BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|207028905 microfibrillar-associated protein 2 isoform b precursor [Homo sapiens] (182 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|207028935 microfibrillar-associated protein 2 isoform b precu... 390 e-109 gi|207028905 microfibrillar-associated protein 2 isoform b precu... 390 e-109 gi|4505157 microfibrillar-associated protein 2 isoform a precurs... 385 e-108 gi|9665259 microfibrillar-associated protein 2 isoform a precurs... 385 e-108 gi|4505089 microfibrillar associated protein 5 [Homo sapiens] 87 1e-17 gi|118600967 shroom family member 4 [Homo sapiens] 36 0.016 gi|122937283 6720455I24Rik homolog [Homo sapiens] 35 0.027 gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 33 0.10 gi|116805330 small conductance calcium-activated potassium chann... 33 0.18 gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 32 0.23 gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 32 0.23 gi|54792138 helicase with zinc finger domain [Homo sapiens] 32 0.30 gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens] 32 0.39 gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens] 32 0.39 gi|221139761 zinc finger protein 853 [Homo sapiens] 31 0.67 gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens] 31 0.67 gi|195972803 myocyte enhancer factor 2A isoform 3 [Homo sapiens] 31 0.67 gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens] 31 0.67 gi|195972799 myocyte enhancer factor 2A isoform 1 [Homo sapiens] 31 0.67 gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo... 31 0.67 gi|150170670 piccolo isoform 2 [Homo sapiens] 31 0.67 gi|150378539 piccolo isoform 1 [Homo sapiens] 31 0.67 gi|38348304 von Willebrand factor A domain containing 2 [Homo sa... 31 0.67 gi|225543461 tetratricopeptide repeat, ankyrin repeat and coiled... 30 0.88 gi|90903231 huntingtin [Homo sapiens] 30 0.88 gi|196114999 special AT-rich sequence binding protein 1 [Homo sa... 30 0.88 gi|4506791 special AT-rich sequence binding protein 1 [Homo sapi... 30 0.88 gi|93141033 PAX interacting protein 1 [Homo sapiens] 30 0.88 gi|221316616 extracellular matrix protein 1 isoform 2 precursor ... 30 1.1 gi|221316614 extracellular matrix protein 1 isoform 1 precursor ... 30 1.1 >gi|207028935 microfibrillar-associated protein 2 isoform b precursor [Homo sapiens] Length = 182 Score = 390 bits (1002), Expect = e-109 Identities = 182/182 (100%), Positives = 182/182 (100%) Query: 1 MRAAYLFLLFLPGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQ 60 MRAAYLFLLFLPGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQ Sbjct: 1 MRAAYLFLLFLPGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQ 60 Query: 61 FQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNEV 120 FQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNEV Sbjct: 61 FQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNEV 120 Query: 121 CFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSCG 180 CFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSCG Sbjct: 121 CFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSCG 180 Query: 181 SC 182 SC Sbjct: 181 SC 182 >gi|207028905 microfibrillar-associated protein 2 isoform b precursor [Homo sapiens] Length = 182 Score = 390 bits (1002), Expect = e-109 Identities = 182/182 (100%), Positives = 182/182 (100%) Query: 1 MRAAYLFLLFLPGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQ 60 MRAAYLFLLFLPGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQ Sbjct: 1 MRAAYLFLLFLPGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQ 60 Query: 61 FQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNEV 120 FQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNEV Sbjct: 61 FQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNEV 