Search of human proteins with 207028673

Search of human proteins with 207028673

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|207028673 hypothetical protein LOC100134257 [Homo sapiens]
         (139 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|207028673 hypothetical protein LOC100134257 [Homo sapiens]         285   8e-78
gi|45446745 aldo-keto reductase family 1, member C2 [Homo sapiens]    251   2e-67
gi|4503285 aldo-keto reductase family 1, member C2 [Homo sapiens]     251   2e-67
gi|5453543 aldo-keto reductase family 1, member C1 [Homo sapiens]     243   4e-65
gi|24497583 aldo-keto reductase family 1, member C3 [Homo sapiens]    222   7e-59
gi|24497585 aldo-keto reductase family 1, member C4 [Homo sapiens]    202   5e-53
gi|5174695 aldo-keto reductase family 1, member D1 [Homo sapiens]     141   2e-34
gi|4502049 aldo-keto reductase family 1, member B1 [Homo sapiens]     119   6e-28
gi|223468663 aldo-keto reductase family 1, member B10 [Homo sapi...   114   3e-26
gi|24497577 aldo-keto reductase family 1, member A1 [Homo sapiens]    108   2e-24
gi|5174391 aldo-keto reductase family 1, member A1 [Homo sapiens]     108   2e-24
gi|93277124 aldo-keto reductase family 1, member C-like 2 [Homo ...   105   1e-23
gi|122937516 aldo-keto reductase family 1, member B10-like [Homo...   100   3e-22
gi|223718708 aflatoxin B1 aldehyde reductase 3 isoform 2 [Homo s...    45   2e-05
gi|223718702 aflatoxin B1 aldehyde reductase 3 isoform 1 [Homo s...    45   2e-05
gi|41152114 aldo-keto reductase family 7, member A3 [Homo sapiens]     44   4e-05
gi|41327764 aldo-keto reductase family 7, member A2 [Homo sapiens]     40   5e-04
gi|27436964 potassium voltage-gated channel, shaker-related subf...    35   0.020
gi|27436962 potassium voltage-gated channel, shaker-related subf...    35   0.020
gi|27436966 potassium voltage-gated channel, shaker-related subf...    35   0.020
gi|4504825 potassium voltage-gated channel, shaker-related subfa...    34   0.034
gi|27436969 potassium voltage-gated channel, shaker-related subf...    34   0.034
gi|27436971 potassium voltage-gated channel, shaker-related subf...    33   0.098
gi|31377562 HAUS augmin-like complex, subunit 6 [Homo sapiens]         28   1.8  
gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens]                    28   2.4  
gi|109826564 neurofibromin isoform 1 [Homo sapiens]                    28   3.1  
gi|4557793 neurofibromin isoform 2 [Homo sapiens]                      28   3.1  
gi|189458804 neurofibromin isoform 3 [Homo sapiens]                    28   3.1  
gi|188497642 ARHGAP15 [Homo sapiens]                                   28   3.1  
gi|238859597 RNA binding motif protein 34 isoform 1 [Homo sapiens]     27   4.1  

>gi|207028673 hypothetical protein LOC100134257 [Homo sapiens]
          Length = 139

 Score =  285 bits (729), Expect = 8e-78
 Identities = 139/139 (100%), Positives = 139/139 (100%)

Query: 1   MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQ 60
           MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQ
Sbjct: 1   MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQ 60

Query: 61  VGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPV 120
           VGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPV
Sbjct: 61  VGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPV 120

Query: 121 SVKEDIGILTWKKSPKHNS 139
           SVKEDIGILTWKKSPKHNS
Sbjct: 121 SVKEDIGILTWKKSPKHNS 139


>gi|45446745 aldo-keto reductase family 1, member C2 [Homo sapiens]
          Length = 323

 Score =  251 bits (640), Expect = 2e-67
 Identities = 123/123 (100%), Positives = 123/123 (100%)

Query: 1   MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQ 60
           MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQ
Sbjct: 1   MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQ 60

