Search of human proteins with 208609966

Search of human proteins with 208609966

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|208609966 RAB7, member RAS oncogene family-like 1 isoform 3
[Homo sapiens]
         (131 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|208609966 RAB7, member RAS oncogene family-like 1 isoform 3 [...   272   5e-74
gi|208609964 RAB7, member RAS oncogene family-like 1 isoform 2 [...   272   5e-74
gi|208609962 RAB7, member RAS oncogene family-like 1 isoform 1 [...   272   5e-74
gi|4506375 RAB7, member RAS oncogene family-like 1 isoform 1 [Ho...   272   5e-74
gi|5803133 RAB32, member RAS oncogene family [Homo sapiens]           119   7e-28
gi|11641237 RAB38 [Homo sapiens]                                      117   3e-27
gi|4759012 RAB9A, member RAS oncogene family [Homo sapiens]            69   1e-12
gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo sa...    61   3e-10
gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo sa...    61   3e-10
gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]           60   6e-10
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]            60   6e-10
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]       59   8e-10
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa...    58   2e-09
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]             58   2e-09
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]             58   2e-09
gi|7705963 RAB9B, member RAS oncogene family [Homo sapiens]            58   2e-09
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa...    57   4e-09
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa...    57   4e-09
gi|34147513 RAB7, member RAS oncogene family [Homo sapiens]            57   5e-09
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]          57   5e-09
gi|34485714 Ras-related protein Rab-23 [Homo sapiens]                  55   2e-08
gi|19923483 GTPase Rab14 [Homo sapiens]                                55   2e-08
gi|34485716 Ras-related protein Rab-23 [Homo sapiens]                  55   2e-08
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]           55   2e-08
gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]            54   3e-08
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap...    54   5e-08
gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]          54   5e-08
gi|50234889 RAB43 protein [Homo sapiens]                               54   5e-08
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]            53   8e-08
gi|254281345 RAB2B protein isoform 2 [Homo sapiens]                    52   1e-07

>gi|208609966 RAB7, member RAS oncogene family-like 1 isoform 3
           [Homo sapiens]
          Length = 131

 Score =  272 bits (696), Expect = 5e-74
 Identities = 131/131 (100%), Positives = 131/131 (100%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW 60
           MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW
Sbjct: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW 60

Query: 61  AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYIN 120
           AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYIN
Sbjct: 61  AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYIN 120

Query: 121 LQTKSSSWSCC 131
           LQTKSSSWSCC
Sbjct: 121 LQTKSSSWSCC 131


>gi|208609964 RAB7, member RAS oncogene family-like 1 isoform 2
           [Homo sapiens]
          Length = 179

 Score =  272 bits (696), Expect = 5e-74
 Identities = 131/131 (100%), Positives = 131/131 (100%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW 60
           MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW
Sbjct: 49  MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW 108

Query: 61  AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYIN 120
           AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYIN
Sbjct: 109 AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYIN 168

Query: 121 LQTKSSSWSCC 131
           LQTKSSSWSCC
Sbjct: 169 LQTKSSSWSCC 179


>gi|208609962 RAB7, member RAS oncogene family-like 1 isoform 1
           [Homo sapiens]
          Length = 203

 Score =  272 bits (696), Expect = 5e-74
 Identities = 131/131 (100%), Positives = 131/131 (100%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW 60
           MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW
Sbjct: 73  MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW 132

Query: 61  AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYIN 120
           AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYIN
Sbjct: 133 AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYIN 192

Query: 121 LQTKSSSWSCC 131
           LQTKSSSWSCC
Sbjct: 193 LQTKSSSWSCC 203


>gi|4506375 RAB7, member RAS oncogene family-like 1 isoform 1 [Homo
           sapiens]
          Length = 203

 Score =  272 bits (696), Expect = 5e-74
 Identities = 131/131 (100%), Positives = 131/131 (100%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW 60
           MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW
Sbjct: 73  MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW 132

Query: 61  AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYIN 120
           AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYIN
Sbjct: 133 AVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYIN 192

Query: 121 LQTKSSSWSCC 131
           LQTKSSSWSCC
Sbjct: 193 LQTKSSSWSCC 203


>gi|5803133 RAB32, member RAS oncogene family [Homo sapiens]
          Length = 225

 Score =  119 bits (298), Expect = 7e-28
 Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 10/138 (7%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLS-P 59
           MTR+YY++A    ++FD++ ++TF    +WK DLDSK+ LPNG P+P +LLANKCD +  
Sbjct: 91  MTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKD 150

