Guide to the Human Genome
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Name: FJX1 Sequence: fasta or formatted (437aa) NCBI GI: 18765711
Description:

four jointed box 1

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.3         58           3
 C cysteine            0.9          4           1
 D aspartate           3.9         17           1
 E glutamate           5.7         25           2
 F phenylalanine       2.7         12           1
 G glycine             8.7         38           2
 H histidine           2.5         11           1
 I isoleucine          0.9          4           1
 K lysine              1.1          5           1
 L leucine            14.2         62           2
 M methionine          1.1          5           1
 N asparagine          2.1          9           1
 P proline             7.8         34           3
 Q glutamine           4.1         18           1
 R arginine           12.6         55           2
 S serine              5.0         22           2
 T threonine           3.0         13           1
 V valine              5.5         24           3
 W tryptophan          3.0         13           1
 Y tyrosine            1.8          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   four jointed box 1 
LOC729506             0.016   PREDICTED: hypothetical protein 
C10orf47              0.015   hypothetical protein LOC254427 
FAM20A                0.015   family with sequence similarity 20, member A 
ANKRD33B              0.014   PREDICTED: ankyrin repeat domain 33B 
LOC729506             0.014   PREDICTED: hypothetical protein 
LOC729506             0.014   PREDICTED: hypothetical protein 
PLEKHH3               0.014   pleckstrin homology domain containing, family H (wit...
EHBP1L1               0.014   tangerin 
ZSCAN10               0.014   zinc finger and SCAN domain containing 10 
TEAD2                 0.014   TEA domain family member 2 
CASKIN1               0.013   CASK interacting protein 1 
LOC100127891          0.013   PREDICTED: hypothetical protein 
LOC644794             0.013   PREDICTED: hypothetical protein 
LOC644794             0.013   PREDICTED: hypothetical protein 
LOC644794             0.013   PREDICTED: hypothetical protein 
LOC644794             0.013   PREDICTED: hypothetical protein 
MLL2                  0.013   myeloid/lymphoid or mixed-lineage leukemia 2 
THRAP3                0.013   thyroid hormone receptor associated protein 3 [Homo...
LMTK3                 0.012   lemur tyrosine kinase 3 
PDCD7                 0.012   programmed cell death 7 
APC2                  0.012   adenomatosis polyposis coli 2 
FMNL1                 0.012   formin-like 1 
MNT                   0.012   MAX binding protein 
SETBP1                0.010   SET binding protein 1 isoform a 
UBN2                  0.010   ubinuclein 2 
LOC100294438          0.010   PREDICTED: hypothetical protein 
SCYL1                 0.010   SCY1-like 1 isoform A 
FAM8A1                0.010   family with sequence similarity 8, member A1 
ZCCHC2                0.010   zinc finger, CCHC domain containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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