Query: 61  VGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPV 120
           VGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPV
Sbjct: 61  VGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPV 120

Query: 121 SVK 123
           SVK
Sbjct: 121 SVK 123


>gi|4503285 aldo-keto reductase family 1, member C2 [Homo sapiens]
          Length = 323

 Score =  251 bits (640), Expect = 2e-67
 Identities = 123/123 (100%), Positives = 123/123 (100%)

Query: 1   MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQ 60
           MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQ
Sbjct: 1   MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQ 60

Query: 61  VGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPV 120
           VGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPV
Sbjct: 61  VGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPV 120

Query: 121 SVK 123
           SVK
Sbjct: 121 SVK 123


>gi|5453543 aldo-keto reductase family 1, member C1 [Homo sapiens]
          Length = 323

 Score =  243 bits (620), Expect = 4e-65
 Identities = 119/123 (96%), Positives = 120/123 (97%)

Query: 1   MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQ 60
           MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEA KLAIEAGF HIDSAH+YNNEEQ
Sbjct: 1   MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQ 60

Query: 61  VGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPV 120
           VGLAIRSKIADGSVKREDIFYTSKLW NSHRPELVRPALERSLKNLQLDYVDLYLIHFPV
Sbjct: 61  VGLAIRSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLIHFPV 120

Query: 121 SVK 123
           SVK
Sbjct: 121 SVK 123


>gi|24497583 aldo-keto reductase family 1, member C3 [Homo sapiens]
          Length = 323

 Score =  222 bits (566), Expect = 7e-59
 Identities = 108/123 (87%), Positives = 113/123 (91%)

Query: 1   MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQ 60
           MDSK+QCVKLNDGHFMPVLGFGTYAP EVP+SKALE  KLAIEAGF HIDSAH+YNNEEQ
Sbjct: 1   MDSKHQCVKLNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQ 60

Query: 61  VGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPV 120
           VGLAIRSKIADGSVKREDIFYTSKLWS  HRPELVRPALE SLK  QLDYVDLYLIH P+
Sbjct: 61  VGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPM 120

Query: 121 SVK 123
           S+K
Sbjct: 121 SLK 123


>gi|24497585 aldo-keto reductase family 1, member C4 [Homo sapiens]
          Length = 323

 Score =  202 bits (515), Expect = 5e-53
 Identities = 96/123 (78%), Positives = 111/123 (90%)

Query: 1   MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQ 60
           MD KYQ V+LNDGHFMPVLGFGTYAP EVP+++A+E  KLAIEAGF HIDSA++YNNEEQ
Sbjct: 1   MDPKYQRVELNDGHFMPVLGFGTYAPPEVPRNRAVEVTKLAIEAGFRHIDSAYLYNNEEQ 60

Query: 61  VGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPV 120
           VGLAIRSKIADGSVKREDIFYTSKLW    +P++V+PALE SLK LQLDYVDLYL+HFP+
Sbjct: 61  VGLAIRSKIADGSVKREDIFYTSKLWCTFFQPQMVQPALESSLKKLQLDYVDLYLLHFPM 120

Query: 121 SVK 123
           ++K
Sbjct: 121 ALK 123


>gi|5174695 aldo-keto reductase family 1, member D1 [Homo sapiens]
          Length = 326

 Score =  141 bits (355), Expect = 2e-34
 Identities = 64/117 (54%), Positives = 88/117 (75%), Gaps = 1/117 (0%)

Query: 8   VKLNDGHFMPVLGFGTYA-PAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIR 66
           + L+DG+ +P++G GTY+ P   PK     +VK+AI+ G+ HID A++Y NE +VG AIR
Sbjct: 10  IPLSDGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIR 69

Query: 67  SKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVK 123
            KIA+G V+REDIFY  KLW+ +H PE+VRP LER+L+ LQLDYVDLY+I  P++ K
Sbjct: 70  EKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFK 126


>gi|4502049 aldo-keto reductase family 1, member B1 [Homo sapiens]
          Length = 316