Query: 60  WAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMM------RNSTEDIMSLS 113
            + S  Q+D+F KE+GF GW ETS K+N NI EA R L+EK++       N   D+  + 
Sbjct: 151 SSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSFPNEENDVDKIK 210

Query: 114 TQGDYINLQTKSSSWSCC 131
              + +  + KS    CC
Sbjct: 211 LDQETLRAENKS---QCC 225


>gi|11641237 RAB38 [Homo sapiens]
          Length = 211

 Score =  117 bits (293), Expect = 3e-27
 Identities = 62/133 (46%), Positives = 85/133 (63%), Gaps = 4/133 (3%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW 60
           MTR+YYR+A    I+FDVT   TF    +WK DLDSKL+LPNG+PV  +LLANKCD    
Sbjct: 75  MTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPVSVVLLANKCDQGKD 134

Query: 61  AVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDY 118
            +  +  ++D+F KE+GF GW ETS KEN NI+EA R L++ ++ N   D+M  S + D 
Sbjct: 135 VLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANEC-DLME-SIEPDV 192

Query: 119 INLQTKSSSWSCC 131
           +     S+  + C
Sbjct: 193 VKPHLTSTKVASC 205


>gi|4759012 RAB9A, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score = 68.6 bits (166), Expect = 1e-12
 Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 3/128 (2%)

Query: 5   YYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPWAVSR 64
           +YR +  C++ F V ++ +F N   WK++      +   E  P ++L NK D+S   VS 
Sbjct: 76  FYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDISERQVST 135

Query: 65  DQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYINLQTK 124
           ++   + ++NG   + ETS K+  N+  A    + +++  +TED      Q D +NL  K
Sbjct: 136 EEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL--ATEDRSDHLIQTDTVNLHRK 193

Query: 125 -SSSWSCC 131
              S SCC
Sbjct: 194 PKPSSSCC 201


>gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo
           sapiens]
          Length = 216

 Score = 60.8 bits (146), Expect = 3e-10
 Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 8/131 (6%)

Query: 4   LYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDL-SPWAV 62
           +YYR A A ++++D+TN  TF+ ++ W ++L  + + PN   +   L  NK DL S  AV
Sbjct: 89  MYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQAS-PN---IVIALAGNKADLASKRAV 144

Query: 63  SRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYINLQ 122
              +   ++ +N    + ETS K   N+NE    + +K+ +N  ++      +   ++LQ
Sbjct: 145 EFQEAQAYADDNSLL-FMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQ 203

Query: 123 --TKSSSWSCC 131
               +S   CC
Sbjct: 204 ENNPASRSQCC 214


>gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo
           sapiens]
          Length = 216

 Score = 60.8 bits (146), Expect = 3e-10
 Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 8/131 (6%)

Query: 4   LYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDL-SPWAV 62
           +YYR A A ++++D+TN  TF+ ++ W ++L  + + PN   +   L  NK DL S  AV
Sbjct: 89  MYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQAS-PN---IVIALAGNKADLASKRAV 144

Query: 63  SRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYINLQ 122
              +   ++ +N    + ETS K   N+NE    + +K+ +N  ++      +   ++LQ
Sbjct: 145 EFQEAQAYADDNSLL-FMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQ 203

Query: 123 --TKSSSWSCC 131
               +S   CC
Sbjct: 204 ENNPASRSQCC 214


>gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]
          Length = 215

 Score = 59.7 bits (143), Expect = 6e-10
 Identities = 36/131 (27%), Positives = 71/131 (54%), Gaps = 8/131 (6%)

Query: 4   LYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDL-SPWAV 62
           +YYR A A ++++D+TN  +F+ ++ W ++L  + + PN   +   L  NK DL +  AV
Sbjct: 88  MYYRGAQAAIVVYDITNEESFARAKNWVKELQRQAS-PN---IVIALSGNKADLANKRAV 143

Query: 63  SRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYINL- 121
              +   ++ +N    + ETS K + N+NE    + +K+ +N  ++  + S +G  ++L 
Sbjct: 144 DFQEAQSYADDNSLL-FMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLT 202

Query: 122 -QTKSSSWSCC 131
             T+ +   CC
Sbjct: 203 EPTQPTRNQCC 213


>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score = 59.7 bits (143), Expect = 6e-10
 Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 6/106 (5%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDL-SP 59
           +T  YYR A   ++++D+T+  +F N Q W + +    +      V  LLL NKCD+ + 
Sbjct: 73  ITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AGVERLLLGNKCDMEAK 128

