Guide to the Human Genome
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Name: MFAP2 Sequence: fasta or formatted (182aa) NCBI GI: 207028905
Description:

microfibrillar-associated protein 2 isoform b precursor

Referenced in:

Extracellular Matrix

Other entries for this name:
alt mRNA [182aa] microfibrillar-associated protein 2 isoform b precursor
alt prot [183aa] microfibrillar-associated protein 2 isoform a precursor
alt prot [183aa] microfibrillar-associated protein 2 isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         11           2
 C cysteine            7.1         13           1
 D aspartate           5.5         10           1
 E glutamate           7.7         14           2
 F phenylalanine       3.8          7           1
 G glycine             3.8          7           1
 H histidine           2.2          4           1
 I isoleucine          2.7          5           1
 K lysine              2.2          4           1
 L leucine             9.3         17           2
 M methionine          1.1          2           1
 N asparagine          2.2          4           1
 P proline             9.3         17           2
 Q glutamine           8.8         16           3
 R arginine            6.0         11           2
 S serine              6.6         12           2
 T threonine           3.3          6           1
 V valine              6.0         11           1
 W tryptophan          0.0          0           0
 Y tyrosine            6.0         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   microfibrillar-associated protein 2 isoform b precu... 
MFAP2                 1.000   microfibrillar-associated protein 2 isoform b precu...
MFAP2                 0.986   microfibrillar-associated protein 2 isoform a precurs...
MFAP2                 0.986   microfibrillar-associated protein 2 isoform a precurs...
MFAP5                 0.170   microfibrillar associated protein 5 
SHROOM4               0.030   shroom family member 4 
SNED1                 0.027   6720455I24Rik homolog 
GLTSCR1               0.022   glioma tumor suppressor candidate region gene 1 [Ho...
KCNN3                 0.022   small conductance calcium-activated potassium chann...
ARID1B                0.019   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.019   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
HELZ                  0.019   helicase with zinc finger domain 
FBLIM1                0.019   filamin-binding LIM protein-1 isoform b 
FBLIM1                0.019   filamin-binding LIM protein-1 isoform a 
ZNF853                0.016   zinc finger protein 853 
MEF2A                 0.016   myocyte enhancer factor 2A isoform 4 
MEF2A                 0.016   myocyte enhancer factor 2A isoform 3 
MEF2A                 0.016   myocyte enhancer factor 2A isoform 2 
MEF2A                 0.016   myocyte enhancer factor 2A isoform 1 
AEBP1                 0.016   adipocyte enhancer binding protein 1 precursor [Homo...
PCLO                  0.016   piccolo isoform 2 
PCLO                  0.016   piccolo isoform 1 
VWA2                  0.016   von Willebrand factor A domain containing 2 
TANC1                 0.014   tetratricopeptide repeat, ankyrin repeat and coiled...
HTT                   0.014   huntingtin 
SATB1                 0.014   special AT-rich sequence binding protein 1 
SATB1                 0.014   special AT-rich sequence binding protein 1 
PAXIP1                0.014   PAX interacting protein 1 
ECM1                  0.014   extracellular matrix protein 1 isoform 2 precursor ...
ECM1                  0.014   extracellular matrix protein 1 isoform 1 precursor ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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