Guide to the Human Genome
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Search of human proteins with 21281683

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21281683 multiple coagulation factor deficiency 2 [Homo
sapiens]
         (146 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21281683 multiple coagulation factor deficiency 2 [Homo sapiens]   302   8e-83
gi|33589824 cell growth regulator with EF-hand domain 1 [Homo sa...    46   1e-05
gi|5453708 DNA-dependent protein kinase catalytic subunit-intera...    45   3e-05
gi|71274156 calcium and integrin binding family member 4 [Homo s...    41   4e-04
gi|153945858 guanylate cyclase activator 1B (retina) [Homo sapiens]    39   0.002
gi|40254415 guanylate cyclase activator 1A (retina) [Homo sapiens]     38   0.003
gi|215983090 guanylate cyclase activator 1C [Homo sapiens]             38   0.003
gi|4507617 fast skeletal muscle troponin C [Homo sapiens]              37   0.005
gi|11545811 hepatocellular carcinoma antigen gene 520 [Homo sapi...    37   0.005
gi|4826870 nucleobindin 2 [Homo sapiens]                               37   0.006
gi|163644313 calcium and integrin binding 1 [Homo sapiens]             37   0.006
gi|4507615 troponin C, slow [Homo sapiens]                             35   0.023
gi|148613876 EF hand domain family, member B [Homo sapiens]            35   0.023
gi|19913443 hippocalcin-like 1 [Homo sapiens]                          35   0.029
gi|19913441 hippocalcin-like 1 [Homo sapiens]                          35   0.029
gi|153946409 calbindin 2 isoform 1 [Homo sapiens]                      34   0.039
gi|6031162 calbindin 2 isoform 22k [Homo sapiens]                      34   0.039
gi|58218968 calmodulin 3 [Homo sapiens]                                34   0.039
gi|4885111 calmodulin-like 3 [Homo sapiens]                            34   0.039
gi|4502549 calmodulin 2 [Homo sapiens]                                 34   0.039
gi|5901912 calmodulin 1 [Homo sapiens]                                 34   0.039
gi|21361559 visinin-like 1 [Homo sapiens]                              34   0.050
gi|78190478 Kv channel interacting protein 1 isoform 3 [Homo sap...    34   0.050
gi|78190480 Kv channel interacting protein 1 isoform 1 [Homo sap...    34   0.050
gi|7657247 Kv channel interacting protein 1 isoform 2 [Homo sapi...    34   0.050
gi|20070228 nucleobindin 1 [Homo sapiens]                              33   0.066
gi|19913446 hippocalcin [Homo sapiens]                                 33   0.11 
gi|7705419 hippocalcin-like protein 4 [Homo sapiens]                   32   0.15 
gi|32698688 citron [Homo sapiens]                                      32   0.19 
gi|223278387 calmodulin-like 5 [Homo sapiens]                          31   0.33 

>gi|21281683 multiple coagulation factor deficiency 2 [Homo sapiens]
          Length = 146

 Score =  302 bits (773), Expect = 8e-83
 Identities = 146/146 (100%), Positives = 146/146 (100%)

Query: 1   MTMRSLLRTPFLCGLLWAFCAPGARAEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVI 60
           MTMRSLLRTPFLCGLLWAFCAPGARAEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVI
Sbjct: 1   MTMRSLLRTPFLCGLLWAFCAPGARAEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVI 60

Query: 61  NKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINI 120
           NKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINI
Sbjct: 61  NKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINI 120

Query: 121 IDGVLRDDDKNNDGYIDYAEFAKSLQ 146
           IDGVLRDDDKNNDGYIDYAEFAKSLQ
Sbjct: 121 IDGVLRDDDKNNDGYIDYAEFAKSLQ 146


>gi|33589824 cell growth regulator with EF-hand domain 1 [Homo
           sapiens]
          Length = 301

 Score = 45.8 bits (107), Expect = 1e-05
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)

Query: 67  MSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLR 126
           +S +++ L+ F +HDYD +  LDGLEL + +T      G+  +P  + + +I I+D VL 
Sbjct: 68  LSREQVLLYLFALHDYDQSGQLDGLELLSMLT-AALAPGAANSP--TTNPVILIVDKVLE 124

Query: 127 DDDKNNDGYIDYAE 140
             D N DG +  AE
Sbjct: 125 TQDLNGDGLMTPAE 138


>gi|5453708 DNA-dependent protein kinase catalytic
           subunit-interacting protein 2 [Homo sapiens]
          Length = 187

 Score = 44.7 bits (104), Expect = 3e-05
 Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 19/116 (16%)

