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Search of human proteins with 207113133
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|207113133 hypothetical protein LOC729085 [Homo sapiens]
(575 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|207113133 hypothetical protein LOC729085 [Homo sapiens] 1185 0.0
gi|190358493 hypothetical protein LOC51313 isoform 2 [Homo sapiens] 244 1e-64
gi|32526911 hypothetical protein LOC51313 isoform 2 [Homo sapiens] 244 1e-64
gi|190358490 hypothetical protein LOC51313 isoform 1 [Homo sapiens] 227 3e-59
gi|29570782 additional sex combs like 1 [Homo sapiens] 35 0.14
gi|56790919 haspin [Homo sapiens] 35 0.24
gi|31317301 nitric oxide synthase 1 (neuronal) adaptor protein i... 32 1.2
gi|18765711 four jointed box 1 [Homo sapiens] 32 1.6
gi|160948599 integrator complex subunit 1 [Homo sapiens] 32 1.6
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 32 2.1
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 32 2.1
gi|93102361 palladin [Homo sapiens] 32 2.1
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 32 2.1
gi|70608109 integrator complex subunit 8 [Homo sapiens] 32 2.1
gi|223633935 hypothetical protein LOC254427 [Homo sapiens] 31 2.7
gi|239753106 PREDICTED: similar to hCG1817845 [Homo sapiens] 31 2.7
gi|145309324 FH2 domain containing 1 [Homo sapiens] 31 2.7
gi|13787217 FAT tumor suppressor 2 precursor [Homo sapiens] 31 2.7
gi|239757331 PREDICTED: hypothetical protein [Homo sapiens] 31 3.5
gi|239751841 PREDICTED: hypothetical protein [Homo sapiens] 31 3.5
gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo ... 31 3.5
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 31 3.5
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 30 4.6
gi|239754483 PREDICTED: similar to FLJ00049 protein [Homo sapiens] 30 4.6
gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens] 30 4.6
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 30 6.0
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 30 6.0
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 30 6.0
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 30 6.0
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 30 6.0
>gi|207113133 hypothetical protein LOC729085 [Homo sapiens]
Length = 575
Score = 1185 bits (3066), Expect = 0.0
Identities = 575/575 (100%), Positives = 575/575 (100%)
Query: 1 MASWLRRKLRGKRRPVIAFCLLMILSAMAVTRFPPQRPSAGPDPGPMEPQGVTGAPATHI 60
MASWLRRKLRGKRRPVIAFCLLMILSAMAVTRFPPQRPSAGPDPGPMEPQGVTGAPATHI
Sbjct: 1 MASWLRRKLRGKRRPVIAFCLLMILSAMAVTRFPPQRPSAGPDPGPMEPQGVTGAPATHI 60
Query: 61 RQALSSSRRQRARNMGFWRSRALPRNSILVCAEEQGHRARVDRSRESPGGDLRHPGRVRR 120
RQALSSSRRQRARNMGFWRSRALPRNSILVCAEEQGHRARVDRSRESPGGDLRHPGRVRR
Sbjct: 61 RQALSSSRRQRARNMGFWRSRALPRNSILVCAEEQGHRARVDRSRESPGGDLRHPGRVRR 120
Query: 121 DITLSGHPRLSTQHVVLLREDEVGDPGTKDLGHPQHGSPIQETQSEVVTLVSPLPGSDMA 180
DITLSGHPRLSTQHVVLLREDEVGDPGTKDLGHPQHGSPIQETQSEVVTLVSPLPGSDMA
Sbjct: 121 DITLSGHPRLSTQHVVLLREDEVGDPGTKDLGHPQHGSPIQETQSEVVTLVSPLPGSDMA 180
Query: 181 ALPAWRATSGLTLWPHTAEGRDLLGAENRALTGGQQAEDPTLASGAHQWPGSVEKLQGSV 240
ALPAWRATSGLTLWPHTAEGRDLLGAENRALTGGQQAEDPTLASGAHQWPGSVEKLQGSV
