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Search of human proteins with 205277449
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|205277449 single Ig IL-1R-related molecule [Homo sapiens]
(410 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|205277451 single Ig IL-1R-related molecule [Homo sapiens] 831 0.0
gi|205277449 single Ig IL-1R-related molecule [Homo sapiens] 831 0.0
gi|205277445 single Ig IL-1R-related molecule [Homo sapiens] 831 0.0
gi|239749936 PREDICTED: similar to single Ig IL-1R-related molec... 413 e-115
gi|11225607 interleukin 1 receptor accessory protein-like 2 [Hom... 96 6e-20
gi|7657232 interleukin 1 receptor accessory protein-like 1 precu... 89 6e-18
gi|4504661 interleukin 1 receptor accessory protein isoform 1 [H... 85 1e-16
gi|4504655 interleukin 18 receptor 1 precursor [Homo sapiens] 79 1e-14
gi|27894324 interleukin 1 receptor-like 1 isoform 1 precursor [H... 70 3e-12
gi|28416902 interleukin 1 receptor-like 2 precursor [Homo sapiens] 69 8e-12
gi|4504659 interleukin 1 receptor, type I precursor [Homo sapiens] 69 1e-11
gi|4504657 interleukin 18 receptor accessory protein precursor [... 68 1e-11
gi|19718734 toll-like receptor 2 [Homo sapiens] 47 4e-05
gi|197276654 myeloid differentiation primary response gene 88 [H... 45 2e-04
gi|19924149 toll-like receptor 4 precursor [Homo sapiens] 44 3e-04
gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens] 39 0.009
gi|4503173 coxsackie virus and adenovirus receptor precursor [Ho... 38 0.015
gi|20143971 toll-like receptor 6 [Homo sapiens] 37 0.025
gi|41350337 toll-like receptor 1 [Homo sapiens] 37 0.025
gi|16751843 toll-like receptor 5 [Homo sapiens] 37 0.032
gi|62865621 toll-like receptor 10 precursor [Homo sapiens] 35 0.12
gi|62865618 toll-like receptor 10 precursor [Homo sapiens] 35 0.12
gi|58331253 obscurin, cytoskeletal calmodulin and titin-interact... 35 0.12
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 35 0.12
gi|61742797 basal cell adhesion molecule isoform 2 precursor [Ho... 34 0.27
gi|31543106 basal cell adhesion molecule isoform 1 precursor [Ho... 34 0.27
gi|118572606 hemicentin 1 [Homo sapiens] 34 0.27
gi|134244585 putative neuronal cell adhesion molecule [Homo sapi... 34 0.27
gi|110349719 titin isoform N2-A [Homo sapiens] 33 0.61
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 32 1.0
>gi|205277451 single Ig IL-1R-related molecule [Homo sapiens]
Length = 410
Score = 831 bits (2147), Expect = 0.0
Identities = 410/410 (100%), Positives = 410/410 (100%)
Query: 1 MPGVCDRAPDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGG 60
MPGVCDRAPDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGG
Sbjct: 1 MPGVCDRAPDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGG 60
Query: 61 HYSLHEYSWVKANLSEVLVSSVLGVNVTSTEVYGAFTCSIQNISFSSFTLQRAGPTSHVA 120
HYSLHEYSWVKANLSEVLVSSVLGVNVTSTEVYGAFTCSIQNISFSSFTLQRAGPTSHVA
Sbjct: 61 HYSLHEYSWVKANLSEVLVSSVLGVNVTSTEVYGAFTCSIQNISFSSFTLQRAGPTSHVA 120
Query: 121 AVLASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEVEINDGKLYDAYVSYSDCPEDRKF 180
AVLASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEVEINDGKLYDAYVSYSDCPEDRKF
Sbjct: 121 AVLASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEVEINDGKLYDAYVSYSDCPEDRKF 180
Query: 181 VNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVLSDAFLSRAWCSH 240
VNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVLSDAFLSRAWCSH
Sbjct: 181 VNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVLSDAFLSRAWCSH 240
Query: 241 SFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLLLWRPGSVTPSSDFW 300
SFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLLLWRPGSVTPSSDFW
Sbjct: 241 SFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLLLWRPGSVTPSSDFW 300
Query: 301 KEVQLALPRKVQYRPVEGDPQTQLQDDKDPMLILRGRVPEGRALDSEVDPDPEGDLGVRG 360
KEVQLALPRKVQYRPVEGDPQTQLQDDKDPMLILRGRVPEGRALDSEVDPDPEGDLGVRG
Sbjct: 301 KEVQLALPRKVQYRPVEGDPQTQLQDDKDPMLILRGRVPEGRALDSEVDPDPEGDLGVRG 360
Query: 361 PVFGEPSAPPHTSGVSLGESRSSEVDVSDLGSRNYSARTDFYCLVSKDDM 410
PVFGEPSAPPHTSGVSLGESRSSEVDVSDLGSRNYSARTDFYCLVSKDDM
Sbjct: 361 PVFGEPSAPPHTSGVSLGESRSSEVDVSDLGSRNYSARTDFYCLVSKDDM 410
>gi|205277449 single Ig IL-1R-related molecule [Homo sapiens]
Length = 410
Score = 831 bits (2147), Expect = 0.0
Identities = 410/410 (100%), Positives = 410/410 (100%)
Query: 1 MPGVCDRAPDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGG 60
MPGVCDRAPDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGG
Sbjct: 1 MPGVCDRAPDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGG 60
Query: 61 HYSLHEYSWVKANLSEVLVSSVLGVNVTSTEVYGAFTCSIQNISFSSFTLQRAGPTSHVA 120
HYSLHEYSWVKANLSEVLVSSVLGVNVTSTEVYGAFTCSIQNISFSSFTLQRAGPTSHVA
Sbjct: 61 HYSLHEYSWVKANLSEVLVSSVLGVNVTSTEVYGAFTCSIQNISFSSFTLQRAGPTSHVA 120
Query: 121 AVLASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEVEINDGKLYDAYVSYSDCPEDRKF 180
AVLASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEVEINDGKLYDAYVSYSDCPEDRKF
Sbjct: 121 AVLASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEVEINDGKLYDAYVSYSDCPEDRKF 180
Query: 181 VNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVLSDAFLSRAWCSH 240
VNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVLSDAFLSRAWCSH
Sbjct: 181 VNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVLSDAFLSRAWCSH 240
Query: 241 SFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLLLWRPGSVTPSSDFW 300
SFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLLLWRPGSVTPSSDFW
Sbjct: 241 SFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLLLWRPGSVTPSSDFW 300
Query: 301 KEVQLALPRKVQYRPVEGDPQTQLQDDKDPMLILRGRVPEGRALDSEVDPDPEGDLGVRG 360
KEVQLALPRKVQYRPVEGDPQTQLQDDKDPMLILRGRVPEGRALDSEVDPDPEGDLGVRG
Sbjct: 301 KEVQLALPRKVQYRPVEGDPQTQLQDDKDPMLILRGRVPEGRALDSEVDPDPEGDLGVRG 360
Query: 361 PVFGEPSAPPHTSGVSLGESRSSEVDVSDLGSRNYSARTDFYCLVSKDDM 410
PVFGEPSAPPHTSGVSLGESRSSEVDVSDLGSRNYSARTDFYCLVSKDDM
Sbjct: 361 PVFGEPSAPPHTSGVSLGESRSSEVDVSDLGSRNYSARTDFYCLVSKDDM 410
>gi|205277445 single Ig IL-1R-related molecule [Homo sapiens]
Length = 410
Score = 831 bits (2147), Expect = 0.0
Identities = 410/410 (100%), Positives = 410/410 (100%)
Query: 1 MPGVCDRAPDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGG 60
MPGVCDRAPDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGG
Sbjct: 1 MPGVCDRAPDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGG 60
Query: 61 HYSLHEYSWVKANLSEVLVSSVLGVNVTSTEVYGAFTCSIQNISFSSFTLQRAGPTSHVA 120
HYSLHEYSWVKANLSEVLVSSVLGVNVTSTEVYGAFTCSIQNISFSSFTLQRAGPTSHVA
Sbjct: 61 HYSLHEYSWVKANLSEVLVSSVLGVNVTSTEVYGAFTCSIQNISFSSFTLQRAGPTSHVA 120
Query: 121 AVLASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEVEINDGKLYDAYVSYSDCPEDRKF 180
AVLASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEVEINDGKLYDAYVSYSDCPEDRKF
Sbjct: 121 AVLASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEVEINDGKLYDAYVSYSDCPEDRKF 180
Query: 181 VNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVLSDAFLSRAWCSH 240
VNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVLSDAFLSRAWCSH
Sbjct: 181 VNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVLSDAFLSRAWCSH 240
Query: 241 SFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLLLWRPGSVTPSSDFW 300
SFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLLLWRPGSVTPSSDFW
Sbjct: 241 SFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLLLWRPGSVTPSSDFW 300
Query: 301 KEVQLALPRKVQYRPVEGDPQTQLQDDKDPMLILRGRVPEGRALDSEVDPDPEGDLGVRG 360
KEVQLALPRKVQYRPVEGDPQTQLQDDKDPMLILRGRVPEGRALDSEVDPDPEGDLGVRG
Sbjct: 301 KEVQLALPRKVQYRPVEGDPQTQLQDDKDPMLILRGRVPEGRALDSEVDPDPEGDLGVRG 360
Query: 361 PVFGEPSAPPHTSGVSLGESRSSEVDVSDLGSRNYSARTDFYCLVSKDDM 410
PVFGEPSAPPHTSGVSLGESRSSEVDVSDLGSRNYSARTDFYCLVSKDDM
Sbjct: 361 PVFGEPSAPPHTSGVSLGESRSSEVDVSDLGSRNYSARTDFYCLVSKDDM 410
>gi|239749936 PREDICTED: similar to single Ig IL-1R-related molecule
[Homo sapiens]
Length = 304
Score = 413 bits (1062), Expect = e-115
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 209 EPSADLLVNLSRCRRLIVVLSDAFLSRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDP 268
EPSADLLVNLSRCRRLIVVLSDAFLSRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDP
Sbjct: 103 EPSADLLVNLSRCRRLIVVLSDAFLSRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDP 162
Query: 269 AHPALRLLRQHRHLVTLLLWRPGSVTPSSDFWKEVQLALPRKVQYRPVEGDPQTQLQDDK 328
AHPALRLLRQHRHLVTLLLWRPGSVTPSSDFWKEVQLALPRKVQYRPVEGDPQTQLQDDK
Sbjct: 163 AHPALRLLRQHRHLVTLLLWRPGSVTPSSDFWKEVQLALPRKVQYRPVEGDPQTQLQDDK 222
Query: 329 DPMLILRGRVPEGRALDSEVDPDPEGDLGVRGPVFGEPSAPPHTSGVSLGESRSSEVDVS 388
DPMLILRGRVPEGRALDSEVDPDPEGDLGVRGPVFGEPSAPPHTSGVSLGESRSSEVDVS
Sbjct: 223 DPMLILRGRVPEGRALDSEVDPDPEGDLGVRGPVFGEPSAPPHTSGVSLGESRSSEVDVS 282
Query: 389 DLGSRNYSARTDFYCLVSKDDM 410
DLGSRNYSARTDFYCLVSKDDM
Sbjct: 283 DLGSRNYSARTDFYCLVSKDDM 304
>gi|11225607 interleukin 1 receptor accessory protein-like 2 [Homo
sapiens]
Length = 686
Score = 95.9 bits (237), Expect = 6e-20
Identities = 91/325 (28%), Positives = 148/325 (45%), Gaps = 22/325 (6%)
Query: 6 DRAPDFLSPSEDQ--VLRPALGSSVALNCTAWV-VSGPHCSLPSVQWLK-DGLPLGIGGH 61
D+ P L P E+Q V+ LG + + C A+ SG S P + W+K + + GH
Sbjct: 237 DKPPKPLFPMENQPSVIDVQLGKPLNIPCKAFFGFSGE--SGPMIYWMKGEKFIEELAGH 294
Query: 62 YSLHEYSWVKANLSEVLVSSVLGVNVTSTEVYGAFTCSIQNIS---FSSFTLQRAGPTSH 118
E +K +L E V L + +TC ++N + +S L++