Query: 27  EEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHY-FKMHDYDGN 85
           E   A+FS+ G   L  N   D   ++            E +P+EL+ +Y FK++D++ +
Sbjct: 72  ERIVAAFSEDGEGNLTFNDFVDMFSVL-----------CESAPRELKANYAFKIYDFNTD 120

Query: 86  NLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEF 141
           N +   +L   +  + K E       + E+E++ + D V+ + D + DG + +A+F
Sbjct: 121 NFICKEDLELTLARLTKSE-------LDEEEVVLVCDKVIEEADLDGDGKLGFADF 169


>gi|71274156 calcium and integrin binding family member 4 [Homo
           sapiens]
          Length = 185

 Score = 40.8 bits (94), Expect = 4e-04
 Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 18/152 (11%)

Query: 6   LLRTPFLC--GLLWAFCAPGARAEEPAASFSQPGSM-GLDKNTVHDQE-HIMEH-----L 56
           L R   LC        C PG   +E   +  Q  S+  L  N   D+   +  H      
Sbjct: 23  LTRNEILCIHDTFLKLCPPGKYYKEATLTMDQVSSLPALRVNPFRDRICRVFSHKGMFSF 82

Query: 57  EGVINKPE--AEMSPQELQLHY-FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMS 113
           E V+      +E +   L++ Y F+++D++ N  +D  +L   I  +   +       MS
Sbjct: 83  EDVLGMASVFSEQACPSLKIEYAFRIYDFNENGFIDEEDLQRIILRLLNSDD------MS 136

Query: 114 EDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 145
           ED L+++ + VL + D +ND  + ++EF  ++
Sbjct: 137 EDLLMDLTNHVLSESDLDNDNMLSFSEFEHAM 168


>gi|153945858 guanylate cyclase activator 1B (retina) [Homo sapiens]
          Length = 200

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 10/74 (13%)

Query: 77  FKMHDYDGNNLLDGLELSTAITHVH-------KEEGSEQAPLMSEDELINIIDGVLRDDD 129
           FK++D DGN  +D LEL   +  ++       +E  +EQ  L++ +E   ++D +    D
Sbjct: 98  FKIYDKDGNGCIDRLELLNIVEGIYQLKKACRRELQTEQGQLLTPEE---VVDRIFLLVD 154

Query: 130 KNNDGYIDYAEFAK 143
           +N DG +   EF +
Sbjct: 155 ENGDGQLSLNEFVE 168



 Score = 28.5 bits (62), Expect = 2.1
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 114 EDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 145
           ++E    ++G+ R  DKN D  ID+ E+  +L
Sbjct: 51  DEEASQYVEGMFRAFDKNGDNTIDFLEYVAAL 82


>gi|40254415 guanylate cyclase activator 1A (retina) [Homo sapiens]
          Length = 201

 Score = 37.7 bits (86), Expect = 0.003
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 4/71 (5%)

Query: 76  YFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGY 135
           YFK++D DGN  +D  EL T I  +          + +E+      D V    D N DG 
Sbjct: 95  YFKLYDVDGNGCIDRDELLTIIQAIRAINPCSDTTMTAEE----FTDTVFSKIDVNGDGE 150

Query: 136 IDYAEFAKSLQ 146
           +   EF + +Q
Sbjct: 151 LSLEEFIEGVQ 161


>gi|215983090 guanylate cyclase activator 1C [Homo sapiens]
          Length = 209

 Score = 37.7 bits (86), Expect = 0.003
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 76  YFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGY 135
           YFK++D DGN  +D  EL      V    G +    +S +E IN+   V    D NNDG 
Sbjct: 96  YFKLYDADGNGSIDKNELLDMFMAVQALNGQQ---TLSPEEFINL---VFHKIDINNDGE 149

Query: 136 IDYAEFAKSL 145
           +   EF   +
Sbjct: 150 LTLEEFINGM 159


>gi|4507617 fast skeletal muscle troponin C [Homo sapiens]
          Length = 160

 Score = 37.4 bits (85), Expect = 0.005
 Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 12/85 (14%)

Query: 62  KPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINII 121
           K +A+   +E     F++ D + +  +D  EL+     + +  G      ++++E    I
Sbjct: 85  KEDAKGKSEEELAECFRIFDRNADGYIDPEELA----EIFRASGEH----VTDEE----I 132

Query: 122 DGVLRDDDKNNDGYIDYAEFAKSLQ 146
           + +++D DKNNDG ID+ EF K ++
Sbjct: 133 ESLMKDGDKNNDGRIDFDEFLKMME 157


>gi|11545811 hepatocellular carcinoma antigen gene 520 [Homo
           sapiens]
          Length = 196

