Guide to the Human Genome
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Name: MFAP5 Sequence: fasta or formatted (173aa) NCBI GI: 4505089
Description:

microfibrillar associated protein 5

Referenced in:

Extracellular Matrix

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         11           2
 C cysteine            4.6          8           1
 D aspartate           6.9         12           2
 E glutamate           6.4         11           1
 F phenylalanine       3.5          6           1
 G glycine             2.9          5           1
 H histidine           1.7          3           1
 I isoleucine          4.0          7           2
 K lysine              4.0          7           1
 L leucine            12.1         21           2
 M methionine          2.3          4           1
 N asparagine          4.6          8           1
 P proline             6.9         12           2
 Q glutamine           3.5          6           1
 R arginine            7.5         13           2
 S serine              5.8         10           1
 T threonine           7.5         13           2
 V valine              6.4         11           1
 W tryptophan          1.2          2           1
 Y tyrosine            1.7          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   microfibrillar associated protein 5 
MFAP2                 0.186   microfibrillar-associated protein 2 isoform b precu...
MFAP2                 0.186   microfibrillar-associated protein 2 isoform b precu...
MFAP2                 0.186   microfibrillar-associated protein 2 isoform a precurs...
MFAP2                 0.186   microfibrillar-associated protein 2 isoform a precurs...
FAM110C               0.012   hypothetical protein LOC642273 
LTBP2                 0.009   latent transforming growth factor beta binding protei...
TRAF5                 0.009   TNF receptor-associated factor 5 
TRAF5                 0.009   TNF receptor-associated factor 5 
TRAF5                 0.009   TNF receptor-associated factor 5 
DYNC1H1               0.009   cytoplasmic dynein 1 heavy chain 1 
CRTC1                 0.006   mucoepidermoid carcinoma translocated 1 isoform 3 [...
CRTC1                 0.006   mucoepidermoid carcinoma translocated 1 isoform 1 [...
DDHD2                 0.006   DDHD domain containing 2 
CKAP2                 0.006   cytoskeleton associated protein 2 isoform 2 
CKAP2                 0.006   cytoskeleton associated protein 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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