Sbjct: 295 IREGEIRLLKEHLGEKEVELALIFDSVVEADLANYTCHVENRNGRKHASVLLRKKDLIYK 354
Query: 119 VAAVLASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEVEIND-GKLYDAYVSYS----- 172
+ + L L+L ++Y + ++L+Y+ +G E ND K YDAY+SY+
Sbjct: 355 IELAGGLGAIFLLLVLLVVIYKCYNIELMLFYRQHFGADETNDDNKEYDAYLSYTKVDQD 414
Query: 173 --DC--PEDRKFVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVL 228
DC PE+ +F +L LE+ GYKLF+ +RDL+P DL + + RRLI+VL
Sbjct: 415 TLDCDNPEEEQFALEVLPDVLEKHYGYKLFIPERDLIPSGTYMEDLTRYVEQSRRLIIVL 474
Query: 229 S-DAFLSRAWCSHSFREGLCRLLELTR-RPIFITFEGQRRDPAHPALRLLRQHRHLVTLL 286
+ D L R W L +L + I I + + L++ L++L+
Sbjct: 475 TPDYILRRGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLLSLI 534
Query: 287 LWRPG-SVTPSSDFWKEVQLALPRK 310
W+ S +S FWK + +P K
Sbjct: 535 KWKGSKSSKLNSKFWKHLVYEMPIK 559
>gi|7657232 interleukin 1 receptor accessory protein-like 1
precursor [Homo sapiens]
Length = 696
Score = 89.4 bits (220), Expect = 6e-18
Identities = 88/327 (26%), Positives = 150/327 (45%), Gaps = 25/327 (7%)
Query: 6 DRAPDFLSPSEDQ--VLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGGHYS 63
D+ P L P E + + LG S L C A+ S P + W+K +
Sbjct: 239 DKPPKLLYPMESKLTIQETQLGDSANLTCRAFFGYSGDVS-PLIYWMKGEKFIEDLDENR 297
Query: 64 LHEYSW--VKANLSEVLVSSVLGVNVTSTEVYGAFTCSIQNIS---FSSFTLQRAGP--T 116
+ E +K +L E VS L V+ G ++C ++N + +S L + T
Sbjct: 298 VWESDIRILKEHLGEQEVSISLIVDSVEEGDLGNYSCYVENGNGRRHASVLLHKRELMYT 357
Query: 117 SHVAAVLASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEVEIN-DGKLYDAYVSYS--- 172
+A L ++L+LL L+ +Y ++ ++L+Y++ +G E++ D K YDAY+SY+
Sbjct: 358 VELAGGLGAILLLLVCLVT--IYKCYKIEIMLFYRNHFGAEELDGDNKDYDAYLSYTKVD 415
Query: 173 ------DCPEDRKFVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIV 226
+ E+ +F IL LE+ GYKLF+ DRDL+P D+ + + +RLI+
Sbjct: 416 PDQWNQETGEEERFALEILPDMLEKHYGYKLFIPDRDLIPTGTYIEDVARCVDQSKRLII 475
Query: 227 VLSDAF-LSRAWCSHSFREGLCRLLELTR-RPIFITFEGQRRDPAHPALRLLRQHRHLVT 284
V++ + + R W L +L + I I R + + L+ L+T
Sbjct: 476 VMTPNYVVRRGWSIFELETRLRNMLVTGEIKVILIECSELRGIMNYQEVEALKHTIKLLT 535
Query: 285 LLLWR-PGSVTPSSDFWKEVQLALPRK 310
++ W P +S FWK +Q +P K
Sbjct: 536 VIKWHGPKCNKLNSKFWKRLQYEMPFK 562
>gi|4504661 interleukin 1 receptor accessory protein isoform 1 [Homo
sapiens]
Length = 570
Score = 84.7 bits (208), Expect = 1e-16
Identities = 87/323 (26%), Positives = 150/323 (46%), Gaps = 15/323 (4%)
Query: 9 PDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGL-PLGIGGHYSLHEY 67
P SP++ V G + + CT + S S V W DG P I +++E
Sbjct: 243 PVIHSPNDHVVYEKEPGEELLIPCTVYF-SFLMDSRNEVWWTIDGKKPDDITIDVTINE- 300
Query: 68 SWVKANLSEVLVSSVLGVN-VTSTEVYGAFTCSIQNIS---FSSFTLQRAGPTSHVAAVL 123
S + + + +L + VTS ++ ++ C ++ + +++ P L
Sbjct: 301 SISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKVPAPRYTVEL 360
Query: 124 A---SLLVLLALLLAALLYVKCRLNVLLWYQDAYGEVE-INDGKLYDAYVSYSDCPEDRK 179
A VLL ++L + +V L ++L+Y+ +G E I DGK YD YVSY+ E+ +
Sbjct: 361 ACGFGATVLLVVILIVVYHVYW-LEMVLFYRAHFGTDETILDGKEYDIYVSYARNAEEEE 419
Query: 180 FVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVLSDAFLSRAWCS 239
FV L+ LE GYKL + DRD LP + + L + + RRL+VVLS ++ + +
Sbjct: 420 FVLLTLRGVLENEFGYKLCIFDRDSLPGGIVTDETLSFIQKSRRLLVVLSPNYVLQG--T 477
Query: 240 HSFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLLLWR-PGSVTPSSD 298
+ E L + R Q + ++ L++ + ++T++ W+ S P
Sbjct: 478 QALLELKAGLENMASRGNINVILVQYKAVKETKVKELKRAKTVLTVIKWKGEKSKYPQGR 537
Query: 299 FWKEVQLALPRKVQYRPVEGDPQ 321
FWK++Q+A+P K R D Q
Sbjct: 538 FWKQLQVAMPVKKSPRRSSSDEQ 560
>gi|4504655 interleukin 18 receptor 1 precursor [Homo sapiens]
Length = 541
Score = 78.6 bits (192), Expect = 1e-14
Identities = 90/337 (26%), Positives = 155/337 (45%), Gaps = 42/337 (12%)
Query: 9 PDFLSPSEDQVLRPALGSSVALNCTA---------WVVSGPHCSLPSVQWLKDGLPLGIG 59
P L P + V LG +V LNC+A W+ + S P++ K+ +
Sbjct: 215 PVLLGPKLNHVA-VELGKNVRLNCSALLNEEDVIYWMFGEENGSDPNIHEEKEMRIMTPE 273
Query: 60 GHYSLHEYSWVKANLSEVLVSSVLGVNVTSTEVYGAFTCSIQNISFSSFTLQRAGPTSHV 119
G K + S+VL +G + + +Y S SF L R + +
Sbjct: 274 G----------KWHASKVLRIENIGESNLNV-LYNCTVASTGGTDTKSFILVRKADMADI 322
Query: 120 AA------VLASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEVE-INDGKLYDAYVSY- 171
++ ++L+L+A++ + V R++++L+Y+ E + DGK YDA+VSY
Sbjct: 323 PGHVFTRGMIIAVLILVAVVCLVTVCVIYRVDLVLFYRHLTRRDETLTDGKTYDAFVSYL 382
Query: 172 SDCP----EDRKFVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVV 227
+C E+ F IL LE+ GYKL + +RD++P ++ + + RRLI+V
Sbjct: 383 KECRPENGEEHTFAVEILPRVLEKHFGYKLCIFERDVVPGGAVVDEIHSLIEKSRRLIIV 442
Query: 228 LSDAFLSRAWCSHSFREGLCR-LLELTRRPIFITFEGQRRDPAHP-ALRLLRQHRHLVTL 285
LS +++S + GL L+E + I I F P +L+LL+ HR +
Sbjct: 443 LSKSYMSNE-VRYELESGLHEALVERKIKIILIEFTPVTDFTFLPQSLKLLKSHR----V 497
Query: 286 LLWRPG-SVTPSSDFWKEVQLALPRKVQYRPVEGDPQ 321
L W+ S++ +S FWK + +P K +P +P+
Sbjct: 498 LKWKADKSLSYNSRFWKNLLYLMPAKT-VKPGRDEPE 533
>gi|27894324 interleukin 1 receptor-like 1 isoform 1 precursor [Homo
sapiens]
Length = 556
Score = 70.1 bits (170), Expect = 3e-12
Identities = 77/326 (23%), Positives = 131/326 (40%), Gaps = 35/326 (10%)
Query: 13 SPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGGHYSLHEYSWVKA 72
+P+++++ +G + L C+A G L +V W +G + G + +
Sbjct: 216 APAQNEIKEVEIGKNANLTCSACFGKGTQF-LAAVLWQLNGTKITDFGEPRIQQEEGQNQ 274
Query: 73 NLSEVLVSSVLGVNVTSTEV------YGAFTCSIQNISFSSFTLQRAGPTSH-----VAA 121
+ S L + + + + Y ++ + + L R P H + A
Sbjct: 275 SFSNGLACLDMVLRIADVKEEDLLLQYDCLALNLHGLRRHTVRLSRKNPIDHHSIYCIIA 334
Query: 122 VLASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEVEINDGKLYDAYVSYSDCPEDRK-- 179
V + L+L+ +L+ L LLW A NDGKLYDAYV Y P + K
Sbjct: 335 VCSVFLMLINVLVIILKMFWIEAT-LLWRDIAKPYKTRNDGKLYDAYVVY---PRNYKSS 390
Query: 180 ---------FVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVLSD 230
FV+ IL LE + GY L + RD+LP + + N+ + RR I +L+
Sbjct: 391 TDGASRVEHFVHQILPDVLENKCGYTLCIYGRDMLPGEDVVTAVETNIRKSRRHIFILTP 450
Query: 231 AFLSRAWCSHSFREGL-CRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTL---L 286
++ L C L++ + I I E A L +HL+ + +
Sbjct: 451 QITHNKEFAYEQEVALHCALIQNDAKVILIEMEALSELDMLQAEALQDSLQHLMKVQGTI 510
Query: 287 LWRPGSV----TPSSDFWKEVQLALP 308
WR + + +S FWK V+ +P
Sbjct: 511 KWREDHIANKRSLNSKFWKHVRYQMP 536
