TYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHV 223
+ + +++ YKE D+H + K + + W HV
Sbjct: 917 S--DEMFKTYKERDLDFDWH-------KEKADQLVERWQNVHV 950
>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
Length = 2649
Score = 36.2 bits (82), Expect = 0.029
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 61 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIKKYGPFV 120
EEFF + V P + ++ ++Y +S+ L + +++ +
Sbjct: 805 EEFFSQAAASSSV--PTLRSELNVVLQNMNQVYSMSSTYIDKLKTVNLVLKNTQ-----A 857
Query: 121 ADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEV 180
A+ KL E KL + EEA A +I+N I T K ++ V ++ +F + + A +
Sbjct: 858 AEALVKLYETKLCE-EEAVIADKNNIENLISTLKQWRSEVDEKRQVFHALEDELQKAKAI 916
Query: 181 TYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHV 223
+ + +++ YKE D+H + K + + W HV
Sbjct: 917 S--DEMFKTYKERDLDFDWH-------KEKADQLVERWQNVHV 950
>gi|150010604 kinesin family member 4B [Homo sapiens]
Length = 1234
Score = 33.5 bits (75), Expect = 0.19
Identities = 35/168 (20%), Positives = 65/168 (38%), Gaps = 39/168 (23%)
Query: 120 VADFADKLNEQ-KLAQLEEAKQASIQHIQNAI----------------DTEKSQQALVQK 162
+AD KLNEQ KL +L+E+ + ++ + I D EK +Q +K
Sbjct: 609 IADLKKKLNEQSKLLKLKESTERTVSKLNQEIWMMKNQRVQLMRQMKEDAEKFRQWKQKK 668
Query: 163 RHYLFDVQRNNIAMALEVTYRERLYRVYKEVKNRLDYHISVQNMM--------------R 208
+ ++ + E+ ER ++ V R + N R
Sbjct: 669 DKEVIQLKERDRKRQYELLKLERNFQKQSSVLRRKTEEAAAANKRLKDALQKQREVTDKR 728
Query: 209 RKEQEH--------MINWVEKHVVQSISTQQEKETIAKCIADLKLLAK 248
++ Q H + NW+ + +ST++ K + + D K+LA+
Sbjct: 729 KETQSHGKEGIAARVRNWLGNEIEVMVSTEEAKRHLNDLLEDRKILAQ 776
>gi|116686122 kinesin family member 4 [Homo sapiens]
Length = 1232
Score = 32.7 bits (73), Expect = 0.32
Identities = 34/172 (19%), Positives = 69/172 (40%), Gaps = 47/172 (27%)
Query: 120 VADFADKLNEQ-KLAQLEEAKQASIQHIQNAIDTEKSQQALVQK-------RHYLFDVQR 171
+AD KLNEQ KL +L+E+ + ++ + I K+Q+ + + + + ++
Sbjct: 609 IADLKKKLNEQSKLLKLKESTERTVSKLNQEIRMMKNQRVQLMRQMKEDAEKFRQWKQKK 668
Query: 172 NNIAMALEVTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQE------------------ 213
+ + L+ R+R Y + K +N N++RRK +E
Sbjct: 669 DKEVIQLKERDRKRQYELLKLERN----FQKQSNVLRRKTEEAAAANKRLKDALQKQREV 724
Query: 214 -----------------HMINWVEKHVVQSISTQQEKETIAKCIADLKLLAK 248
+ NW+ + +ST++ K + + D K+LA+
Sbjct: 725 ADKRKETQSRGMEGTAARVKNWLGNEIEVMVSTEEAKRHLNDLLEDRKILAQ 776
>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
Length = 1460
Score = 32.3 bits (72), Expect = 0.41
Identities = 28/129 (21%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query: 125 DKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEVTYRE 184
++L+E L +EEA ++ Q + E Q+ + Q R L + I + +
Sbjct: 585 EQLSEAALKAMEEAVAQVLEQDQRHL-LESKQEKMQQLREKLCQEEEEEI-----LRLHQ 638
Query: 185 RLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADLK 244
+ + ++ RL I + R+E+ ++W+ VQS + E + A+ A L+
Sbjct: 639 QKEQSLSSLRERLQKAIEEEEARMREEESQRLSWLRAQ-VQSSTQADEDQIRAEQEASLQ 697
Query: 245 LLAKKAQAQ 253
L ++ ++Q
Sbjct: 698 KLREELESQ 706
Score = 28.1 bits (61), Expect = 7.8
Identities = 26/124 (20%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 130 QKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLYRV 189
Q+L+ L Q+S Q ++ I E Q+A +QK + Q+ +LE R+ L ++
Sbjct: 668 QRLSWLRAQVQSSTQADEDQIRAE--QEASLQKLREELESQQKAERASLEQKNRQMLEQL 725
Query: 190 YKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADLKLLAKK 249
+E++ + N + K + + +E ++++T +++ + A+L+ L
