Guide to the Human Genome
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Name: ABRA Sequence: fasta or formatted (381aa) NCBI GI: 21040251
Description:

actin-binding Rho activating protein

Referenced in:

Muscle

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         23           1
 C cysteine            1.0          4           1
 D aspartate           5.5         21           2
 E glutamate           9.2         35           2
 F phenylalanine       1.8          7           1
 G glycine             8.4         32           2
 H histidine           3.4         13           1
 I isoleucine          4.2         16           2
 K lysine              7.3         28           3
 L leucine             5.8         22           2
 M methionine          2.4          9           2
 N asparagine          2.1          8           1
 P proline             6.3         24           2
 Q glutamine           5.8         22           2
 R arginine            8.4         32           3
 S serine              7.1         27           2
 T threonine           5.0         19           1
 V valine              6.0         23           2
 W tryptophan          2.1          8           1
 Y tyrosine            2.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   actin-binding Rho activating protein 
C6orf115              0.024   hypothetical protein LOC58527 
GLCCI1                0.021   glucocorticoid induced transcript 1 
CHD2                  0.021   chromodomain helicase DNA binding protein 2 isoform...
CHD2                  0.021   chromodomain helicase DNA binding protein 2 isoform...
NIPBL                 0.012   delangin isoform B 
NIPBL                 0.012   delangin isoform A 
SESN2                 0.012   sestrin 2 
CTAGE1                0.012   cutaneous T-cell lymphoma-associated antigen 1 isofo...
STK11IP               0.012   LKB1 interacting protein 
HOXD4                 0.011   homeobox D4 
CTAGE4                0.011   CTAGE family, member 4 
LOC643854             0.011   hypothetical protein LOC643854 
TCF20                 0.011   transcription factor 20 isoform 2 
TCF20                 0.011   transcription factor 20 isoform 1 
SRRM2                 0.011   splicing coactivator subunit SRm300 
RSL1D1                0.011   ribosomal L1 domain containing 1 
RAX                   0.009   retina and anterior neural fold homeobox 
BHLHE41               0.009   basic helix-loop-helix domain containing, class B, 3...
MON1B                 0.009   MON1 homolog B 
LOC100132339          0.009   PREDICTED: hypothetical protein 
LOC100132339          0.009   PREDICTED: hypothetical protein 
LOC100132339          0.009   PREDICTED: hypothetical protein 
TENC1                 0.009   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.009   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.009   tensin like C1 domain containing phosphatase isoform...
BAT2                  0.009   HLA-B associated transcript-2 
RBBP6                 0.009   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.009   retinoblastoma-binding protein 6 isoform 1 
KIAA1614              0.009   hypothetical protein LOC57710 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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