 Score = 37.4 bits (85), Expect = 0.005
 Identities = 23/86 (26%), Positives = 48/86 (55%), Gaps = 9/86 (10%)

Query: 62  KPEAEMSPQELQLHY-FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINI 120
           KPE  ++ +  +LHY F+++D D +  +   E+   +  +   +       ++E++L NI
Sbjct: 105 KPEP-LNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQ-------VTEEQLENI 156

Query: 121 IDGVLRDDDKNNDGYIDYAEFAKSLQ 146
            D  +++ D++ DG + + EF KSL+
Sbjct: 157 ADRTVQEADEDGDGAVSFVEFTKSLE 182


>gi|4826870 nucleobindin 2 [Homo sapiens]
          Length = 420

 Score = 37.0 bits (84), Expect = 0.006
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 4/75 (5%)

Query: 76  YFKMHDYDGNNLLDGLELSTAIT----HVHKEEGSEQAPLMSEDELINIIDGVLRDDDKN 131
           +FK+HD + +  LD  EL    T     V+  +  E   +  E+E + + + V+ + D N
Sbjct: 249 FFKLHDVNSDGFLDEQELEALFTKELEKVYDPKNEEDDMVEMEEERLRMREHVMNEVDTN 308

Query: 132 NDGYIDYAEFAKSLQ 146
            D  +   EF K+ +
Sbjct: 309 KDRLVTLEEFLKATE 323


>gi|163644313 calcium and integrin binding 1 [Homo sapiens]
          Length = 191

 Score = 37.0 bits (84), Expect = 0.006
 Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 4/78 (5%)

Query: 65  AEMSPQELQLHY-FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDG 123
           ++ +  +++ HY F++ D+D +  L+  +LS  +  +    G  +   +S  E+  +ID 
Sbjct: 99  SDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCL---TGEGEDTRLSASEMKQLIDN 155

Query: 124 VLRDDDKNNDGYIDYAEF 141
           +L + D + DG I+ +EF
Sbjct: 156 ILEESDIDRDGTINLSEF 173


>gi|4507615 troponin C, slow [Homo sapiens]
          Length = 161

 Score = 35.0 bits (79), Expect = 0.023
 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 12/85 (14%)

Query: 62  KPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINII 121
           K +++   +E     F+M D + +  +D  EL   +              ++ED+    I
Sbjct: 86  KDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIML--------QATGETITEDD----I 133

Query: 122 DGVLRDDDKNNDGYIDYAEFAKSLQ 146
           + +++D DKNNDG IDY EF + ++
Sbjct: 134 EELMKDGDKNNDGRIDYDEFLEFMK 158


>gi|148613876 EF hand domain family, member B [Homo sapiens]
          Length = 833

 Score = 35.0 bits (79), Expect = 0.023
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 12/69 (17%)

Query: 77  FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYI 136
           F+ +D  G+ ++D  EL         +E  +QA L  +D+L+   D +    D +NDG+I
Sbjct: 570 FRHYDKKGDGMIDKDEL---------QEACDQANLSLDDKLL---DQLFDYCDVDNDGFI 617

Query: 137 DYAEFAKSL 145
           +Y EFA  L
Sbjct: 618 NYLEFANFL 626


>gi|19913443 hippocalcin-like 1 [Homo sapiens]
          Length = 193

 Score = 34.7 bits (78), Expect = 0.029
 Identities = 19/67 (28%), Positives = 28/67 (41%)

Query: 77  FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYI 136
           F M+D DGN  +   E+   +  ++K   S       E       D + R  D NNDG +
Sbjct: 105 FSMYDLDGNGYISRSEMLEIVQAIYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNNDGKL 164

Query: 137 DYAEFAK 143
              EF +
Sbjct: 165 SLEEFIR 171


>gi|19913441 hippocalcin-like 1 [Homo sapiens]
          Length = 193

 Score = 34.7 bits (78), Expect = 0.029
 Identities = 19/67 (28%), Positives = 28/67 (41%)

Query: 77  FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYI 136
           F M+D DGN  +   E+   +  ++K   S       E       D + R  D NNDG +
Sbjct: 105 FSMYDLDGNGYISRSEMLEIVQAIYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNNDGKL 164