120 Query: 121 CFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSCG 180 CFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSCG Sbjct: 121 CFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSCG 180 Query: 181 SC 182 SC Sbjct: 181 SC 182 >gi|4505157 microfibrillar-associated protein 2 isoform a precursor [Homo sapiens] Length = 183 Score = 385 bits (990), Expect = e-108 Identities = 182/183 (99%), Positives = 182/183 (99%), Gaps = 1/183 (0%) Query: 1 MRAAYLFLLFLP-GLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEE 59 MRAAYLFLLFLP GLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEE Sbjct: 1 MRAAYLFLLFLPAGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEE 60 Query: 60 QFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNE 119 QFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNE Sbjct: 61 QFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNE 120 Query: 120 VCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSC 179 VCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSC Sbjct: 121 VCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSC 180 Query: 180 GSC 182 GSC Sbjct: 181 GSC 183 >gi|9665259 microfibrillar-associated protein 2 isoform a precursor [Homo sapiens] Length = 183 Score = 385 bits (990), Expect = e-108 Identities = 182/183 (99%), Positives = 182/183 (99%), Gaps = 1/183 (0%) Query: 1 MRAAYLFLLFLP-GLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEE 59 MRAAYLFLLFLP GLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEE Sbjct: 1 MRAAYLFLLFLPAGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEE 60 Query: 60 QFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNE 119 QFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNE Sbjct: 61 QFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNE 120 Query: 120 VCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSC 179 VCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSC Sbjct: 121 VCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSC 180 Query: 180 GSC 182 GSC Sbjct: 181 GSC 183 >gi|4505089 microfibrillar associated protein 5 [Homo sapiens] Length = 173 Score = 86.7 bits (213), Expect = 1e-17 Identities = 33/59 (55%), Positives = 48/59 (81%) Query: 95 DCREEQYPCTRLYSIHRPCKQCLNEVCFYSLRRVYVINKEICVRTVCAHEELLRADLCR 153 +C +E++ CTRLYS+HRP KQC++++CF SLRR+Y++NKEIC R VC E ++ +LCR Sbjct: 83 ECWDEKFTCTRLYSVHRPVKQCIHQLCFTSLRRMYIVNKEICSRLVCKEHEAMKDELCR 141 >gi|118600967 shroom family member 4 [Homo sapiens] Length = 1493 Score = 36.2 bits (82), Expect = 0.016 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 10/67 (14%) Query: 93 PLDCREEQYPCTRLYS-------IHRPCKQCLNEVCFYSLRRVYVINKEICVRTVCAHEE 145 PL C + Y T YS +H PC C E+C L+R + N C C H + Sbjct: 874 PLHCGDFDYHRTCSYSCSVQGALVHDPCIYCSGEICPALLKRNMMPN---CYNCRCHHHQ 930 Query: 146 LLRADLC 152 +R +C Sbjct: 931 CIRCSVC 937 >gi|122937283 6720455I24Rik homolog [Homo sapiens] Length = 1413 Score = 35.4 bits (80), Expect = 0.027 Identities = 17/53 (32%), Positives = 27/53 (50%) Query: 94 LDCREEQYPCTRLYSIHRPCKQCLNEVCFYSLRRVYVINKEICVRTVCAHEEL 146 L C + PCTRL+S + VC + +RVY ++++IC + C L Sbjct: 1344 LACIKVSRPCTRLFSETKAFPVWEGGVCHHVYKRVYRVHQDICFKESCESTSL 1396 >gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo sapiens] Length = 1560 Score = 33.5 bits (75), Expect = 0.10 Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 9/86 (10%) Query: 12 PGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQFQFQSQQQVQQ 71 P L Q Q PLPP P H+ + S + + + P PS+ Q QF Q + Sbjct: 860 PPLRPQSQPPEGPLPPAP-HLPPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHK 918 Query: 72 EVIPAPT----PEPGNAELEPTEPGP 93 P PT PEP P P P Sbjct: 919 SPTPPPTLHLVPEPA----APPPPPP 940 >gi|116805330 small conductance calcium-activated