>gi|28416902 interleukin 1 receptor-like 2 precursor [Homo sapiens]
Length = 575
Score = 68.9 bits (167), Expect = 8e-12
Identities = 53/156 (33%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 85 VNVTSTEV----YGAFTCSIQNISFSSFTLQRAGPTSHVAAVLASLLVLLALLLAAL-LY 139
VN+T EV YG +S + LQ P A ++ L+ L+A+ ++ + +Y
Sbjct: 298 VNITFLEVKMEDYGLPFMCHAGVSTAYIILQLPAPDFR-AYLIGGLIALVAVAVSVVYIY 356
Query: 140 VKCRLNVLLWYQDAYGEVE-INDGKLYDAYVSYSDCPEDRK------FVNFILKPQLERR 192
+++++LWY+ A+ E I DGKLYDAYV Y ++ + V IL LER+
Sbjct: 357 NIFKIDIVLWYRSAFHSTETIVDGKLYDAYVLYPKPHKESQRHAVDALVLNILPEVLERQ 416
Query: 193 RGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVL 228
GYKLF+ RD P + + N+ CRRLIV++
Sbjct: 417 CGYKLFIFGRDEFPGQAVANVIDENVKLCRRLIVIV 452
>gi|4504659 interleukin 1 receptor, type I precursor [Homo sapiens]
Length = 569
Score = 68.6 bits (166), Expect = 1e-11
Identities = 75/325 (23%), Positives = 145/325 (44%), Gaps = 36/325 (11%)
Query: 9 PDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQW----LKDGLPLGIGGHYSL 64
P +SP+ ++ + LGS + L C V+G + +W + + P+ +YS+
Sbjct: 226 PVIVSPA-NETMEVDLGSQIQLICN---VTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSV 281
Query: 65 HEYSWVKANLSEVLVSSVLGVNVTSTEVYG-AFTCSIQNI-SFSSFTLQRAGPTSHVAAV 122
AN + +VL ++ + Y FTC +N + +Q P ++
Sbjct: 282 EN----PANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKH 337
Query: 123 LASLLVLLALLL--AALLYVKCRLNVLLWYQDA---YGEVEINDGKLYDAYVSY------ 171
+ + V L +++ + +Y +++++LWY+D+ + ++ +DGK YDAY+ Y
Sbjct: 338 MIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGE 397
Query: 172 ---SDCPEDRKFVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVL 228
SDC FV +L LE++ GYKLF+ RD + + N+ + RRLI++L
Sbjct: 398 GSTSDCDI---FVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIIL 454
Query: 229 SDAFLSRAWCSHSFREGLCRLLELTRRPIFITF----EGQRRDPAHPALRLLRQ-HRHLV 283
+W S E + L + I + + Q + +++ ++Q H +
Sbjct: 455 VRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIR 514
Query: 284 TLLLWRPGSVTPSSDFWKEVQLALP 308
+ G + + FWK V+ +P
Sbjct: 515 WSGDFTQGPQSAKTRFWKNVRYHMP 539
>gi|4504657 interleukin 18 receptor accessory protein precursor
[Homo sapiens]
Length = 599
Score = 68.2 bits (165), Expect = 1e-11
Identities = 80/319 (25%), Positives = 146/319 (45%), Gaps = 24/319 (7%)
Query: 9 PDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQW-LKDGLPLGIGGHYSLHEY 67
PD L P ED L LG + ++C A P ++W +KD + S+ E
Sbjct: 251 PDILDPVED-TLEVELGKPLTISCKARF-GFERVFNPVIKWYIKDS---DLEWEVSVPEA 305
Query: 68 SWVKANLS-EVLVSSVLGVNVTSTEVYGAFTCSIQNI---SFSSFTLQRAGPTSHVAAVL 123
+K+ L E++ +++ VT ++ F C +QN + S L+ + +L
Sbjct: 306 KSIKSTLKDEIIERNIILEKVTQRDLRRKFVCFVQNSIGNTTQSVQLKEKRGVVLLYILL 365
Query: 124 ASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEVE-INDGKLYDAYVSY---SDCPED-- 177
++ L+A+L A+ L + + ++L Y+ + + + D K +DA+VSY S P +
Sbjct: 366 GTIGTLVAVLAASALLYRHWIEIVLLYRTYQSKDQTLGDKKDFDAFVSYAKWSSFPSEAT 425
Query: 178 ----RKFVNFILKPQ-LERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVLSDAF 232
+ + L P LE + GY L L +RD+ P + D++ + R RR I +LS +
Sbjct: 426 SSLSEEHLALSLFPDVLENKYGYSLCLLERDVAPGGVYAEDIVSIIKRSRRGIFILSPNY 485