Sbjct: 181 ALPAWRATSGLTLWPHTAEGRDLLGAENRALTGGQQAEDPTLASGAHQWPGSVEKLQGSV 240
Query: 241 WCDAETLLSSSRTGGQAPPWLTDHDVQMLRLLAQGEVVDKARVPAHGQVLQVGFSTEAAL 300
WCDAETLLSSSRTGGQAPPWLTDHDVQMLRLLAQGEVVDKARVPAHGQVLQVGFSTEAAL
Sbjct: 241 WCDAETLLSSSRTGGQAPPWLTDHDVQMLRLLAQGEVVDKARVPAHGQVLQVGFSTEAAL 300
Query: 301 QDLSSPRLSQLCSQGLCGLIKRPGDLPEVLSFHVDRVLGLRRSLPAVARRFHSPLLPYRY 360
QDLSSPRLSQLCSQGLCGLIKRPGDLPEVLSFHVDRVLGLRRSLPAVARRFHSPLLPYRY
Sbjct: 301 QDLSSPRLSQLCSQGLCGLIKRPGDLPEVLSFHVDRVLGLRRSLPAVARRFHSPLLPYRY 360
Query: 361 TDGGARPVIWWAPDVQHLSDPDEDQNSLALGWLQYQALLAHSCNWPGQAPCPGIHHTEWA 420
TDGGARPVIWWAPDVQHLSDPDEDQNSLALGWLQYQALLAHSCNWPGQAPCPGIHHTEWA
Sbjct: 361 TDGGARPVIWWAPDVQHLSDPDEDQNSLALGWLQYQALLAHSCNWPGQAPCPGIHHTEWA 420
Query: 421 RLALFDFLLQVHDRLDRYCCGFEPEPSDPCVEERLREKCQNPAELRLVHILVRSSDPSHL 480
RLALFDFLLQVHDRLDRYCCGFEPEPSDPCVEERLREKCQNPAELRLVHILVRSSDPSHL
Sbjct: 421 RLALFDFLLQVHDRLDRYCCGFEPEPSDPCVEERLREKCQNPAELRLVHILVRSSDPSHL 480
Query: 481 VYIDNAGNLQHPEDKLNFRLLEGIDGFPESAVKVLASGCLQNMLLKSLQMDPVFWESQGG 540
VYIDNAGNLQHPEDKLNFRLLEGIDGFPESAVKVLASGCLQNMLLKSLQMDPVFWESQGG
Sbjct: 481 VYIDNAGNLQHPEDKLNFRLLEGIDGFPESAVKVLASGCLQNMLLKSLQMDPVFWESQGG 540
Query: 541 AQGLKQVLQTLEQRGQVLLGHIQKHNLTLFRDEDP 575
AQGLKQVLQTLEQRGQVLLGHIQKHNLTLFRDEDP
Sbjct: 541 AQGLKQVLQTLEQRGQVLLGHIQKHNLTLFRDEDP 575
>gi|190358493 hypothetical protein LOC51313 isoform 2 [Homo sapiens]
Length = 519
Score = 244 bits (624), Expect = 1e-64
Identities = 130/316 (41%), Positives = 180/316 (56%), Gaps = 20/316 (6%)
Query: 257 APPWLTDHDVQMLRLLAQGEVVDKARVPAHGQVLQVGFSTEAALQDLSSPRLSQLCSQGL 316
AP WL+ D++ +RLLA V V + + + +P C
Sbjct: 212 APSWLSKDDIRRMRLLADSAVAGLRPVSSRS-------GARLLVLEGGAPGAVLRCGPSP 264
Query: 317 CGLIKRPGDLPEVLSFHVDRVLGLRRSLPAVARRFHSPLLPYRYTDGGARPVIWWAPDVQ 376
CGL+K+P D+ EV +FH+DR+LGL R+LP+V+R+ DG P+I W D
Sbjct: 265 CGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAEF------IQDGRPCPIILW--DAS 316
Query: 377 HLSDPDEDQNSLALGWLQYQALLAHSCNWPGQAP-----CPGIHHTEWARLALFDFLLQV 431
S ++ +S+ L W YQ LL C G+ P C IHH EW+++ALFDFLLQ+
Sbjct: 317 LSSASNDTHSSVKLTWGTYQQLLKQKCWQNGRVPKPESGCTEIHHHEWSKMALFDFLLQI 376
Query: 432 HDRLDRYCCGFEPEPSDPCVEERLREKCQNPAELRLVHILVRSSDPSHLVYIDNAGNLQH 491
++RLD CCGF P D CV+ LR KC + L HI+ R DP HLV+IDN G
Sbjct: 377 YNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAALAHIIQRKHDPRHLVFIDNKGFFDR 436
Query: 492 PEDKLNFRLLEGIDGFPESAVKVLASGCLQNMLLKSLQMDPVFWESQGGAQGLKQVLQTL 551
ED LNF+LLEGI FP SAV VL S L+ LL+SL +D V+WESQGG QG+++++ +
Sbjct: 437 SEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQSLFLDKVYWESQGGRQGIEKLIDVI 496
Query: 552 EQRGQVLLGHIQKHNL 567
E R ++L+ +I H +
Sbjct: 497 EHRAKILITYINAHGV 512
>gi|32526911 hypothetical protein LOC51313 isoform 2 [Homo sapiens]
Length = 519
Score = 244 bits (624), Expect = 1e-64
Identities = 130/316 (41%), Positives = 180/316 (56%), Gaps = 20/316 (6%)
Query: 257 APPWLTDHDVQMLRLLAQGEVVDKARVPAHGQVLQVGFSTEAALQDLSSPRLSQLCSQGL 316
AP WL+ D++ +RLLA V V + + + +P C
Sbjct: 212 APSWLSKDDIRRMRLLADSAVAGLRPVSSRS-------GARLLVLEGGAPGAVLRCGPSP 264
Query: 317 CGLIKRPGDLPEVLSFHVDRVLGLRRSLPAVARRFHSPLLPYRYTDGGARPVIWWAPDVQ 376
CGL+K+P D+ EV +FH+DR+LGL R+LP+V+R+ DG P+I W D