Query: 137 DYAEFAK 143
              EF +
Sbjct: 165 SLEEFIR 171


>gi|153946409 calbindin 2 isoform 1 [Homo sapiens]
          Length = 271

 Score = 34.3 bits (77), Expect = 0.039
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 65  AEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHK-EEGSEQAPLMSEDELINIIDG 123
           AE++  +  L  +K  D DGN  ++G EL      + K  +GS    +   D     +  
Sbjct: 14  AELTASQF-LEIWKHFDADGNGYIEGKELENFFQELEKARKGSGM--MSKSDNFGEKMKE 70

Query: 124 VLRDDDKNNDGYIDYAEFAKSL 145
            ++  DKN+DG I+ AE A+ L
Sbjct: 71  FMQKYDKNSDGKIEMAELAQIL 92


>gi|6031162 calbindin 2 isoform 22k [Homo sapiens]
          Length = 192

 Score = 34.3 bits (77), Expect = 0.039
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 65  AEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHK-EEGSEQAPLMSEDELINIIDG 123
           AE++  +  L  +K  D DGN  ++G EL      + K  +GS    +   D     +  
Sbjct: 14  AELTASQF-LEIWKHFDADGNGYIEGKELENFFQELEKARKGSGM--MSKSDNFGEKMKE 70

Query: 124 VLRDDDKNNDGYIDYAEFAKSL 145
            ++  DKN+DG I+ AE A+ L
Sbjct: 71  FMQKYDKNSDGKIEMAELAQIL 92


>gi|58218968 calmodulin 3 [Homo sapiens]
          Length = 149

 Score = 34.3 bits (77), Expect = 0.039
 Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 13/92 (14%)

Query: 54  EHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMS 113
           E L  +  K +   S +E++   F++ D DGN  +   EL   +T++ ++   E+     
Sbjct: 68  EFLTMMARKMKDTDSEEEIR-EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE----- 121

Query: 114 EDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 145
                  +D ++R+ D + DG ++Y EF + +
Sbjct: 122 -------VDEMIREADIDGDGQVNYEEFVQMM 146


>gi|4885111 calmodulin-like 3 [Homo sapiens]
          Length = 149

 Score = 34.3 bits (77), Expect = 0.039
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 12/69 (17%)

Query: 77  FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYI 136
           F++ D DGN  +   EL   +T + ++   E+            +D ++R  D + DG +
Sbjct: 90  FRVFDKDGNGFVSAAELRHVMTRLGEKLSDEE------------VDEMIRAADTDGDGQV 137

Query: 137 DYAEFAKSL 145
           +Y EF + L
Sbjct: 138 NYEEFVRVL 146


>gi|4502549 calmodulin 2 [Homo sapiens]
          Length = 149

 Score = 34.3 bits (77), Expect = 0.039
 Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 13/92 (14%)

Query: 54  EHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMS 113
           E L  +  K +   S +E++   F++ D DGN  +   EL   +T++ ++   E+     
Sbjct: 68  EFLTMMARKMKDTDSEEEIR-EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE----- 121

Query: 114 EDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 145
                  +D ++R+ D + DG ++Y EF + +
Sbjct: 122 -------VDEMIREADIDGDGQVNYEEFVQMM 146


>gi|5901912 calmodulin 1 [Homo sapiens]
          Length = 149

 Score = 34.3 bits (77), Expect = 0.039
 Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 13/92 (14%)

Query: 54  EHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMS 113
           E L  +  K +   S +E++   F++ D DGN  +   EL   +T++ ++   E+     
Sbjct: 68  EFLTMMARKMKDTDSEEEIR-EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE----- 121

Query: 114 EDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 145
                  +D ++R+ D + DG ++Y EF + +
Sbjct: 122 -------VDEMIREADIDGDGQVNYEEFVQMM 146


>gi|21361559 visinin-like 1 [Homo sapiens]
          Length = 191

 Score = 33.9 bits (76), Expect = 0.050
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 77  FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELI--NIIDGVLRDDDKNNDG 134
           F M+D DG+  +  +E+   I  ++K  G+     M+ED L     +D +    DKN D 
Sbjct: 105 FNMYDLDGDGKITRVEMLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNKDD 164

Query: 135 YIDYAEFAKS 144
            I   EF ++
Sbjct: 165 QITLDEFKEA 174


>gi|78190478 Kv channel interacting protein 1 isoform 3 [Homo
           sapiens]
          Length = 225

 Score = 33.9 bits (76), Expect = 0.050
 Identities = 17/70 (24%), Positives = 33/70 (47%)

Query: 77  FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYI 136
           F ++D + +  ++  E+   +  ++   G    P++ ED     +D   +  DKN DG +
Sbjct: 140 FNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIV 199

Query: 137 DYAEFAKSLQ 146
              EF +S Q
Sbjct: 200 TLDEFLESCQ 209


>gi|78190480 Kv channel interacting protein 1 isoform 1 [Homo
           sapiens]
          Length = 227