Query: 233 LSRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLLLWRP-G 291
++ L + T + I I F + + P L+++ ++ + WR
Sbjct: 486 VNGPSIFELQAAVNLALDDQTLKLILIKFCYFQEPESLP--HLVKKALRVLPTVTWRGLK 543
Query: 292 SVTPSSDFWKEVQLALPRK 310
SV P+S FW +++ +P K
Sbjct: 544 SVPPNSRFWAKMRYHMPVK 562
>gi|19718734 toll-like receptor 2 [Homo sapiens]
Length = 784
Score = 46.6 bits (109), Expect = 4e-05
Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 15/201 (7%)
Query: 118 HVAAVLASLLVLLALLLAALLYVKCRLNVLLWYQD---AYGEVEINDGKL------YDAY 168
H A+++ + L LL+ L V C LWY A+ + + K YDA+
Sbjct: 586 HRTALVSGMCCALFLLIL-LTGVLCHRFHGLWYMKMMWAWLQAKRKPRKAPSRNICYDAF 644
Query: 169 VSYSDCPEDRKFVNFILKPQLER-RRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVV 227
VSYS+ D +V ++ +LE +KL L RD +P +++ ++ + + + V
Sbjct: 645 VSYSE--RDAYWVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTVFV 702
Query: 228 LSDAFLSRAWCSHSFREGLCRLL-ELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLL 286
LS+ F+ WC + RL E I I E + LR+ + T L
Sbjct: 703 LSENFVKSEWCKYELDFSHFRLFDENNDAAILILLEPIEKKAIPQRFCKLRKIMNTKTYL 762
Query: 287 LWRPGSVTPSSDFWKEVQLAL 307
W P FW ++ A+
Sbjct: 763 EW-PMDEAQREGFWVNLRAAI 782
>gi|197276654 myeloid differentiation primary response gene 88 [Homo
sapiens]
Length = 309
Score = 44.7 bits (104), Expect = 2e-04
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 165 YDAYVSYSDCPEDRKFVNFILKPQLERRRGYKLFLDDRDLLPRA---EPSADLLVNLSRC 221
+DA++ Y CP D +FV +++ + KL + DRD+LP +++L+ RC
Sbjct: 174 FDAFICY--CPSDIQFVQEMIRQLEQTNYRLKLCVSDRDVLPGTCVWSIASELIE--KRC 229
Query: 222 RRLIVVLSDAFLSRAWC 238
RR++VV+SD +L C
Sbjct: 230 RRMVVVVSDDYLQSKEC 246
>gi|19924149 toll-like receptor 4 precursor [Homo sapiens]
Length = 839
Score = 43.5 bits (101), Expect = 3e-04
Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 20/191 (10%)
Query: 125 SLLVLLALLLAALLYVKCRLNVLLWYQDAYGEVEINDGK-LYDAYVSYSDCPEDRKFVNF 183
S+L +L + + A+L K +++L G ++ G+ +YDA+V YS ED N
Sbjct: 637 SVLSVLVVSVVAVLVYKFYFHLML----LAGCIKYGRGENIYDAFVIYSSQDEDW-VRNE 691
Query: 184 ILKPQLERRRGYKLFLDDRDLLPRAEPSADLL-VNLSRCRRLIVVLSDAFLSRAWCSHSF 242
++K E ++L L RD +P +A+++ + R++IVV+S F+ WC +
Sbjct: 692 LVKNLEEGVPPFQLCLHYRDFIPGVAIAANIIHEGFHKSRKVIVVVSQHFIQSRWCIFEY 751
Query: 243 R-EGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHRHLVTLL-----LWRPGSVTPS 296
+ L IFI + + LLRQ L LL L SV
Sbjct: 752 EIAQTWQFLSSRAGIIFIVLQKVEK-------TLLRQQVELYRLLSRNTYLEWEDSVLGR 804
Query: 297 SDFWKEVQLAL 307
FW+ ++ AL
Sbjct: 805 HIFWRRLRKAL 815
>gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]
Length = 1349
Score = 38.9 bits (89), Expect = 0.009
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 8 APDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGGHYSLHEY 67
AP + + Q + G S+ + CTA+ P P V WLK+G LG G Y + +
Sbjct: 137 APPTFTETPPQYIEAKEGGSITMTCTAF--GNPK---PIVTWLKEGTLLGASGKYQVSDG 191
Query: 68 SWVKANLSEVLVSSVLGVNVTSTEVYGAFTC---SIQNISFSSFTLQRAGP 115
S L V S E GA+TC SIQ + + L GP
Sbjct: 192 S--------------LTVTSVSREDRGAYTCRAYSIQGEAVHTTHLLVQGP 228
>gi|4503173 coxsackie virus and adenovirus receptor precursor [Homo