potassium channel protein 3 isoform a [Homo sapiens] Length = 731 Score = 32.7 bits (73), Expect = 0.18 Identities = 16/41 (39%), Positives = 22/41 (53%) Query: 54 PRPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPL 94 P+P + Q Q Q QQQ QQ+ P P + + +P PG L Sbjct: 61 PQPPQLQQQQQQQQQQQQQQPPHPLSQLAQLQSQPVHPGLL 101 Score = 30.4 bits (67), Expect = 0.88 Identities = 17/47 (36%), Positives = 22/47 (46%) Query: 54 PRPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQ 100 P +EQ Q Q QQQ QQ PAP P +P P +++Q Sbjct: 24 PSSGDEQQQQQQQQQQQQPPPPAPPAAPQQPLGPSLQPQPPQLQQQQ 70 Score = 28.9 bits (63), Expect = 2.6 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Query: 54 PRPSEEQFQFQSQQQVQQEVIPAPTP-----EPGNAELEPTEP 91 P PS Q Q QQQ QQ+ P P P +P L+P P Sbjct: 22 PCPSSGDEQQQQQQQQQQQQPPPPAPPAAPQQPLGPSLQPQPP 64 >gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo sapiens] Length = 2231 Score = 32.3 bits (72), Expect = 0.23 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 9/69 (13%) Query: 12 PGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPR--------PSEEQFQF 63 PG +A QY +PP + Y Q P YY Q P PS+ Q ++ Sbjct: 509 PGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQP-YYSQQPQPPHLPPQAQYLPSQSQQRY 567 Query: 64 QSQQQVQQE 72 Q QQ + QE Sbjct: 568 QPQQDMSQE 576 >gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 [Homo sapiens] Length = 2178 Score = 32.3 bits (72), Expect = 0.23 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 9/69 (13%) Query: 12 PGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPR--------PSEEQFQF 63 PG +A QY +PP + Y Q P YY Q P PS+ Q ++ Sbjct: 509 PGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQP-YYSQQPQPPHLPPQAQYLPSQSQQRY 567 Query: 64 QSQQQVQQE 72 Q QQ + QE Sbjct: 568 QPQQDMSQE 576 >gi|54792138 helicase with zinc finger domain [Homo sapiens] Length = 1942 Score = 32.0 bits (71), Expect = 0.30 Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 13/102 (12%) Query: 24 PLPPFPDHVQYTHYSDQIDN-PDYYDYQEVTPRPSE-EQFQFQSQQQVQQ---EVIPAPT 78 P PPFP Q+T + Q +N P+ ++ P+P++ Q Q Q QQ QQ ++ PA Sbjct: 1367 PRPPFPIPQQHTLLNQQQNNLPE--QPNQIPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQ 1424 Query: 79 PEPGNAEL------EPTEPGPLDCREEQYPCTRLYSIHRPCK 114 P NA P P EQ P L H P + Sbjct: 1425 AGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLR 1466 >gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens] Length = 374 Score = 31.6 bits (70), Expect = 0.39 Identities = 38/166 (22%), Positives = 55/166 (33%), Gaps = 23/166 (13%) Query: 21 DLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQFQFQSQQQVQQEVIPAPTPE 80 DLD LPP P P +E P P +Q + P P P Sbjct: 100 DLDLLPPPPP-----------PPPVLLPSEEEAPAPMGASLIADLEQL---HLSPPPPPP 145 Query: 81 PGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNEVCFYSLRRVYVINKEICVRTV 140 AE +PGPL EE+ P + K ++C + + V +E+ V + Sbjct: 146 QAPAEGPSVQPGPLRPMEEELPPPPAEPVE---KGASTDICAFCHKT--VSPRELAVEAM 200 Query: 141 CA--HEELLRADLCRDKFSKCGVMASSG--LCQSVAASCARSCGSC 182 H + CR + + G LC+ CG C Sbjct: 201 KRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCYQDTLERCGKC 246 >gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens] Length = 373 Score = 31.6 bits (70), Expect = 0.39 Identities = 38/166 (22%), Positives = 55/166 (33%), Gaps = 23/166 (13%) Query: 21 DLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQFQFQSQQQVQQEVIPAPTPE 80 DLD LPP P P +E P P +Q + P P P Sbjct: 100 DLDLLPPPPP-----------PPPVLLPSEEEAPAPMGASLIADLEQL---HLSPPPPPP 145 Query: 81 PGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNEVCFYSLRRVYVINKEICVRTV 140 AE +PGPL EE+ P + K ++C + + V +E+ V + Sbjct: 146 QAPAEGPSVQPGPLRPMEEELPPPPAEPVE---KGASTDICAFCHKT--VSPRELAVEAM 200 Query: 141 CA--HEELLRADLCRDKFSKCGVMASSG--LCQSVAASCARSCGSC 182 H + CR + + G