Query: 60  WAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNS 105
             V ++Q D+ ++E+G   + ETS K + N++EA   L   ++  S
Sbjct: 129 RKVQKEQADKLAREHGIR-FFETSAKSSMNVDEAFSSLARDILLKS 173


>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
          Length = 200

 Score = 59.3 bits (142), Expect = 8e-10
 Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 6/106 (5%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDL-SP 59
           +T  YYR A   ++++D+TN  +F N  +W +++D        E V  +LL NKCD+   
Sbjct: 74  ITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHA----NEDVERMLLGNKCDMDDK 129

Query: 60  WAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNS 105
             V + +  + ++E+G   + ETS K N NI +A   L E ++R +
Sbjct: 130 RVVPKGKGGQIAREHGIR-FFETSAKANINIEKAFLTLAEDILRKT 174


>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
           family [Homo sapiens]
          Length = 327

 Score = 58.2 bits (139), Expect = 2e-09
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 6/106 (5%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDL-SP 59
           +T  YYR A   ++ +D+T+  +F N Q W + +    +      V  LLL NKCD+ + 
Sbjct: 197 ITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENAS----AGVEHLLLGNKCDMEAK 252

Query: 60  WAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNS 105
             V ++Q D+ ++E+G   + ETS K + N++EA   L   ++  S
Sbjct: 253 RKVQKEQADKLAREHGIR-FFETSAKSSMNVDEAFSSLARDILLKS 297


>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score = 58.2 bits (139), Expect = 2e-09
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 6/106 (5%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDL-SP 59
           +T  YYR A   ++ +D+T+  +F N Q W + +    +      V  LLL NKCD+ + 
Sbjct: 197 ITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENAS----AGVEHLLLGNKCDMEAK 252

Query: 60  WAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNS 105
             V ++Q D+ ++E+G   + ETS K + N++EA   L   ++  S
Sbjct: 253 RKVQKEQADKLAREHGIR-FFETSAKSSMNVDEAFSSLARDILLKS 297


>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score = 58.2 bits (139), Expect = 2e-09
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 6/106 (5%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDL-SP 59
           +T  YYR A   ++ +D+T+  +F N Q W + +    +      V  LLL NKCD+ + 
Sbjct: 197 ITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENAS----AGVEHLLLGNKCDMEAK 252

Query: 60  WAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNS 105
             V ++Q D+ ++E+G   + ETS K + N++EA   L   ++  S
Sbjct: 253 RKVQKEQADKLAREHGIR-FFETSAKSSMNVDEAFSSLARDILLKS 297


>gi|7705963 RAB9B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 2/127 (1%)

Query: 5   YYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPWAVSR 64
           +YR A  C++ F V +  +F N   W+++      + + E  P ++L NK D     V+ 
Sbjct: 76  FYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVDKEDRQVTT 135

Query: 65  DQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYINLQTK 124
           ++   +  ENG   + ETS K++ N+  A    + +++  + E+ +     G  I+L + 
Sbjct: 136 EEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVL--AVEEQLEHCMLGHTIDLNSG 193

Query: 125 SSSWSCC 131
           S + S C
Sbjct: 194 SKAGSSC 200


>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
           sapiens]
          Length = 223

 Score = 57.0 bits (136), Expect = 4e-09
 Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW 60
           +T  YYRDA A ++++D+TN ++F N + W  ++           V  +LL NK D+S  
Sbjct: 95  VTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQ----RDVVIMLLGNKADMSSE 150

Query: 61  AVSRDQI-DRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQ-GDY 118
            V R +  +  ++E G   + ETS K   N+  A   + +++   +       S Q  DY
Sbjct: 151 RVIRSEDGETLAREYG-VPFLETSAKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRDY 209

Query: 119 INLQTKSSSWSCC 131
           +  Q K S  SCC
Sbjct: 210 VESQKKRS--SCC 220


>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
           sapiens]
          Length = 216

 Score = 57.0 bits (136), Expect = 4e-09
 Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW 60
           +T  YYRDA A ++++D+TN ++F N + W  ++           V  +LL NK D+S  
Sbjct: 88  VTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQ----RDVVIMLLGNKADMSSE 143

Query: 61  AVSRDQI-DRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQ-GDY 118
            V R +  +  ++E G   + ETS K   N+  A   + +++   +       S Q  DY
Sbjct: 144 RVIRSEDGETLAREYG-VPFLETSAKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRDY 202