Sbjct: 726 KEEIEASEKSEQAALNAAKEKALQQLREQLEGERKEAVATLEKEHS-----AELERLCSS 780
Query: 250 AQAQ 253
+A+
Sbjct: 781 LEAK 784
>gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens]
Length = 898
Score = 32.0 bits (71), Expect = 0.54
Identities = 26/118 (22%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 125 DKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEVTYRE 184
D L E+ + E KQ ++T K ++ +++ + R+ + +A +VT +
Sbjct: 231 DNLREELKKRTETEKQH--------MNTIKQLESRIEELNKEVKASRDQL-IAQDVTAKN 281
Query: 185 RLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIAD 242
+ +++KE+ R++ + + R+E+E M+ + +S+ ++EKET+ K + D
Sbjct: 282 AVQQLHKEMAQRME-QANKKCEEARQEKEAMVMKYVRGEKESLDLRKEKETLEKKLRD 338
>gi|4557701 keratin 17 [Homo sapiens]
Length = 432
Score = 31.2 bits (69), Expect = 0.92
Identities = 24/135 (17%), Positives = 60/135 (44%), Gaps = 17/135 (12%)
Query: 129 EQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIA------------M 176
+ ++++L QA +Q+ + + S + + + + VQ + I +
Sbjct: 297 KSEISELRRTMQALEIELQSQLSMKASLEGNLAETENRYCVQLSQIQGLIGSVEEQLAQL 356
Query: 177 ALEVTYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETI 236
E+ + + Y++ +VK RL+ I+ + E H+ + ++ V T ++ TI
Sbjct: 357 RCEMEQQNQEYKILLDVKTRLEQEIATYRRLLEGEDAHLTQYKKEPV-----TTRQVRTI 411
Query: 237 AKCIADLKLLAKKAQ 251
+ + D K+++ + Q
Sbjct: 412 VEEVQDGKVISSREQ 426
>gi|4506813 sodium channel, voltage-gated, type IX, alpha [Homo
sapiens]
Length = 1977
Score = 30.8 bits (68), Expect = 1.2
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 13/147 (8%)
Query: 96 SAETFTALSVLGVMVYGIKKYGPFVADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKS 155
+ +T+ V+ + + +A A EQ A +EEAKQ ++ Q +D K
Sbjct: 374 AGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEAKQKELE-FQQMLDRLKK 432
Query: 156 QQ----ALVQKRHYLFDVQRNNIAMALEVTYRERLYRVYKEVKNRLDYHISVQNMMRRKE 211
+Q A+ ++R+ I M L + E K K R +N ++K
Sbjct: 433 EQEEAEAIAAAAAEYTSIRRSRI-MGLSESSSETSKLSSKSAKER-------RNRRKKKN 484
Query: 212 QEHMINWVEKHVVQSISTQQEKETIAK 238
Q+ + + EK + +S + +++I +
Sbjct: 485 QKKLSSGEEKGDAEKLSKSESEDSIRR 511
>gi|146260271 hypothetical protein LOC129881 [Homo sapiens]
Length = 552
Score = 30.8 bits (68), Expect = 1.2
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 126 KLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAM--ALEVTYR 183
KLN +K + E+ K + A+ + +Q K H + +R A E+ +
Sbjct: 190 KLNIEKAFKEEQEKAEKRHRERVALAKDHLKQI---KEHEEEEERRKKYEEKDAEEIKRQ 246
Query: 184 ERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADL 243
LY + E++ +L+ + RR+ EHM +KH+++++ QQ++E K +
Sbjct: 247 NALYEI--EMRKKLEKKREEMHESRRRFLEHM---QDKHIIKAVEQQQQEEEDEKMRKFI 301
Query: 244 KLLAKKAQAQ 253
K AKK Q
Sbjct: 302 K--AKKRLIQ 309
>gi|27597059 DnaJ homolog, subfamily C, member 9 [Homo sapiens]
Length = 260
Score = 30.8 bits (68), Expect = 1.2
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 113 IKKYGPFVADFADKLNEQKLAQLEEAKQASIQHIQNAIDT-EKSQQALVQKRHYLFDVQR 171
+ Y FV + K+N +K EEAK+A + + +D S +A +Q R +
Sbjct: 172 VPSYNAFVKESKQKMNARKRRAQEEAKEAEMSRKELGLDEGVDSLKAAIQSRQKDRQKEM 231
Query: 172 NNIAMALEVTY 182
+N +E Y
Sbjct: 232 DNFLAQMEAKY 242
>gi|41281453 serine/threonine kinase 2 [Homo sapiens]
Length = 1235
Score = 30.4 bits (67), Expect = 1.6
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 12/107 (11%)
Query: 126 KLNEQKLAQLEEAK-----QASIQHIQNAIDTEKSQQALVQKRHYLFDV-----QRNNIA 175