LC+ CG C Sbjct: 201 KRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCYQDTLERCGKC 246 >gi|221139761 zinc finger protein 853 [Homo sapiens] Length = 659 Score = 30.8 bits (68), Expect = 0.67 Identities = 17/51 (33%), Positives = 25/51 (49%) Query: 50 QEVTPRPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQ 100 QE + ++Q Q Q+Q+QQ+ + P EP E E P+D EQ Sbjct: 283 QEQLQQQQQQQLLQQQQEQLQQQQLQPPPLEPEEEEEVELELMPVDLGSEQ 333 >gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens] Length = 429 Score = 30.8 bits (68), Expect = 0.67 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%) Query: 55 RPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGP 93 R + FQ Q QQQ QQ+ P P P+P +P +P P Sbjct: 335 RMTPSGFQQQQQQQQQQQPPPPPQPQP-----QPPQPQP 368 >gi|195972803 myocyte enhancer factor 2A isoform 3 [Homo sapiens] Length = 437 Score = 30.8 bits (68), Expect = 0.67 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%) Query: 55 RPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGP 93 R + FQ Q QQQ QQ+ P P P+P +P +P P Sbjct: 343 RMTPSGFQQQQQQQQQQQPPPPPQPQP-----QPPQPQP 376 >gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens] Length = 497 Score = 30.8 bits (68), Expect = 0.67 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%) Query: 55 RPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGP 93 R + FQ Q QQQ QQ+ P P P+P +P +P P Sbjct: 403 RMTPSGFQQQQQQQQQQQPPPPPQPQP-----QPPQPQP 436 >gi|195972799 myocyte enhancer factor 2A isoform 1 [Homo sapiens] Length = 499 Score = 30.8 bits (68), Expect = 0.67 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%) Query: 55 RPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGP 93 R + FQ Q QQQ QQ+ P P P+P +P +P P Sbjct: 405 RMTPSGFQQQQQQQQQQQPPPPPQPQP-----QPPQPQP 438 >gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo sapiens] Length = 1158 Score = 30.8 bits (68), Expect = 0.67 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 6/50 (12%) Query: 37 YSDQIDNPDYYDYQEV------TPRPSEEQFQFQSQQQVQQEVIPAPTPE 80 Y+DQI+ DY D++ + P PS + + + +E PAP PE Sbjct: 235 YNDQIEREDYEDFEYIRRQKQPRPPPSRRRRPERVWPEPPEEKAPAPAPE 284 >gi|150170670 piccolo isoform 2 [Homo sapiens] Length = 4935 Score = 30.8 bits (68), Expect = 0.67 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 16/88 (18%) Query: 7 FLLFLPGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDN--PDYYD-----------YQEVT 53 F F+P Q Q + +PP + QY + S + P Y +Q+V+ Sbjct: 3864 FSQFIP---PQTQTESQLVPPTSPYTQYQYSSPALPTQAPTSYTQQSHFEQQTLYHQQVS 3920 Query: 54 PRPSEEQFQFQSQQQVQQEVIPAPTPEP 81 P ++ FQ + +V P PTP+P Sbjct: 3921 PYQTQPTFQAVATMSFTPQVQPTPTPQP 3948 >gi|150378539 piccolo isoform 1 [Homo sapiens] Length = 5142 Score = 30.8 bits (68), Expect = 0.67 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 16/88 (18%) Query: 7 FLLFLPGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDN--PDYYD-----------YQEVT 53 F F+P Q Q + +PP + QY + S + P Y +Q+V+ Sbjct: 3864 FSQFIP---PQTQTESQLVPPTSPYTQYQYSSPALPTQAPTSYTQQSHFEQQTLYHQQVS 3920 Query: 54 PRPSEEQFQFQSQQQVQQEVIPAPTPEP 81 P ++ FQ + +V P PTP+P Sbjct: 3921 PYQTQPTFQAVATMSFTPQVQPTPTPQP 3948 >gi|38348304 von Willebrand factor A domain containing 2 [Homo sapiens] Length = 725 Score = 30.8 bits (68), Expect = 0.67 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 15/62 (24%) Query: 95 DCREEQYPC-------TRLYSIHRPCKQ-------CLNEVC-FYSLRRVYVINKEICVRT 139 DCR E +PC R ++ + PC + L C FYS +RV++ + C RT Sbjct: 234 DCRVEAHPCEHRTLEMVREFAGNAPCWRGSRRTLAVLAAHCPFYSWKRVFLTHPATCYRT 293 Query: 140 VC 141 C Sbjct: 294 TC 295 >gi|225543461 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 isoform 1 [Homo sapiens] Length = 1861 Score = 30.4 bits (67), Expect = 0.88 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Query: 44 