 Score =  119 bits (299), Expect = 6e-28
 Identities = 57/114 (50%), Positives = 80/114 (70%), Gaps = 3/114 (2%)

Query: 10  LNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKI 69
           LN+G  MP+LG GT+   + P  +  EAVK+AI+ G+ HID AHVY NE +VG+AI+ K+
Sbjct: 7   LNNGAKMPILGLGTW---KSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKL 63

Query: 70  ADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVK 123
            +  VKRE++F  SKLW   H   LV+ A +++L +L+LDY+DLYLIH+P   K
Sbjct: 64  REQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFK 117


>gi|223468663 aldo-keto reductase family 1, member B10 [Homo
           sapiens]
          Length = 316

 Score =  114 bits (284), Expect = 3e-26
 Identities = 58/116 (50%), Positives = 80/116 (68%), Gaps = 3/116 (2%)

Query: 8   VKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRS 67
           V+L+    MP++G GT+   + P  K  EAVK+AI+AG+ HID A+VY NE +VG AI+ 
Sbjct: 5   VELSTKAKMPIVGLGTW---KSPLGKVKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQE 61

Query: 68  KIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVK 123
           KI + +VKRED+F  SKLW       LVR A E++LK+L+L Y+D+YLIH+P   K
Sbjct: 62  KIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFK 117


>gi|24497577 aldo-keto reductase family 1, member A1 [Homo sapiens]
          Length = 325

 Score =  108 bits (269), Expect = 2e-24
 Identities = 54/114 (47%), Positives = 79/114 (69%), Gaps = 4/114 (3%)

Query: 7   CVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIR 66
           CV L+ G  MP++G GT+  +E  + KA  AVK A+  G+ HID A +Y NE ++G A++
Sbjct: 5   CVLLHTGQKMPLIGLGTWK-SEPGQVKA--AVKYALSVGYRHIDCAAIYGNEPEIGEALK 61

Query: 67  SKIADG-SVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFP 119
             +  G +V RE++F TSKLW+  H PE V PAL ++L +LQL+Y+DLYL+H+P
Sbjct: 62  EDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWP 115


>gi|5174391 aldo-keto reductase family 1, member A1 [Homo sapiens]
          Length = 325

 Score =  108 bits (269), Expect = 2e-24
 Identities = 54/114 (47%), Positives = 79/114 (69%), Gaps = 4/114 (3%)

Query: 7   CVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIR 66
           CV L+ G  MP++G GT+  +E  + KA  AVK A+  G+ HID A +Y NE ++G A++
Sbjct: 5   CVLLHTGQKMPLIGLGTWK-SEPGQVKA--AVKYALSVGYRHIDCAAIYGNEPEIGEALK 61

Query: 67  SKIADG-SVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFP 119
             +  G +V RE++F TSKLW+  H PE V PAL ++L +LQL+Y+DLYL+H+P
Sbjct: 62  EDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWP 115


>gi|93277124 aldo-keto reductase family 1, member C-like 2 [Homo
           sapiens]
          Length = 320

 Score =  105 bits (262), Expect = 1e-23
 Identities = 50/108 (46%), Positives = 72/108 (66%), Gaps = 3/108 (2%)

Query: 16  MPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSVK 75
           +P +G  ++   +    K  EAVK AI+AG+ H D A+ Y+NE +VG  IR KI +G+V+
Sbjct: 4   IPAVGLSSW---KASPGKVTEAVKEAIDAGYRHFDCAYFYHNEREVGAGIRCKIKEGAVR 60

Query: 76  REDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVK 123
           RED+F  +KLW   H+  LV  A  +SLK L+L+Y+DLYLIH+P+  K
Sbjct: 61  REDLFIATKLWCTCHKKSLVETACRKSLKALKLNYLDLYLIHWPMGFK 108


>gi|122937516 aldo-keto reductase family 1, member B10-like [Homo
           sapiens]
          Length = 316

 Score =  100 bits (250), Expect = 3e-22
 Identities = 52/116 (44%), Positives = 75/116 (64%), Gaps = 3/116 (2%)

