Guide to the Human Genome
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Name: GUCA1C Sequence: fasta or formatted (209aa) NCBI GI: 215983090
Description:

guanylate cyclase activator 1C

Referenced in:

Cyclic Nucleotides

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         10           2
 C cysteine            0.5          1           1
 D aspartate           8.1         17           1
 E glutamate           6.7         14           2
 F phenylalanine       6.2         13           1
 G glycine             7.2         15           1
 H histidine           1.9          4           1
 I isoleucine          5.3         11           1
 K lysine              9.6         20           1
 L leucine            10.0         21           2
 M methionine          4.8         10           2
 N asparagine          7.2         15           2
 P proline             2.4          5           1
 Q glutamine           6.2         13           2
 R arginine            1.0          2           1
 S serine              4.3          9           2
 T threonine           4.8         10           1
 V valine              5.3         11           1
 W tryptophan          1.0          2           1
 Y tyrosine            2.9          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanylate cyclase activator 1C 
GUCA1A                0.432   guanylate cyclase activator 1A (retina) 
GUCA1B                0.260   guanylate cyclase activator 1B (retina) 
HPCAL1                0.242   hippocalcin-like 1 
HPCAL1                0.242   hippocalcin-like 1 
NCALD                 0.237   neurocalcin delta 
NCALD                 0.237   neurocalcin delta 
NCALD                 0.237   neurocalcin delta 
NCALD                 0.237   neurocalcin delta 
NCALD                 0.237   neurocalcin delta 
NCALD                 0.237   neurocalcin delta 
NCALD                 0.237   neurocalcin delta 
NCALD                 0.237   neurocalcin delta 
HPCA                  0.235   hippocalcin 
HPCAL4                0.203   hippocalcin-like protein 4 
VSNL1                 0.198   visinin-like 1 
KCNIP2                0.195   Kv channel interacting protein 2 isoform 5 
KCNIP2                0.195   Kv channel interacting protein 2 isoform 6 
KCNIP2                0.195   Kv channel interacting protein 2 isoform 3 
KCNIP2                0.195   Kv channel interacting protein 2 isoform 1 
KCNIP2                0.195   Kv channel interacting protein 2 isoform 2 
FREQ                  0.188   frequenin homolog isoform 2 
FREQ                  0.188   frequenin homolog isoform 1 
RCVRN                 0.188   recoverin 
KCNIP2                0.180   Kv channel interacting protein 2 isoform 4 
KCNIP1                0.180   Kv channel interacting protein 1 isoform 3 
KCNIP1                0.180   Kv channel interacting protein 1 isoform 1 
KCNIP1                0.180   Kv channel interacting protein 1 isoform 2 
KCNIP4                0.177   Kv channel interacting protein 4 isoform 3 
KCNIP4                0.177   Kv channel interacting protein 4 isoform 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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