Query: 119 INLQTKSSSWSCC 131
           +  Q K S  SCC
Sbjct: 203 VESQKKRS--SCC 213


>gi|34147513 RAB7, member RAS oncogene family [Homo sapiens]
          Length = 207

 Score = 56.6 bits (135), Expect = 5e-09
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 4/105 (3%)

Query: 5   YYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLS--PWAV 62
           +YR A  CV++FDVT   TF     W+ +   + +  + E  P ++L NK DL     A 
Sbjct: 77  FYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVAT 136

Query: 63  SRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTE 107
            R Q   +SK N    + ETS KE  N+ +A + +    ++  TE
Sbjct: 137 KRAQAWCYSKNN--IPYFETSAKEAINVEQAFQTIARNALKQETE 179


>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
          Length = 244

 Score = 56.6 bits (135), Expect = 5e-09
 Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDL-SP 59
           +T  YYR A   ++++D+T   TF +  +W + +D   +    E    LL+ NK D  + 
Sbjct: 107 ITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYAS----EDAELLLVGNKLDCETD 162

Query: 60  WAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYI 119
             ++R Q ++F+++     + E S K+N N++E    L++ +++    DI+        +
Sbjct: 163 REITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRNELSNSIL 222

Query: 120 NLQ 122
           +LQ
Sbjct: 223 SLQ 225


>gi|34485714 Ras-related protein Rab-23 [Homo sapiens]
          Length = 237

 Score = 55.1 bits (131), Expect = 2e-08
 Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 7/110 (6%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCD-LSP 59
           +T+ YYR A ACV++F  T+  +F     W++    K+    G+ +P +L+ NK D L  
Sbjct: 74  ITKAYYRGAQACVLVFSTTDRESFEAVSSWRE----KVVAEVGD-IPTVLVQNKIDLLDD 128

Query: 60  WAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDI 109
             +  ++ +  +K      +  TSVKE+ N+NE  + L EK ++   + I
Sbjct: 129 SCIKNEEAEALAKRLKLR-FYRTSVKEDLNVNEVFKYLAEKYLQKLKQQI 177


>gi|19923483 GTPase Rab14 [Homo sapiens]
          Length = 215

 Score = 55.1 bits (131), Expect = 2e-08
 Identities = 33/114 (28%), Positives = 62/114 (54%), Gaps = 6/114 (5%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW 60
           +TR YYR A+  ++++D+T  +T+++   W  D    LT PN      +L+ NK DL   
Sbjct: 76  VTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDA-RNLTNPN---TVIILIGNKADLEAQ 131

Query: 61  A-VSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLS 113
             V+ ++  +F++ENG   + E S K  +N+ +A     +K+ +N  +  + L+
Sbjct: 132 RDVTYEEAKQFAEENGLL-FLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLN 184


>gi|34485716 Ras-related protein Rab-23 [Homo sapiens]
          Length = 237

 Score = 55.1 bits (131), Expect = 2e-08
 Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 7/110 (6%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCD-LSP 59
           +T+ YYR A ACV++F  T+  +F     W++    K+    G+ +P +L+ NK D L  
Sbjct: 74  ITKAYYRGAQACVLVFSTTDRESFEAVSSWRE----KVVAEVGD-IPTVLVQNKIDLLDD 128

Query: 60  WAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDI 109
             +  ++ +  +K      +  TSVKE+ N+NE  + L EK ++   + I
Sbjct: 129 SCIKNEEAEALAKRLKLR-FYRTSVKEDLNVNEVFKYLAEKYLQKLKQQI 177


>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
          Length = 256

 Score = 54.7 bits (130), Expect = 2e-08
 Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 9/133 (6%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLS-P 59
           +T  YYRDA A ++++DVTN  +F N Q W  ++           V  +LL NK D +  
Sbjct: 129 VTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQ----HDVALMLLGNKVDSAHE 184

Query: 60  WAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQ-GDY 118
             V R+  ++ +KE G   + ETS K   N++ A   + +++ + S +       +  DY
Sbjct: 185 RVVKREDGEKLAKEYGLP-FMETSAKTGLNVDLAFTAIAKELKQRSMKAPSEPRFRLHDY 243

Query: 119 INLQTKSSSWSCC 131
           +  + + +  SCC
Sbjct: 244 VKREGRGA--SCC 254


>gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]
          Length = 215

 Score = 54.3 bits (129), Expect = 3e-08
 Identities = 30/131 (22%), Positives = 69/131 (52%), Gaps = 8/131 (6%)