Sbjct: 265 CGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAEF------IQDGRPCPIILW--DAS 316
Query: 377 HLSDPDEDQNSLALGWLQYQALLAHSCNWPGQAP-----CPGIHHTEWARLALFDFLLQV 431
S ++ +S+ L W YQ LL C G+ P C IHH EW+++ALFDFLLQ+
Sbjct: 317 LSSASNDTHSSVKLTWGTYQQLLKQKCWQNGRVPKPESGCTEIHHHEWSKMALFDFLLQI 376
Query: 432 HDRLDRYCCGFEPEPSDPCVEERLREKCQNPAELRLVHILVRSSDPSHLVYIDNAGNLQH 491
++RLD CCGF P D CV+ LR KC + L HI+ R DP HLV+IDN G
Sbjct: 377 YNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAALAHIIQRKHDPRHLVFIDNKGFFDR 436
Query: 492 PEDKLNFRLLEGIDGFPESAVKVLASGCLQNMLLKSLQMDPVFWESQGGAQGLKQVLQTL 551
ED LNF+LLEGI FP SAV VL S L+ LL+SL +D V+WESQGG QG+++++ +
Sbjct: 437 SEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQSLFLDKVYWESQGGRQGIEKLIDVI 496
Query: 552 EQRGQVLLGHIQKHNL 567
E R ++L+ +I H +
Sbjct: 497 EHRAKILITYINAHGV 512
>gi|190358490 hypothetical protein LOC51313 isoform 1 [Homo sapiens]
Length = 527
Score = 227 bits (578), Expect = 3e-59
Identities = 126/317 (39%), Positives = 176/317 (55%), Gaps = 14/317 (4%)
Query: 257 APPWLTDHDVQMLRLLAQGEVVDKARVPAHGQVLQVGFSTEAALQDLSSPRLSQLCSQGL 316
AP WL+ D++ +RLLA V V + + + +P C
Sbjct: 212 APSWLSKDDIRRMRLLADSAVAGLRPVSSRS-------GARLLVLEGGAPGAVLRCGPSP 264
Query: 317 CGLIKRPGDLPEVLSFHVDRVLGLRRSLPAVARRFHSPLLPYRYTDGGARPVIWWAPDVQ 376
CGL+K+P D+ EV +FH+DR+LGL R+LP+V+R+ + R + P +
Sbjct: 265 CGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAEF-IQAAAAACLSMRLAFFIFPAWE 323
Query: 377 HLSDPDEDQNSLA-LGWLQYQALLAHSCNWPGQAP-----CPGIHHTEWARLALFDFLLQ 430
+ P + A L W YQ LL C G+ P C IHH EW+++ALFDFLLQ
Sbjct: 324 DMRVPGKCCIGHARLTWGTYQQLLKQKCWQNGRVPKPESGCTEIHHHEWSKMALFDFLLQ 383
Query: 431 VHDRLDRYCCGFEPEPSDPCVEERLREKCQNPAELRLVHILVRSSDPSHLVYIDNAGNLQ 490
+++RLD CCGF P D CV+ LR KC + L HI+ R DP HLV+IDN G
Sbjct: 384 IYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAALAHIIQRKHDPRHLVFIDNKGFFD 443
Query: 491 HPEDKLNFRLLEGIDGFPESAVKVLASGCLQNMLLKSLQMDPVFWESQGGAQGLKQVLQT 550
ED LNF+LLEGI FP SAV VL S L+ LL+SL +D V+WESQGG QG+++++
Sbjct: 444 RSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQSLFLDKVYWESQGGRQGIEKLIDV 503
Query: 551 LEQRGQVLLGHIQKHNL 567
+E R ++L+ +I H +
Sbjct: 504 IEHRAKILITYINAHGV 520
>gi|29570782 additional sex combs like 1 [Homo sapiens]
Length = 1541
Score = 35.4 bits (80), Expect = 0.14
Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 10/150 (6%)
Query: 115 PGRVRRDITLSGHPRLSTQHVVLLREDEVGDPGTKDLGHPQHGSPIQETQSEVVTLVSPL 174
PG+ D+T S PR S+ +V+ ++ G G + + + TL P
Sbjct: 1259 PGKSPGDLTTSRTPRFSSPNVISFGPEQTGRALGDQSNVTGQGKKLFGSGNVAATLQRPR 1318
Query: 175 PGSDMAALPAWRATSGLTLWPHTAEGRDLLGAENRALTGGQQAEDPTLASGAHQWPGSVE 234
P +D LPA + P G+ LG +++GG Q A H + GSV+
Sbjct: 1319 P-ADPMPLPA-------EIPPVFPSGK--LGPSTNSMSGGVQTPREDWAPKPHAFVGSVK 1368
Query: 235 KLQGSVWCDAETLLSSSRTGGQAPPWLTDH 264
+ V + + + G +P L H
Sbjct: 1369 NEKTFVGGPLKANAENRKATGHSPLELVGH 1398
>gi|56790919 haspin [Homo sapiens]
Length = 798
Score = 34.7 bits (78), Expect = 0.24
Identities = 41/144 (28%), Positives = 53/144 (36%), Gaps = 25/144 (17%)
Query: 38 PSAGPDPGPMEPQGVTGAPATHIRQA----LSSSRRQRARNMGFWRSRALPRNSILVCAE 93
PS DP + G+P R+ + R W+ RA P S+ V
Sbjct: 57 PSQSDDPDDPDDPDFPGSPVRRRRRRPGGRVPKDRPSLTVTPKRWKLRARP--SLTVTPR 114
