Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SEPT12 Sequence: fasta or formatted (312aa) NCBI GI: 226492499
Description:

septin 12 isoform 1

Referenced in:

Additional Cell Cycle Functions

Other entries for this name:
alt prot [358aa] septin 12 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         11           1
 C cysteine            2.9          9           1
 D aspartate           6.4         20           2
 E glutamate           5.4         17           2
 F phenylalanine       3.5         11           1
 G glycine             6.1         19           1
 H histidine           3.2         10           1
 I isoleucine          5.8         18           2
 K lysine              5.1         16           1
 L leucine            10.9         34           2
 M methionine          2.9          9           1
 N asparagine          5.1         16           2
 P proline             7.4         23           2
 Q glutamine           4.2         13           2
 R arginine            7.1         22           3
 S serine              5.8         18           2
 T threonine           5.4         17           2
 V valine              7.4         23           2
 W tryptophan          1.0          3           1
 Y tyrosine            1.0          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   septin 12 isoform 1 
SEPT12                0.964   septin 12 isoform 2 
SEPT9                 0.453   septin 9 isoform f 
SEPT9                 0.453   septin 9 isoform d 
SEPT9                 0.453   septin 9 isoform e 
SEPT9                 0.453   septin 9 isoform b 
SEPT9                 0.453   septin 9 isoform e 
SEPT9                 0.453   septin 9 isoform a 
SEPT9                 0.453   septin 9 isoform c 
SEPT3                 0.448   septin 3 isoform A 
SEPT3                 0.442   septin 3 isoform B 
SEPT7                 0.311   cell division cycle 10 isoform 1 
SEPT7                 0.311   cell division cycle 10 isoform 2 
SEPT4                 0.285   septin 4 isoform 1 
SEPT4                 0.285   septin 4 isoform 3 
SEPT2                 0.272   septin 2 
SEPT2                 0.272   septin 2 
SEPT2                 0.272   septin 2 
SEPT2                 0.272   septin 2 
SEPT5                 0.267   septin 5 
SEPT1                 0.256   septin 1 
SEPT6                 0.228   septin 6 isoform B 
SEPT6                 0.228   septin 6 isoform D 
SEPT6                 0.228   septin 6 isoform A 
SEPT6                 0.228   septin 6 isoform A 
SEPT11                0.228   septin 11 
SEPT8                 0.222   septin 8 isoform c 
SEPT8                 0.222   septin 8 isoform a 
SEPT8                 0.222   septin 8 isoform b 
SEPT10                0.218   septin 10 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press