Guide to the Human Genome
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Name: INTS8 Sequence: fasta or formatted (995aa) NCBI GI: 70608109
Description:

integrator complex subunit 8

Referenced in:

Polyadenylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         68           2
 C cysteine            2.6         26           2
 D aspartate           4.4         44           1
 E glutamate           7.0         70           2
 F phenylalanine       3.4         34           2
 G glycine             3.1         31           1
 H histidine           2.2         22           2
 I isoleucine          6.0         60           2
 K lysine              6.2         62           3
 L leucine            13.0        129           3
 M methionine          2.3         23           1
 N asparagine          4.3         43           2
 P proline             4.6         46           3
 Q glutamine           6.0         60           2
 R arginine            4.8         48           2
 S serine              7.1         71           2
 T threonine           4.7         47           2
 V valine              7.1         71           3
 W tryptophan          1.1         11           1
 Y tyrosine            2.9         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   integrator complex subunit 8 
FAM46A                0.005   hypothetical protein LOC55603 
MYH4                  0.004   myosin, heavy polypeptide 4, skeletal muscle 
HMMR                  0.004   hyaluronan-mediated motility receptor isoform d [Ho...
HMMR                  0.004   hyaluronan-mediated motility receptor isoform a [Ho...
HMMR                  0.004   hyaluronan-mediated motility receptor isoform c [Ho...
HMMR                  0.004   hyaluronan-mediated motility receptor isoform b [Ho...
LOC100130736          0.004   PREDICTED: similar to tubulin, beta 5 
LOC100130736          0.004   PREDICTED: similar to tubulin, beta 5 
PMFBP1                0.004   polyamine modulated factor 1 binding protein 1 isof...
LOC729085             0.004   hypothetical protein LOC729085 
RAB34                 0.003   Ras-related protein RAB34 isoform 5 
RAB34                 0.003   Ras-related protein RAB34 isoform 1 
MYH13                 0.003   myosin, heavy polypeptide 13, skeletal muscle [Homo...
GPAM                  0.003   mitochondrial glycerol 3-phosphate acyltransferase ...
PMFBP1                0.003   polyamine modulated factor 1 binding protein 1 isof...
SMG1                  0.003   PI-3-kinase-related kinase SMG-1 
ZBTB5                 0.003   zinc finger and BTB domain containing 5 
TLN1                  0.003   talin 1 
DGKH                  0.003   diacylglycerol kinase, eta isoform 1 
DGKH                  0.003   diacylglycerol kinase, eta isoform 2 
SMC3                  0.003   structural maintenance of chromosomes 3 
NOP56                 0.003   nucleolar protein 5A 
MYH6                  0.003   myosin heavy chain 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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