Query: 94 EQGHRARVDRSRESPGGDLRHPGRVRRDITLSGHPRLSTQHVVLLREDEVGDPGTKDLGH 153
G RAR + +P G LR P RD SG RLS P G
Sbjct: 115 RLGLRARPPQKCSTPCGPLRLPPFPSRD---SG--RLS--------------PDLSVCGQ 155
Query: 154 PQHGSPIQETQSEVVTLVSPLPGS 177
P+ G + + S +L SP PGS
Sbjct: 156 PRDGDELGISASLFSSLASPCPGS 179
>gi|31317301 nitric oxide synthase 1 (neuronal) adaptor protein
isoform 1 [Homo sapiens]
Length = 506
Score = 32.3 bits (72), Expect = 1.2
Identities = 43/174 (24%), Positives = 70/174 (40%), Gaps = 31/174 (17%)
Query: 144 GDPGTKDLGHPQHGSPIQETQSEVVTLVSPLPGSDMAALPAWRATSGLTLWPHTAEGRDL 203
GDPG + L + S ++++ + PLPG+D+ + G+T D
Sbjct: 196 GDPG-RQLTGAERASTATAEETDIDAVEVPLPGNDVLEF-----SRGVT-------DLDA 242
Query: 204 LGAENRALTGGQQA--EDPTL-ASGAHQWPGSVEKLQGSVWCDAETLLSSSRTGGQAPPW 260
+G E + TG + + ++P L AS P S K G G P
Sbjct: 243 VGKEGGSHTGSKVSHPQEPMLTASPRMLLPSSSSKPPGL---------------GTETPL 287
Query: 261 LTDHDVQMLRLLAQGEVVDKARVPAHGQVLQVGFSTEAALQDLSSPRLSQLCSQ 314
T H +Q+L+ L Q + A +L+ + EAA + + R+ QL Q
Sbjct: 288 STHHQMQLLQQLLQQQQQQTQVAVAQVHLLKDQLAAEAAARLEAQARVHQLLLQ 341
>gi|18765711 four jointed box 1 [Homo sapiens]
Length = 437
Score = 32.0 bits (71), Expect = 1.6
Identities = 57/248 (22%), Positives = 92/248 (37%), Gaps = 50/248 (20%)
Query: 328 EVLSFHVDRVLGLRRSLPAVA-----------RRFHSPLLPYRYTDGGARPVIWWAPDVQ 376
E LS+++ R+LGL+R +P +A + L +T+G + W P++
Sbjct: 191 EALSYYLARLLGLQRHVPPLALARVEARGAQWAQVQEELRAAHWTEGSVVSLTRWLPNLT 250
Query: 377 HLSDPDEDQNSLALGWLQYQALLAHSCNWPGQ----APCPGIHHTEWARLALFDFLLQVH 432
+ P W L + G+ + + +W L LFD+L
Sbjct: 251 DVVVP--------APWRSEDGRLRPLRDAGGELANLSQAELVDLVQWTDLILFDYLTANF 302
Query: 433 DRLDRYCCGFEPEPSDPCVEERLREKCQNPAELRLVHILVRSSDPSHLVYIDNAGNLQHP 492
DRL + DP V +R + LV++DN L H
Sbjct: 303 DRLVSNLFSLQ---WDPRVMQRATSN-------------LHRGPGGALVFLDNEAGLVHG 346
Query: 493 E------DKLNFRLLEGIDGFPE-SAVKVLASGCLQNMLLKSLQM----DPVFWESQGGA 541
DK N LL+ + F E +A +VL Q+ + L++ +P F E A
Sbjct: 347 YRVAGMWDKYNEPLLQSVCVFRERTARRVLELHRGQDAAARLLRLYRRHEPRFPELAALA 406
Query: 542 QGLKQVLQ 549
Q+LQ
Sbjct: 407 DPHAQLLQ 414
>gi|160948599 integrator complex subunit 1 [Homo sapiens]
Length = 2190
Score = 32.0 bits (71), Expect = 1.6
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 7/101 (6%)
Query: 465 LRLVHILVRSSDPSHLVYIDNAGNLQHPEDKLNFRLLEGIDGFPESAVKVLASGCLQNML 524
LRL H+L RS +P L++I +Q + L + E ++ VL CL L
Sbjct: 860 LRLGHLLCRSRNPDFLLHI-----IQRQASSQSMPWLADLVQSSEGSLDVLPVQCLCEFL 914
Query: 525 LKSLQMDPVFWE--SQGGAQGLKQVLQTLEQRGQVLLGHIQ 563
L D E +G ++ K + +Q+ + LLG +Q
Sbjct: 915 LHDAVDDAASGEEDDEGESKEQKAKKRQRQQKQRQLLGRLQ 955
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 31.6 bits (70), Expect = 2.1
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 451 VEERLREKCQNPAELRLVHILVRSSDPSHLVYIDNAGNLQHPEDKLNFRLLEGIDGFPES 510
++ L E+ Q P LR I+++ S +Y AG Q K ++ + S
Sbjct: 92 LDMNLNEEKQQP--LREKDIIIKREMVSQYLYTSKAGMSQKESSKSAMMYIQEL----RS 145
Query: 511 AVKVLAS-GCLQNMLLKSLQMDPVFWESQGGAQGLKQVLQTLEQ 553
++ + CL+++ + SL +PV W GA+GL +L L++
Sbjct: 146 GLRDMPLLSCLESLRV-SLNNNPVSWVQTFGAEGLASLLDILKR 188
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 31.6 bits (70), Expect = 2.1