 Score = 33.9 bits (76), Expect = 0.050
 Identities = 17/70 (24%), Positives = 33/70 (47%)

Query: 77  FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYI 136
           F ++D + +  ++  E+   +  ++   G    P++ ED     +D   +  DKN DG +
Sbjct: 142 FNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIV 201

Query: 137 DYAEFAKSLQ 146
              EF +S Q
Sbjct: 202 TLDEFLESCQ 211


>gi|7657247 Kv channel interacting protein 1 isoform 2 [Homo
           sapiens]
          Length = 216

 Score = 33.9 bits (76), Expect = 0.050
 Identities = 17/70 (24%), Positives = 33/70 (47%)

Query: 77  FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYI 136
           F ++D + +  ++  E+   +  ++   G    P++ ED     +D   +  DKN DG +
Sbjct: 131 FNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIV 190

Query: 137 DYAEFAKSLQ 146
              EF +S Q
Sbjct: 191 TLDEFLESCQ 200


>gi|20070228 nucleobindin 1 [Homo sapiens]
          Length = 461

 Score = 33.5 bits (75), Expect = 0.066
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 76  YFKMHDYDGNNLLDGLELSTAITH----VHKEEGSEQAPLMSEDELINIIDGVLRDDDKN 131
           +F +HD + + +LD  EL    T     V+  +  E      E+E + + + V+++ D N
Sbjct: 248 FFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTN 307

Query: 132 NDGYIDYAEFAKSLQ 146
            D  +   EF  S Q
Sbjct: 308 QDRLVTLEEFLASTQ 322


>gi|19913446 hippocalcin [Homo sapiens]
          Length = 193

 Score = 32.7 bits (73), Expect = 0.11
 Identities = 18/67 (26%), Positives = 28/67 (41%)

Query: 77  FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYI 136
           F M+D DGN  +   E+   +  ++K   S       E       + + R  D NNDG +
Sbjct: 105 FSMYDLDGNGYISREEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNNDGKL 164

Query: 137 DYAEFAK 143
              EF +
Sbjct: 165 SLEEFIR 171


>gi|7705419 hippocalcin-like protein 4 [Homo sapiens]
          Length = 191

 Score = 32.3 bits (72), Expect = 0.15
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)

Query: 77  FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELI--NIIDGVLRDDDKNNDG 134
           F+M+D DG+  +  LE+   I  ++K  G+     M++D L     +D + +  D++ D 
Sbjct: 105 FEMYDLDGDGRITRLEMLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKKMDQDKDD 164

Query: 135 YIDYAEFAKS 144
            I   EF ++
Sbjct: 165 QITLEEFKEA 174


>gi|32698688 citron [Homo sapiens]
          Length = 2027

 Score = 32.0 bits (71), Expect = 0.19
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 4/96 (4%)

Query: 35  QPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHY---FKMHDYDGNNLLDGL 91
           +  S G+ K  V  +E   +H E  ++    E+  ++ + HY    K+ D      L   
Sbjct: 680 EDSSEGIRKKLVEAEELEEKHREAQVSAQHLEVHLKQKEQHYEEKIKVLDNQIKKDLADK 739

Query: 92  ELSTAITHVHKEEGSEQAPLMSEDE-LINIIDGVLR 126
           E    +   H+EE  E+  ++SE + +IN +D  +R
Sbjct: 740 ETLENMMQRHEEEAHEKGKILSEQKAMINAMDSKIR 775


>gi|223278387 calmodulin-like 5 [Homo sapiens]
          Length = 146

 Score = 31.2 bits (69), Expect = 0.33
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 13/82 (15%)

Query: 64  EAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDG 123
           +A    ++LQ+  F+  D DG+  +   EL  A+  + +       PL  E+     +D 
Sbjct: 75  KARAGLEDLQVA-FRAFDQDGDGHITVDELRRAMAGLGQ-------PLPQEE-----LDA 121

Query: 124 VLRDDDKNNDGYIDYAEFAKSL 145
           ++R+ D + DG ++Y EFA+ L
Sbjct: 122 MIREADVDQDGRVNYEEFARML 143


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.134    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,124,287
Number of Sequences: 37866
Number of extensions: 269989
Number of successful extensions: 962
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 871
Number of HSP's gapped (non-prelim): 147
length of query: 146
length of database: 18,247,518
effective HSP length: 92
effective length of query: 54
effective length of database: 14,763,846
effective search space: 797247684
effective search space used: 797247684
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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