Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CDK6 Sequence: fasta or formatted (326aa) NCBI GI: 223718134
Description:

cyclin-dependent kinase 6

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt mRNA [326aa] cyclin-dependent kinase 6
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         19           1
 C cysteine            1.8          6           1
 D aspartate           7.1         23           1
 E glutamate           6.7         22           2
 F phenylalanine       4.9         16           1
 G glycine             5.5         18           2
 H histidine           2.8          9           1
 I isoleucine          3.7         12           1
 K lysine              5.5         18           1
 L leucine            12.0         39           3
 M methionine          1.8          6           2
 N asparagine          2.1          7           1
 P proline             5.2         17           2
 Q glutamine           4.3         14           2
 R arginine            6.7         22           2
 S serine              6.1         20           2
 T threonine           5.8         19           2
 V valine              8.6         28           3
 W tryptophan          0.9          3           1
 Y tyrosine            2.5          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin-dependent kinase 6 
CDK6                  1.000   cyclin-dependent kinase 6 
CDK4                  0.623   cyclin-dependent kinase 4 
CDK3                  0.391   cyclin-dependent kinase 3 
CDK2                  0.384   cyclin-dependent kinase 2 isoform 1 
CDC2                  0.370   cell division cycle 2 isoform 1 
CDC2                  0.367   cell division cycle 2 isoform 3 
CDK5                  0.339   cyclin-dependent kinase 5 
CDC2L1                0.323   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.323   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.323   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.323   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.323   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.323   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L2                0.318   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.318   cell division cycle 2-like 2 isoform 1 
PFTK1                 0.305   PFTAIRE protein kinase 1 
PCTK3                 0.294   PCTAIRE protein kinase 3 isoform a 
PCTK3                 0.294   PCTAIRE protein kinase 3 isoform b 
PCTK3                 0.294   PCTAIRE protein kinase 3 isoform b 
PCTK1                 0.291   PCTAIRE protein kinase 1 isoform 2 
PCTK1                 0.291   PCTAIRE protein kinase 1 isoform 1 
PCTK2                 0.291   PCTAIRE protein kinase 2 
CDK10                 0.288   cyclin-dependent kinase 10 isoform a 
PFTK2                 0.269   PFTAIRE protein kinase 2 
CRKRS                 0.267   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.267   Cdc2-related kinase, arginine/serine-rich isoform 1...
CDC2L5                0.264   cell division cycle 2-like 5 isoform 1 
CDC2L5                0.264   cell division cycle 2-like 5 isoform 2 
CCRK                  0.263   cell cycle related kinase isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press