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 451 VEERLREKCQNPAELRLVHILVRSSDPSHLVYIDNAGNLQHPEDKLNFRLLEGIDGFPES 510
++ L E+ Q P LR I+++ S +Y AG Q K ++ + S
Sbjct: 101 LDMNLNEEKQQP--LREKDIIIKREMVSQYLYTSKAGMSQKESSKSAMMYIQEL----RS 154
Query: 511 AVKVLAS-GCLQNMLLKSLQMDPVFWESQGGAQGLKQVLQTLEQ 553
++ + CL+++ + SL +PV W GA+GL +L L++
Sbjct: 155 GLRDMPLLSCLESLRV-SLNNNPVSWVQTFGAEGLASLLDILKR 197
>gi|93102361 palladin [Homo sapiens]
Length = 1106
Score = 31.6 bits (70), Expect = 2.1
Identities = 47/170 (27%), Positives = 59/170 (34%), Gaps = 19/170 (11%)
Query: 96 GH-RARVDRSRESPGGDLRHPGRVR--RDITLSGHPRLSTQHVVLLRED-EVGDPGTKDL 151
GH R RSR GD P + R R L L+ Q L R D +V T DL
Sbjct: 883 GHPHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDL 942
Query: 152 GHPQHGSPIQETQSEVVTLVSPLPGSDMAALPAWRATSGLTLWPHTAEGRDLLG--AENR 209
G P++ P S L L + P T+ + A NR
Sbjct: 943 SWQLDGKPVR-------------PDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNR 989
Query: 210 ALTGGQQAEDPTLASGAHQWPGSVEKLQGSVWCDAETLLSSSRTGGQAPP 259
A E A AH+ P +EKLQ + D + R G PP
Sbjct: 990 AGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPP 1039
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 31.6 bits (70), Expect = 2.1
Identities = 70/281 (24%), Positives = 100/281 (35%), Gaps = 83/281 (29%)
Query: 32 RFPPQRPSAG-----PDPGPMEPQGVTGAPATHIR----QALSSSRRQRARNMGFWRSRA 82
R PP+ P G PDPGP+ G P ++ Q L S R RN+
Sbjct: 851 RAPPEPPDPGAPRPPPDPGPLPLPGPREKPTFVVQVSTEQLLMSLREDVTRNL------- 903
Query: 83 LPRNSILVCAEEQGHRARVDRSRES---PGGDLRHPGRVRRDITLSGHPR------LSTQ 133
E+G AR R++ PG + PG + RD T+ G+ + L
Sbjct: 904 ---------LGEKGATARETGPRKAGRGPGNREKVPG-LNRDPTVLGNGKQAPSLSLPVN 953
Query: 134 HVVLLREDEVGDPGTKD-------LGHPQHGSPI-----------QETQSEVVTLVSPLP 175
V +L + PG ++ LG P+ + +E E L SP
Sbjct: 954 GVTVLENGDQRAPGIEEKAAENGALGSPEREEKVLENGELTPPRREEKALENGELRSPEA 1013
Query: 176 GSDMAALPAWRATSGLTLWPHTAEGRDLLGAENRALTGGQQAEDPTLASGAHQWPGSVEK 235
G + GLT P +E + +EN L + E P +G + PG EK
Sbjct: 1014 GEKVL------VNGGLT--PPKSEDK---VSENGGLRFPRNTERPP-ETGPWRAPGPWEK 1061
Query: 236 LQGSVWCDAETL-----------------LSSSRTGGQAPP 259
S W A T+ + SSR GG+ P
Sbjct: 1062 TPES-WGPAPTIGEPAPETSLERAPAPSAVVSSRNGGETAP 1101
>gi|70608109 integrator complex subunit 8 [Homo sapiens]
Length = 995
Score = 31.6 bits (70), Expect = 2.1
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 440 CGFEPEPSDPCVEERLREKCQNPAELRL-VHILVRSSDPSHLVYIDNAGNLQHPEDKLNF 498
C FE + +E+ LR+ C +PA ++L V L ++S PS ++ +Q P D
Sbjct: 23 CWFEFLLEESLLEKHLRKPCPDPAPVQLIVQFLEQASKPS----VNEQNQVQPPPDNKRN 78
Query: 499 RLLE 502
R+L+
Sbjct: 79 RILK 82
>gi|223633935 hypothetical protein LOC254427 [Homo sapiens]
Length = 435
Score = 31.2 bits (69), Expect = 2.7
Identities = 51/218 (23%), Positives = 79/218 (36%), Gaps = 44/218 (20%)
Query: 34 PPQRPSAGPDPGPMEPQGVTGAPATHI-----------RQALSSSRRQRARNMGFWRSRA 82
PP+R P P P+ + P + +ALS + R G WR+ A
Sbjct: 170 PPRRELRAPSPPVEHPRLLRSVPTPLVMAQKISERMAGNEALSPTSPFREGRPGEWRTPA 229
Query: 83 LPRNSILVCAEEQGHRARVDRSRESPGGDLRHPGRVRRDITLSGHPRLSTQHVVLLREDE 142
AR RS + PG HP + + PR + +++
Sbjct: 230 ----------------ARGPRSGD-PGPGPSHPAQPKA-------PRFPSN--IIVTNGA 263