Query: 8   VKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRS 67
           V+L+    MP++G GT+        K  EAVK+AI+A + HID A+ Y N+ +VG AI+ 
Sbjct: 5   VELSTKAKMPIVGLGTWRSL---LGKVKEAVKVAIDAEYRHIDCAYFYENQHEVGEAIQE 61

Query: 68  KIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVK 123
           KI + +V RED+F  SK+W       LVR A E++LK+L+L Y+D+YLIH+P   K
Sbjct: 62  KIQEKAVMREDLFIVSKVWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFK 117


>gi|223718708 aflatoxin B1 aldehyde reductase 3 isoform 2 [Homo
           sapiens]
          Length = 249

 Score = 45.1 bits (105), Expect = 2e-05
 Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 10/97 (10%)

Query: 28  EVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQV----GLAIRSKIADGSVKREDIFYTS 83
           + P S A+   +  +E G   ID+A +Y++ +      GL +R   +D  VK   I   +
Sbjct: 24  DAPTSAAV--TRAFLERGHTEIDTAFLYSDGQSETILGGLGLRMGSSDCRVK---IATKA 78

Query: 84  KLW-SNSHRPELVRPALERSLKNLQLDYVDLYLIHFP 119
             W  NS +P+ VR  LE SLK LQ   VDL+ +H P
Sbjct: 79  NPWIGNSLKPDSVRSQLETSLKRLQCPUVDLFYLHAP 115


>gi|223718702 aflatoxin B1 aldehyde reductase 3 isoform 1 [Homo
           sapiens]
          Length = 331

 Score = 45.1 bits (105), Expect = 2e-05
 Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 10/97 (10%)

Query: 28  EVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQV----GLAIRSKIADGSVKREDIFYTS 83
           + P S A+   +  +E G   ID+A +Y++ +      GL +R   +D  VK   I   +
Sbjct: 24  DAPTSAAV--TRAFLERGHTEIDTAFLYSDGQSETILGGLGLRMGSSDCRVK---IATKA 78

Query: 84  KLW-SNSHRPELVRPALERSLKNLQLDYVDLYLIHFP 119
             W  NS +P+ VR  LE SLK LQ   VDL+ +H P
Sbjct: 79  NPWIGNSLKPDSVRSQLETSLKRLQCPUVDLFYLHAP 115


>gi|41152114 aldo-keto reductase family 7, member A3 [Homo sapiens]
          Length = 331

 Score = 43.9 bits (102), Expect = 4e-05
 Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 8/96 (8%)

Query: 28  EVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQV----GLAIRSKIADGSVKREDIFYTS 83
           + P S A+   +  +E G   ID+A VY+  +      GL +R   +D  VK +      
Sbjct: 24  DAPTSAAV--TRAFLERGHTEIDTAFVYSEGQSETILGGLGLRLGGSDCRVKIDT--KAI 79

Query: 84  KLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFP 119
            L+ NS +P+ +R  LE SLK LQ   VDL+ +H P
Sbjct: 80  PLFGNSLKPDSLRFQLETSLKRLQCPRVDLFYLHMP 115


>gi|41327764 aldo-keto reductase family 7, member A2 [Homo sapiens]
          Length = 359

 Score = 40.4 bits (93), Expect = 5e-04
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 10/97 (10%)

Query: 28  EVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQV----GLAIRSKIADGSVKREDIFYTS 83
           + P S A  AV+  +E G   +D+A +Y++ +      GL +     D  VK   I   +
Sbjct: 52  DAPASAA--AVRAFLERGHTELDTAFMYSDGQSETILGGLGLGLGGGDCRVK---IATKA 106

Query: 84  KLWSN-SHRPELVRPALERSLKNLQLDYVDLYLIHFP 119
             W   S +P+ VR  LE SLK LQ   VDL+ +H P
Sbjct: 107 NPWDGKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAP 143


>gi|27436964 potassium voltage-gated channel, shaker-related
           subfamily, beta member 1 isoform 3 [Homo sapiens]
          Length = 401