PDYYDYQEVTPRPSEEQFQFQ-SQQQVQQEVIPAPTPEPGNAELEPTEPGPLD 95 P + + + R EE Q Q SQQQ QQ +PAP + N E PT PG D Sbjct: 1401 PTNQEVKRLLARVEEECKQLQRSQQQKQQGPLPAPLNDSENEEDTPT-PGLSD 1452 >gi|90903231 huntingtin [Homo sapiens] Length = 3144 Score = 30.4 bits (67), Expect = 0.88 Identities = 16/45 (35%), Positives = 21/45 (46%) Query: 50 QEVTPRPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPL 94 Q+ + ++Q Q Q QQQ QQ P P P P P + PL Sbjct: 19 QQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPQLPQPPPQAQPL 63 Score = 29.6 bits (65), Expect = 1.5 Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 10/77 (12%) Query: 49 YQEVTPRPSEEQFQFQSQQQVQQEVIPAPTPEP----------GNAELEPTEPGPLDCRE 98 +Q+ + ++Q Q Q QQQ QQ+ P P P P L +P P Sbjct: 17 FQQQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPQLPQPPPQAQPLLPQPQPPPPPPPP 76 Query: 99 EQYPCTRLYSIHRPCKQ 115 P +HRP K+ Sbjct: 77 PPGPAVAEEPLHRPKKE 93 >gi|196114999 special AT-rich sequence binding protein 1 [Homo sapiens] Length = 763 Score = 30.4 bits (67), Expect = 0.88 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 6/54 (11%) Query: 58 EEQFQFQSQQQVQQEVIPAPTPE------PGNAELEPTEPGPLDCREEQYPCTR 105 ++Q Q Q QQQ QQ+ P P P+ P +PT P + EE TR Sbjct: 593 QQQQQQQQQQQQQQQAPPPPQPQQQPQTGPRLPPRQPTVASPAESDEENRQKTR 646 >gi|4506791 special AT-rich sequence binding protein 1 [Homo sapiens] Length = 763 Score = 30.4 bits (67), Expect = 0.88 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 6/54 (11%) Query: 58 EEQFQFQSQQQVQQEVIPAPTPE------PGNAELEPTEPGPLDCREEQYPCTR 105 ++Q Q Q QQQ QQ+ P P P+ P +PT P + EE TR Sbjct: 593 QQQQQQQQQQQQQQQAPPPPQPQQQPQTGPRLPPRQPTVASPAESDEENRQKTR 646 >gi|93141033 PAX interacting protein 1 [Homo sapiens] Length = 1069 Score = 30.4 bits (67), Expect = 0.88 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 6/62 (9%) Query: 60 QFQFQSQQQVQQEVIPAPTPEPGNAELEPTE---PGPLDCREEQYPCTRLY---SIHRPC 113 Q Q Q QQQ+ Q+ P P P + + + + P ++ Q+P +L+ +HRP Sbjct: 426 QLQQQQQQQISQQPYPQQPPHPFSQQQQQQQQAHPHQFSQQQLQFPQQQLHPPQQLHRPQ 485 Query: 114 KQ 115 +Q Sbjct: 486 QQ 487 >gi|221316616 extracellular matrix protein 1 isoform 2 precursor [Homo sapiens] Length = 415 Score = 30.0 bits (66), Expect = 1.1 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 14/97 (14%) Query: 20 YDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQFQFQSQQQVQQEVIPAPTP 79 Y P PP + H P + +V P PS+E Q Q++++PA P Sbjct: 43 YAAPPSPPLSRSLPMDHPDSSQHGPPFEGQSQVQPPPSQEATPLQ-----QEKLLPAQLP 97 Query: 80 EPGNAELEPTEPGPLDCREEQYPCTR-LYSIHRPCKQ 115 AE E P P +E P + L S+ P +Q Sbjct: 98 ----AEKEVGPPLP----QEAVPLQKELPSLQHPNEQ 126 >gi|221316614 extracellular matrix protein 1 isoform 1 precursor [Homo sapiens] Length = 540 Score = 30.0 bits (66), Expect = 1.1 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 14/97 (14%) Query: 20 YDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQFQFQSQQQVQQEVIPAPTP 79 Y P PP + H P + +V P PS+E Q Q++++PA P Sbjct: 43 YAAPPSPPLSRSLPMDHPDSSQHGPPFEGQSQVQPPPSQEATPLQ-----QEKLLPAQLP 97 Query: 80 EPGNAELEPTEPGPLDCREEQYPCTR-LYSIHRPCKQ 115 AE E P P +E P + L S+ P +Q Sbjct: 98 ----AEKEVGPPLP----QEAVPLQKELPSLQHPNEQ 126 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.322 0.138 0.444 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,164,037 Number of Sequences: 37866 Number of extensions: 524836 Number of successful extensions: 3240 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 80 Number of HSP's that attempted gapping in prelim test: 3013 Number of HSP's gapped (non-prelim): 251 length of query: 182 length of database: 18,247,518 effective HSP length: 96 effective length of query: 86 effective length of database: 14,612,382 effective search space: 1256664852 effective search space used: 1256664852 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.