Query: 143 VGDPGTKDLGHPQHGSPIQETQSEVVTLVSPLPGSDMAALPAWRATSGLTLWPH-TAEGR 201
+P + L +QE +++V+ + G+ AA A G P A GR
Sbjct: 264 AREP-RRTLSRA--AVSVQERRAQVLATIHGHAGAFPAAGDAGEGAPGGGSSPERVARGR 320
Query: 202 DLLGAENRALTGGQQAEDPTLASGAHQWPGSVEKLQGS 239
L G GGQ P LA+G +P + E L+ +
Sbjct: 321 GLPGPAESLRAGGQAPRGPALANG---FPSAHEALKSA 355
>gi|239753106 PREDICTED: similar to hCG1817845 [Homo sapiens]
Length = 1090
Score = 31.2 bits (69), Expect = 2.7
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 145 DPGTKDLGHPQHGSPIQETQSEVVTLVSPLPGSDMAALPAWRATSGLTLWPH 196
D GT + P G+ T + +T+ +P G+DM L T G +L+ H
Sbjct: 460 DTGTLTIPAPTQGAHYSSTDTGTLTIAAPTRGTDMWMLTIPALTRGRSLFQH 511
>gi|145309324 FH2 domain containing 1 [Homo sapiens]
Length = 1143
Score = 31.2 bits (69), Expect = 2.7
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 11/113 (9%)
Query: 34 PPQRPSAGPDPGPMEPQGVTGAPATHIRQALSSSRRQRARNMGFWRS----RALPRNSIL 89
PP P G P P P G+ P TH+ +++R R+ FW++ + + +I
Sbjct: 61 PPPPPLPGEPPIPPPPPGL--PPTTHMNGYSHLGKKKRMRSF-FWKTIPEEQVRGKTNIW 117
Query: 90 VCAEEQGHRARVD-RSRESPGG---DLRHPGRVRRDITLSGHPRLSTQHVVLL 138
A Q H ++D ++ E G D RR TL+ R + + + +L
Sbjct: 118 TLAARQEHHYQIDTKTIEELFGQQEDTTKSSLPRRGRTLNSSFREAREEITIL 170
>gi|13787217 FAT tumor suppressor 2 precursor [Homo sapiens]
Length = 4349
Score = 31.2 bits (69), Expect = 2.7
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 58/232 (25%)
Query: 373 PDVQHLSDPDEDQNSLALGWLQYQALLAHSCNW----PGQAPCPGIHHTEWARLALFDFL 428
P V H SD D++ NSL L Y+ L + + P + ++ + F F
Sbjct: 1784 PFVIHASDSDKEANSL----LVYKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSFQFC 1839
Query: 429 LQVHDRLDRYCCGFEPEPSDPCVE--------ERLREKCQNPAELRLVH-----ILVRSS 475
+ VHD+ F P P+ + R E+ A + +H ++VR+S
Sbjct: 1840 VYVHDQGSPVL--FAPRPAQVIIHVRDVNDSPPRFSEQIYEVAIVGPIHPGMELLMVRAS 1897
Query: 476 D-PSHLVYIDNAGNLQ-----HP---------------EDKLNFRLLEGIDGFPESAVKV 514
D S + Y GN HP KL R +G+ + ++A+
Sbjct: 1898 DEDSEVNYSIKTGNADEAVTIHPVTGSISVLNPAFLGLSRKLTIRASDGL--YQDTALVK 1955
Query: 515 LASGCLQNMLLKSLQMD-PVFWESQGGAQGLKQVLQTLEQRGQVLLGHIQKH 565
++ L +L KSLQ D V+W + +K+ LQ +++ V+LG H
Sbjct: 1956 IS---LTQVLDKSLQFDQDVYWAA------VKENLQ--DRKALVILGAQGNH 1996
>gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 30.8 bits (68), Expect = 3.5
Identities = 48/184 (26%), Positives = 71/184 (38%), Gaps = 34/184 (18%)
Query: 4 WLRRKLRGKRRPVIAFCLLMILSAMAVTRFPPQRPSAGPDPGPMEPQGVTGA-------- 55
WLRR+ R + RP + P PS PG G + A
Sbjct: 58 WLRRRSRSRSRPFSS---------------GPSGPSGPSSPGGPSSGGASPASEGSAMSP 102
Query: 56 --PATHIRQALSSSRRQRARNMGFWRSRALP--RNSILVCAEEQGHRARVDRSRESPGGD 111
P + ++ S R R R + +RSR+L R+ + + R R+ RSRE
Sbjct: 103 PPPRSSSLRSRSRRARSRLRLLRRFRSRSLSLLRSLERLRSSLSRLRERLRRSRERERRR 162
Query: 112 LRHPGRVRRDITLSGHPRLSTQHVVLLRE----DEVGDPGTKDLGHPQHGSPIQETQSEV 167
R R R +L R ++ + E DEVG P LG P+ P Q+T +
Sbjct: 163 SRSLSRSRLR-SLRSRSRSRSRSLCGSGEGPGLDEVGRPVW--LGSPRDRPPPQDTGRPI 219
Query: 168 VTLV 171
+ L+
Sbjct: 220 LPLI 223
>gi|239751841 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 30.8 bits (68), Expect = 3.5
Identities = 48/184 (26%), Positives = 71/184 (38%), Gaps = 34/184 (18%)
Query: 4 WLRRKLRGKRRPVIAFCLLMILSAMAVTRFPPQRPSAGPDPGPMEPQGVTGA-------- 55