 Score = 35.0 bits (79), Expect = 0.020
 Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 16/115 (13%)

Query: 19  LGFGTYAP--AEVPKSKALEAVKLAIEAGFHHIDSAHVY---NNEEQVGLAIRSKIADGS 73
           LG GT+     ++    A   + +A E+G +  D+A VY     E  +G  I+ K     
Sbjct: 86  LGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKK----G 141

Query: 74  VKREDIFYTSKL-WSNSHRPEL------VRPALERSLKNLQLDYVDLYLIHFPVS 121
            +R  +  T+KL W      E       +   L+ SL+ LQL+YVD+   + P S
Sbjct: 142 WRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDS 196


>gi|27436962 potassium voltage-gated channel, shaker-related
           subfamily, beta member 1 isoform 2 [Homo sapiens]
          Length = 408

 Score = 35.0 bits (79), Expect = 0.020
 Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 16/115 (13%)

Query: 19  LGFGTYAP--AEVPKSKALEAVKLAIEAGFHHIDSAHVY---NNEEQVGLAIRSKIADGS 73
           LG GT+     ++    A   + +A E+G +  D+A VY     E  +G  I+ K     
Sbjct: 93  LGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKK----G 148

Query: 74  VKREDIFYTSKL-WSNSHRPEL------VRPALERSLKNLQLDYVDLYLIHFPVS 121
            +R  +  T+KL W      E       +   L+ SL+ LQL+YVD+   + P S
Sbjct: 149 WRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDS 203


>gi|27436966 potassium voltage-gated channel, shaker-related
           subfamily, beta member 1 isoform 1 [Homo sapiens]
          Length = 419

 Score = 35.0 bits (79), Expect = 0.020
 Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 16/115 (13%)

Query: 19  LGFGTYAP--AEVPKSKALEAVKLAIEAGFHHIDSAHVY---NNEEQVGLAIRSKIADGS 73
           LG GT+     ++    A   + +A E+G +  D+A VY     E  +G  I+ K     
Sbjct: 104 LGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKK----G 159

Query: 74  VKREDIFYTSKL-WSNSHRPEL------VRPALERSLKNLQLDYVDLYLIHFPVS 121
            +R  +  T+KL W      E       +   L+ SL+ LQL+YVD+   + P S
Sbjct: 160 WRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDS 214


>gi|4504825 potassium voltage-gated channel, shaker-related
           subfamily, beta member 2 isoform 1 [Homo sapiens]
          Length = 367

 Score = 34.3 bits (77), Expect = 0.034
 Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 16/113 (14%)

Query: 19  LGFGTYAP--AEVPKSKALEAVKLAIEAGFHHIDSAHVY---NNEEQVGLAIRSKIADGS 73
           LG GT+     ++    A + + LA + G +  D+A VY     E  +G  I+ K     
Sbjct: 52  LGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKK----G 107

Query: 74  VKREDIFYTSKL-WSNSHRPEL------VRPALERSLKNLQLDYVDLYLIHFP 119
            +R  +  T+K+ W      E       +   L+ SL+ LQL+YVD+   + P
Sbjct: 108 WRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRP 160


>gi|27436969 potassium voltage-gated channel, shaker-related
           subfamily, beta member 2 isoform 2 [Homo sapiens]
          Length = 353

 Score = 34.3 bits (77), Expect = 0.034
 Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 16/113 (14%)

Query: 19  LGFGTYAP--AEVPKSKALEAVKLAIEAGFHHIDSAHVY---NNEEQVGLAIRSKIADGS 73
           LG GT+     ++    A + + LA + G +  D+A VY     E  +G  I+ K     
Sbjct: 38  LGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKK----G 93

Query: 74  VKREDIFYTSKL-WSNSHRPEL------VRPALERSLKNLQLDYVDLYLIHFP 119
            +R  +  T+K+ W      E       +   L+ SL+ LQL+YVD+   + P
Sbjct: 94  WRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRP 146