Query: 4   LYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDL-SPWAV 62
           +YYR A A ++++D+TN  TF+ ++ W ++L  + +      +   L  NK DL +   V
Sbjct: 88  MYYRGAQAAIVVYDITNQETFARAKTWVKELQRQAS----PSIVIALAGNKADLANKRMV 143

Query: 63  SRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLS--TQGDYIN 120
             ++   ++ +N    + ETS K   N+N+    + +K+ ++  +++   +  ++G  ++
Sbjct: 144 EYEEAQAYADDNSLL-FMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDLH 202

Query: 121 LQTKSSSWSCC 131
            Q++ +   CC
Sbjct: 203 EQSQQNKSQCC 213


>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
           sapiens]
          Length = 205

 Score = 53.5 bits (127), Expect = 5e-08
 Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDL-SP 59
           +T  YYR A   ++++DVT+  +F+N ++W Q++D   +    E V  LL+ NKCDL + 
Sbjct: 76  ITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAS----ENVNKLLVGNKCDLTTK 131

Query: 60  WAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYI 119
             V       F+   G   + ETS K   N+ ++   +  ++ +       +   +   +
Sbjct: 132 KVVDYTTAKEFADSLGIP-FLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNV 190

Query: 120 NLQT---KSSSWSCC 131
            +Q+   K S   CC
Sbjct: 191 KIQSTPVKQSGGGCC 205


>gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
          Length = 217

 Score = 53.5 bits (127), Expect = 5e-08
 Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 10/109 (9%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW 60
           +T+ YYR A A +I +D+T  +TF +   W  +++          V  +L+ NKCDL  W
Sbjct: 82  ITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKY----GAANVVIMLIGNKCDL--W 135

Query: 61  A---VSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMM-RNS 105
               V  +     +++ G     ETS KE+KNI E   ++ ++++ RNS
Sbjct: 136 EKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNS 184


>gi|50234889 RAB43 protein [Homo sapiens]
          Length = 212

 Score = 53.5 bits (127), Expect = 5e-08
 Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW 60
           +T+ YYR A+  ++ +D+T  ++F +   W +D+        G  +  LL+ NK DLS  
Sbjct: 83  ITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYA----GSNIVQLLIGNKSDLSEL 138

Query: 61  -AVSRDQIDRFSKENGFTGWTETSVKENKNINEA-MRVLIEKMMRNSTEDIMSLSTQGDY 118
             VS  +    ++        ETS K++ N+ EA +RV  E +MR+        S     
Sbjct: 139 REVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHGGPLFSEKSPDHIQ 198

Query: 119 INLQTKSSSWSC 130
           +N +     W C
Sbjct: 199 LNSKDIGEGWGC 210


>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
          Length = 212

 Score = 52.8 bits (125), Expect = 8e-08
 Identities = 31/122 (25%), Positives = 63/122 (51%), Gaps = 6/122 (4%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDL-SP 59
           +TR YYR A+  ++++D+T   TF++   W +D        +   +  +L+ NK DL S 
Sbjct: 71  ITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQH----SNSNMVIMLIGNKSDLESR 126

Query: 60  WAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYI 119
             V +++ + F++E+G   + ETS K   N+ EA     +++     E +  ++ + + I
Sbjct: 127 REVKKEEGEAFAREHGLI-FMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGI 185

Query: 120 NL 121
            +
Sbjct: 186 KI 187


>gi|254281345 RAB2B protein isoform 2 [Homo sapiens]
          Length = 170

 Score = 52.4 bits (124), Expect = 1e-07
 Identities = 33/127 (25%), Positives = 65/127 (51%), Gaps = 6/127 (4%)

Query: 1   MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDL-SP 59
           +TR YYR A+  ++++D+T   TF++   W +D        +   +  +L+ NK DL S 
Sbjct: 25  ITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH----SSSNMVIMLIGNKSDLESR 80

Query: 60  WAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTEDIMSLSTQGDYI 119
             V R++ + F++E+G   + ETS K   N+ EA     +++ R   + +  +  + + I
Sbjct: 81  RDVKREEGEAFAREHGLI-FMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGI 139

Query: 120 NLQTKSS 126
            +  + S
Sbjct: 140 KIGPQQS 146


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.127    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,538,117
Number of Sequences: 37866
Number of extensions: 171837
Number of successful extensions: 509
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 375
Number of HSP's gapped (non-prelim): 135
length of query: 131
length of database: 18,247,518
effective HSP length: 91
effective length of query: 40
effective length of database: 14,801,712
effective search space: 592068480
effective search space used: 592068480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.