WLRR+ R + RP + P PS PG G + A
Sbjct: 58 WLRRRSRSRSRPFSS---------------GPSGPSGPSSPGGPSSGGASPASEGSAMSP 102
Query: 56 --PATHIRQALSSSRRQRARNMGFWRSRALP--RNSILVCAEEQGHRARVDRSRESPGGD 111
P + ++ S R R R + +RSR+L R+ + + R R+ RSRE
Sbjct: 103 PPPRSSSLRSRSRRARSRLRLLRRFRSRSLSLLRSLERLRSSLSRLRERLRRSRERERRR 162
Query: 112 LRHPGRVRRDITLSGHPRLSTQHVVLLRE----DEVGDPGTKDLGHPQHGSPIQETQSEV 167
R R R +L R ++ + E DEVG P LG P+ P Q+T +
Sbjct: 163 SRSLSRSRLR-SLRSRSRSRSRSLCGSGEGPGLDEVGRPVW--LGSPRDRPPPQDTGRPI 219
Query: 168 VTLV 171
+ L+
Sbjct: 220 LPLI 223
>gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo
sapiens]
Length = 231
Score = 30.8 bits (68), Expect = 3.5
Identities = 48/184 (26%), Positives = 71/184 (38%), Gaps = 34/184 (18%)
Query: 4 WLRRKLRGKRRPVIAFCLLMILSAMAVTRFPPQRPSAGPDPGPMEPQGVTGA-------- 55
WLRR+ R + RP + P PS PG G + A
Sbjct: 58 WLRRRSRSRSRPFSS---------------GPSGPSGPSSPGGPSSGGASPASEGSAMSP 102
Query: 56 --PATHIRQALSSSRRQRARNMGFWRSRALP--RNSILVCAEEQGHRARVDRSRESPGGD 111
P + ++ S R R R + +RSR+L R+ + + R R+ RSRE
Sbjct: 103 PPPRSSSLRSRSRRARSRLRLLRRFRSRSLSLLRSLERLRSSLSRLRERLRRSRERERRR 162
Query: 112 LRHPGRVRRDITLSGHPRLSTQHVVLLRE----DEVGDPGTKDLGHPQHGSPIQETQSEV 167
R R R +L R ++ + E DEVG P LG P+ P Q+T +
Sbjct: 163 SRSLSRSRLR-SLRSRSRSRSRSLCGSGEGPGLDEVGRPVW--LGSPRDRPPPQDTGRPI 219
Query: 168 VTLV 171
+ L+
Sbjct: 220 LPLI 223
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 30.8 bits (68), Expect = 3.5
Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 2/118 (1%)
Query: 118 VRRDITLSGHPRLSTQHVVLLREDEVGDPGTKDLGHPQHGSPIQETQSEVVTLVSPLPGS 177
VRR+ + H R ++ H L ED G + GSP TL + G
Sbjct: 3964 VRREEPTTFHSRPASTHTTLFTEDST-TSGLTEESTAFPGSPASTQTGLPATLTTADLGE 4022
Query: 178 DMAALPAWRATSGLTLWPHTAEGRDLLGAENRALTGGQQAEDPTLASGAHQWPGSVEK 235
+ P+ ++G L P + L+G + E TL G+ P EK
Sbjct: 4023 ESTTFPSSSGSTGTKLSPARSTTSGLVGESTPSRLSPSSTETTTL-PGSPTTPSLSEK 4079
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 30.4 bits (67), Expect = 4.6
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Query: 189 SGLTLWPHTAEGRDLLGAENRALTGGQQAEDPTLASGAHQWPGSVEKLQGSVWCDAETLL 248
SG++ A G GAEN+A G S W G V++ G W
Sbjct: 1344 SGVSWVGEEAIGGSWTGAENQASEGSWAGAGAGNMSSVSYWAGVVDQAGGGSWAG----- 1398
Query: 249 SSSRTGGQAPPWLTD 263
+S ++GG + P D
Sbjct: 1399 TSDQSGGGSKPRFED 1413
>gi|239754483 PREDICTED: similar to FLJ00049 protein [Homo sapiens]
Length = 177
Score = 30.4 bits (67), Expect = 4.6
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 12/84 (14%)
Query: 35 PQRPSAGPDPGPMEPQGVTGAPATHIRQALSSSRRQRARNMGFWRS--RALPRNSILVCA 92
P +PSA P P++PQ V A + + + W + R +P+ S L
Sbjct: 81 PLQPSAWPGINPLQPQEVVPPQAAN----------KAVPELCLWMTEPRPVPQGSALRLC 130
Query: 93 EEQGHRARVDRSRESPGGDLRHPG 116
RA V SR P +R PG
Sbjct: 131 PGTPGRAHVGASRSLPAMRMRCPG 154
>gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens]
Length = 904
Score = 30.4 bits (67), Expect = 4.6
Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 19/72 (26%)
Query: 35 PQRPSAGPDPGPMEPQGVTGAPATHIRQAL------------------SSSRRQRARNMG 76
P P + PDP P PQG GAP Q S+SR Q+ARN
Sbjct: 362 PAVPPSAPDPRPATPQG-GGAPRVAAPQTTLSSSSTSAATVDPPAWTPSASRTQQARNKF 420
Query: 77 FWRSRALPRNSI 88