>gi|27436971 potassium voltage-gated channel, shaker-related
           subfamily, beta member 3 [Homo sapiens]
          Length = 404

 Score = 32.7 bits (73), Expect = 0.098
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 16/107 (14%)

Query: 19  LGFGTYAP--AEVPKSKALEAVKLAIEAGFHHIDSAHVY---NNEEQVGLAIRSKIADGS 73
           LG GT+    +++    A + + +A E G +  D+A VY     E  +G  ++SK     
Sbjct: 93  LGLGTWVTFGSQISDETAEDVLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSK----G 148

Query: 74  VKREDIFYTSKL-WSNSHRPEL------VRPALERSLKNLQLDYVDL 113
            +R     T+K+ W      E       +   L  SL+ LQL YVD+
Sbjct: 149 WRRSSYVITTKIFWGGQAETERGLSRKHIIEGLRGSLERLQLGYVDI 195


>gi|31377562 HAUS augmin-like complex, subunit 6 [Homo sapiens]
          Length = 955

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 12/62 (19%)

Query: 73  SVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQ-------LDYVDLYLIHFPVSVKED 125
           S KRE+ +      SNS  PE  +P L  + +N+Q       LD  DL+  H   S++  
Sbjct: 845 SKKREESYL-----SNSQTPERHKPELSPTPQNVQTDDTLNFLDTCDLHTEHIKPSLRTS 899

Query: 126 IG 127
           IG
Sbjct: 900 IG 901


>gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens]
          Length = 1163

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 13/65 (20%)

Query: 66  RSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKED 125
           R+ +   SV+ ED F+  +++S     EL+ P  E   +             +P+ VK D
Sbjct: 673 RTPVKPSSVEEEDSFFRQRMFSPMEEKELLSPLSEPDDR-------------YPLIVKID 719

Query: 126 IGILT 130
           + +LT
Sbjct: 720 LNLLT 724


>gi|109826564 neurofibromin isoform 1 [Homo sapiens]
          Length = 2839

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 84  KLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPV 120
           +L   SH PE+ + A+E  L   QLD +DL+    PV
Sbjct: 531 QLVPQSHMPEIAQEAMEALLVLHQLDSIDLWNPDAPV 567


>gi|4557793 neurofibromin isoform 2 [Homo sapiens]
          Length = 2818

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 84  KLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPV 120
           +L   SH PE+ + A+E  L   QLD +DL+    PV
Sbjct: 531 QLVPQSHMPEIAQEAMEALLVLHQLDSIDLWNPDAPV 567


>gi|189458804 neurofibromin isoform 3 [Homo sapiens]
          Length = 593

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 84  KLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPV 120
           +L   SH PE+ + A+E  L   QLD +DL+    PV
Sbjct: 531 QLVPQSHMPEIAQEAMEALLVLHQLDSIDLWNPDAPV 567


>gi|188497642 ARHGAP15 [Homo sapiens]
          Length = 475

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 15/49 (30%), Positives = 28/49 (57%)

Query: 59  EQVGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQ 107
           E+ G   ++KIADG  K    + TS +  +S R E  + + +++L N++
Sbjct: 81  EKEGYLQKAKIADGGKKLRKNWSTSWIVLSSRRIEFYKESKQQALSNMK 129


>gi|238859597 RNA binding motif protein 34 isoform 1 [Homo sapiens]
          Length = 430

 Score = 27.3 bits (59), Expect = 4.1
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 21  FGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIR---SKIADGSVKRE 77
           F +  PAE   SK L A+K  I     +I++  V+  E     A++   ++IADG   R 
Sbjct: 216 FRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIADGFRIRV 275

Query: 78  DI 79
           D+
Sbjct: 276 DL 277


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,272,679
Number of Sequences: 37866
Number of extensions: 197581
Number of successful extensions: 384
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 350
Number of HSP's gapped (non-prelim): 39
length of query: 139
length of database: 18,247,518
effective HSP length: 92
effective length of query: 47
effective length of database: 14,763,846
effective search space: 693900762
effective search space used: 693900762
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.