+L E + Q EE + + +Q + I Q+ + +KR Y ++ Q+
Sbjct: 830 ELRELRFLQKEEQRAQQQLNSKLQQQREQIFRRFEQEMMSKKRQYDQEIENLEKQQKQTI 889
Query: 176 MALEVTYRERLYRVYKEVKNRLDYHIS-VQNMMRRKEQEHMINWVEK 221
LE + RL K +K + +S QNM++ +++E +IN VEK
Sbjct: 890 ERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLKNRKKE-VINEVEK 935
>gi|11386139 phospholipase C beta 3 [Homo sapiens]
Length = 1234
Score = 30.0 bits (66), Expect = 2.1
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 19/130 (14%)
Query: 114 KKYGPFVADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNN 173
K+Y F L E + AQ++ Q ++H+ +QAL + R + D
Sbjct: 1029 KRYQEFQNRQVQSLLELREAQVDAEAQRRLEHL---------RQALQRLREVVLDANTTQ 1079
Query: 174 IAMALEVTYRERLYRVYKEVKNRLD--YHISVQNMMRR---KEQEHMINWVEKHVVQSIS 228
E+ RE+ KE++ LD H S+ R K++ + +H+ +S++
Sbjct: 1080 FKRLKEMNEREK-----KELQKILDRKRHNSISEAKMRDKHKKEAELTEINRRHITESVN 1134
Query: 229 TQQEKETIAK 238
+ + E K
Sbjct: 1135 SIRRLEEAQK 1144
>gi|32698688 citron [Homo sapiens]
Length = 2027
Score = 30.0 bits (66), Expect = 2.1
Identities = 20/93 (21%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 130 QKLAQLEEAKQASIQHIQNAIDTEKS------QQALVQKRHYLFDVQRNNIAMAL---EV 180
Q + Q +E + ++ +QN D+ + + ++++H V ++ + L E
Sbjct: 660 QNIRQAKERAERELEKLQNREDSSEGIRKKLVEAEELEEKHREAQVSAQHLEVHLKQKEQ 719
Query: 181 TYRERLYRVYKEVKNRLDYHISVQNMMRRKEQE 213
Y E++ + ++K L +++NMM+R E+E
Sbjct: 720 HYEEKIKVLDNQIKKDLADKETLENMMQRHEEE 752
>gi|56961680 coiled-coil domain containing 147 [Homo sapiens]
Length = 872
Score = 30.0 bits (66), Expect = 2.1
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 19/169 (11%)
Query: 88 LSKEIYVISAETFTALSVLGVMVYGIKKYGPFVADFADKLNEQKLAQLEEAKQASIQHIQ 147
L KE+ I A+ + + + + ++K + +L EQK+ AK+ ++
Sbjct: 221 LEKELKQIQADMDSRQTEIKALQQYVQKSKEELQKLEQQLKEQKILNERAAKELEQFQMR 280
Query: 148 NA-IDTEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLYRVYKEVKNRLDYHISVQNM 206
NA + E Q +LV ++ + + N ALE+ +E E +++ I N
Sbjct: 281 NAKLQQENEQHSLVCEQ-----LSQENQQKALELKAKE-------EEVHQMRLDIGKLNK 328
Query: 207 MRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADL--KLLAKKAQAQ 253
+R + + + + + Q +Q KET+ I L ++ A K QA+
Sbjct: 329 IREQIHKKLHHTED----QKAEVEQHKETLKNQIVGLEREVEASKKQAE 373
>gi|215272412 ataxin 2-binding protein 1 isoform 4 [Homo sapiens]
Length = 397
Score = 29.6 bits (65), Expect = 2.7
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 10 AATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKV 54
AATAA + + A G G RT + P PP+P YGG V
Sbjct: 260 AATAAAAYRGAHLRGRG-----RTVYNTFRAAAPPPPIPAYGGVV 299
>gi|215272410 ataxin 2-binding protein 1 isoform 5 [Homo sapiens]
Length = 370
Score = 29.6 bits (65), Expect = 2.7
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 10 AATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKV 54
AATAA + + A G G RT + P PP+P YGG V
Sbjct: 233 AATAAAAYRGAHLRGRG-----RTVYNTFRAAAPPPPIPAYGGVV 272
>gi|22538409 ataxin 2-binding protein 1 isoform 3 [Homo sapiens]
Length = 395
Score = 29.6 bits (65), Expect = 2.7
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 10 AATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKV 54
AATAA + + A G G RT + P PP+P YGG V
Sbjct: 280 AATAAAAYRGAHLRGRG-----RTVYNTFRAAAPPPPIPAYGGVV 319
>gi|22538407 ataxin 2-binding protein 1 isoform 2 [Homo sapiens]
Length = 392
Score = 29.6 bits (65), Expect = 2.7
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 10 AATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKV 54