F S P S+
Sbjct: 421 FQTSAVPPGTSL 432
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 30.0 bits (66), Expect = 6.0
Identities = 32/114 (28%), Positives = 46/114 (40%), Gaps = 11/114 (9%)
Query: 115 PGRVRRDITLSGHPRLSTQHVVLLRED----EVGDPGTKDLGHPQHGSPIQETQSEVVTL 170
PG +D H + + H + +D ++ G + GH G P
Sbjct: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120
Query: 171 VSPLPGSDMAALPAWRATSGLTLWPHTAE---GRDLLGAENRALTGGQQAEDPT 221
SPL GS+ A+ P SG + P + G L GA+ +AL GQQ PT
Sbjct: 121 PSPLGGSEHASSPV--PASGPSSGPQMSSGPGGAPLDGADPQAL--GQQNRGPT 170
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 30.0 bits (66), Expect = 6.0
Identities = 32/114 (28%), Positives = 46/114 (40%), Gaps = 11/114 (9%)
Query: 115 PGRVRRDITLSGHPRLSTQHVVLLRED----EVGDPGTKDLGHPQHGSPIQETQSEVVTL 170
PG +D H + + H + +D ++ G + GH G P
Sbjct: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120
Query: 171 VSPLPGSDMAALPAWRATSGLTLWPHTAE---GRDLLGAENRALTGGQQAEDPT 221
SPL GS+ A+ P SG + P + G L GA+ +AL GQQ PT
Sbjct: 121 PSPLGGSEHASSPV--PASGPSSGPQMSSGPGGAPLDGADPQAL--GQQNRGPT 170
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 30.0 bits (66), Expect = 6.0
Identities = 32/114 (28%), Positives = 46/114 (40%), Gaps = 11/114 (9%)
Query: 115 PGRVRRDITLSGHPRLSTQHVVLLRED----EVGDPGTKDLGHPQHGSPIQETQSEVVTL 170
PG +D H + + H + +D ++ G + GH G P
Sbjct: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120
Query: 171 VSPLPGSDMAALPAWRATSGLTLWPHTAE---GRDLLGAENRALTGGQQAEDPT 221
SPL GS+ A+ P SG + P + G L GA+ +AL GQQ PT
Sbjct: 121 PSPLGGSEHASSPV--PASGPSSGPQMSSGPGGAPLDGADPQAL--GQQNRGPT 170
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 30.0 bits (66), Expect = 6.0
Identities = 32/114 (28%), Positives = 46/114 (40%), Gaps = 11/114 (9%)
Query: 115 PGRVRRDITLSGHPRLSTQHVVLLRED----EVGDPGTKDLGHPQHGSPIQETQSEVVTL 170
PG +D H + + H + +D ++ G + GH G P
Sbjct: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120
Query: 171 VSPLPGSDMAALPAWRATSGLTLWPHTAE---GRDLLGAENRALTGGQQAEDPT 221
SPL GS+ A+ P SG + P + G L GA+ +AL GQQ PT
Sbjct: 121 PSPLGGSEHASSPV--PASGPSSGPQMSSGPGGAPLDGADPQAL--GQQNRGPT 170
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 30.0 bits (66), Expect = 6.0
Identities = 32/114 (28%), Positives = 46/114 (40%), Gaps = 11/114 (9%)
Query: 115 PGRVRRDITLSGHPRLSTQHVVLLRED----EVGDPGTKDLGHPQHGSPIQETQSEVVTL 170
PG +D H + + H + +D ++ G + GH G P
Sbjct: 61 PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY 120
Query: 171 VSPLPGSDMAALPAWRATSGLTLWPHTAE---GRDLLGAENRALTGGQQAEDPT 221
SPL GS+ A+ P SG + P + G L GA+ +AL GQQ PT
Sbjct: 121 PSPLGGSEHASSPV--PASGPSSGPQMSSGPGGAPLDGADPQAL--GQQNRGPT 170
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,937,159
Number of Sequences: 37866
Number of extensions: 1350521
Number of successful extensions: 4782
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 4723
Number of HSP's gapped (non-prelim): 102
length of query: 575
length of database: 18,247,518
effective HSP length: 108
effective length of query: 467
effective length of database: 14,157,990
effective search space: 6611781330
effective search space used: 6611781330
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.