AATAA + + A G G RT + P PP+P YGG V
Sbjct: 280 AATAAAAYRGAHLRGRG-----RTVYNTFRAAAPPPPIPAYGGVV 319
>gi|22538405 ataxin 2-binding protein 1 isoform 1 [Homo sapiens]
Length = 418
Score = 29.6 bits (65), Expect = 2.7
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 10 AATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKV 54
AATAA + + A G G RT + P PP+P YGG V
Sbjct: 280 AATAAAAYRGAHLRGRG-----RTVYNTFRAAAPPPPIPAYGGVV 319
>gi|22538403 ataxin 2-binding protein 1 isoform 4 [Homo sapiens]
Length = 397
Score = 29.6 bits (65), Expect = 2.7
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 10 AATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKV 54
AATAA + + A G G RT + P PP+P YGG V
Sbjct: 260 AATAAAAYRGAHLRGRG-----RTVYNTFRAAAPPPPIPAYGGVV 299
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 29.6 bits (65), Expect = 2.7
Identities = 23/107 (21%), Positives = 53/107 (49%), Gaps = 24/107 (22%)
Query: 133 AQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLYRVYKE 192
A L +AKQ + H QQ L ++ H L D Q+ +++++ + +VY+
Sbjct: 261 ADLLQAKQQILTH----------QQQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKVYEM 310
Query: 193 VKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSIST---QQEKETI 236
+++ V+N + + QE ++ +++ ++T ++EK+T+
Sbjct: 311 EQDK-----KVENSNKEEIQE------KETIIEELNTKIIEEEKKTL 346
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 29.6 bits (65), Expect = 2.7
Identities = 23/107 (21%), Positives = 53/107 (49%), Gaps = 24/107 (22%)
Query: 133 AQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLYRVYKE 192
A L +AKQ + H QQ L ++ H L D Q+ +++++ + +VY+
Sbjct: 261 ADLLQAKQQILTH----------QQQLEEQDHLLEDYQKKKEDFTMQISFLQEKIKVYEM 310
Query: 193 VKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSIST---QQEKETI 236
+++ V+N + + QE ++ +++ ++T ++EK+T+
Sbjct: 311 EQDK-----KVENSNKEEIQE------KETIIEELNTKIIEEEKKTL 346
>gi|157388975 coiled-coil domain containing 99 [Homo sapiens]
Length = 605
Score = 29.6 bits (65), Expect = 2.7
Identities = 24/110 (21%), Positives = 53/110 (48%), Gaps = 13/110 (11%)
Query: 114 KKYGPFVADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEK------SQQALVQKRHYLF 167
+ +G V + K+ + K+ +L+EA+ + Q +++ +D +K S++ V
Sbjct: 100 RSHGQEVNELKTKIEKLKV-ELDEARLSEKQ-LKHQVDHQKELLSCKSEELRVMSERVQE 157
Query: 168 DVQRNNIAMALEVTYRERLYRVYKEVKNRLDY-----HISVQNMMRRKEQ 212
+ +A+ +E+T E + KE N L Y + + N+MR+ ++
Sbjct: 158 SMSSEMLALQIELTEMESMKTTLKEEVNELQYRQEQLELLITNLMRQVDR 207
>gi|21686999 OMA1 homolog, zinc metallopeptidase [Homo sapiens]
Length = 524
Score = 29.3 bits (64), Expect = 3.5
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 3 SRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTG-QPHLVPVPPL 47
SR +L TA PSL L P ++A R FHT + PVP L
Sbjct: 105 SRQLLIKEVTAVPSLSVLHPLSPASIRAIRNFHTSPRFQAAPVPLL 150
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,731,265
Number of Sequences: 37866
Number of extensions: 390199
Number of successful extensions: 1340
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 1328
Number of HSP's gapped (non-prelim): 63
length of query: 256
length of database: 18,247,518
effective HSP length: 100
effective length of query: 156
effective length of database: 14,460,918
effective search space: 2255903208
effective search space used: 2255903208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.