sapiens]
Length = 365
Score = 38.1 bits (87), Expect = 0.015
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 66 EYSWVKANLSEVL--------VSSVLGVNVTSTEVYGAFTCSIQNISFSSFTLQRAG--P 115
+Y W K + S+ + SSV+ V S+E G ++C+++N S L R P
Sbjct: 172 QYEWQKLSDSQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQCLLRLNVVP 231
Query: 116 TSHVAAVLASLLV--LLALLLAALLYVKCR 143
S+ A ++A ++ LLAL L L+ CR
Sbjct: 232 PSNKAGLIAGAIIGTLLALALIGLIIFCCR 261
>gi|20143971 toll-like receptor 6 [Homo sapiens]
Length = 796
Score = 37.4 bits (85), Expect = 0.025
Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 19/162 (11%)
Query: 158 EINDGKLYDAYVSYSDCPEDRKFVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVN 217
E+ + A++SYS+ D +V L P LE+ ++ L +R+ +P +++
Sbjct: 635 ELQRNLQFHAFISYSE--HDSAWVKSELVPYLEKE-DIQICLHERNFVPGKSIVENIINC 691
Query: 218 LSRCRRLIVVLSDAFLSRAWCSHS--------FREGLCRLLELTRRPIFITFEGQRRDPA 269
+ + + I VLS F+ WC + F EG L+ + PI + +
Sbjct: 692 IEKSYKSIFVLSPNFVQSEWCHYELYFAHHNLFHEGSNNLILILLEPI---PQNSIPNKY 748
Query: 270 HPALRLLRQHRHLVTLLLWRPGSVTPSSDFWKEVQLALPRKV 311
H L+ Q T L W P + FW ++ A K+
Sbjct: 749 HKLKALMTQR----TYLQW-PKEKSKRGLFWANIRAAFNMKL 785
>gi|41350337 toll-like receptor 1 [Homo sapiens]
Length = 786
Score = 37.4 bits (85), Expect = 0.025
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 158 EINDGKLYDAYVSYSDCPEDRKFVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVN 217
E+ + A++SYS D +V L P LE+ G ++ L +R+ +P +++
Sbjct: 630 ELQRNLQFHAFISYSG--HDSFWVKNELLPNLEKE-GMQICLHERNFVPGKSIVENIITC 686
Query: 218 LSRCRRLIVVLSDAFLSRAWCSHS--------FREGLCRLLELTRRPI 257
+ + + I VLS F+ WC + F EG L+ + PI
Sbjct: 687 IEKSYKSIFVLSPNFVQSEWCHYELYFAHHNLFHEGSNSLILILLEPI 734
>gi|16751843 toll-like receptor 5 [Homo sapiens]
Length = 858
Score = 37.0 bits (84), Expect = 0.032
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 20/175 (11%)
Query: 91 EVYGAFTCSIQNISFSSFTLQRAGPTSHVAAVLASLLVL----LALLLAALLYV-KCRLN 145
++Y + S +S S + + + ++ SL ++ L L L +L V K R
Sbjct: 607 DIYCVYPDSFSGVSLFSLSTEGCDEEEVLKSLKFSLFIVCTVTLTLFLMTILTVTKFRGF 666
Query: 146 VLLWYQDAYGEVEIN-------DGKLYDAYVSYSDCPEDRKFV-NFILK---PQLERRRG 194
+ Y+ A V + D YDAY+ +S +D +V N +LK Q +
Sbjct: 667 CFICYKTAQRLVFKDHPQGTEPDMYKYDAYLCFSS--KDFTWVQNALLKHLDTQYSDQNR 724
Query: 195 YKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVLSDAFLSRAWC--SHSFREGLC 247
+ L ++RD +P A++ + R+++ ++S FL WC + S+ +G C
Sbjct: 725 FNLCFEERDFVPGENRIANIQDAIWNSRKIVCLVSRHFLRDGWCLEAFSYAQGRC 779
>gi|62865621 toll-like receptor 10 precursor [Homo sapiens]
Length = 811
Score = 35.0 bits (79), Expect = 0.12
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 16/136 (11%)
Query: 121 AVLASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEV-------------EINDGKLYDA 167
A+L +V++ L+L + C L WY G+ ++ + A
Sbjct: 577 ALLIVTIVVIMLVLGLAVAFCCLHFDLPWYLRMLGQCTQTWHRVRKTTQEQLKRNVRFHA 636
Query: 168 YVSYSDCPEDRKFVNFILKPQLERRRGYKLF-LDDRDLLPRAEPSADLLVNLSRCRRLIV 226
++SYS+ D +V L P LE+ G L L + P S +++ + + + I
Sbjct: 637 FISYSE--HDSLWVKNELIPNLEKEDGSILICLYESYFDPGKSISENIVSFIEKSYKSIF 694
Query: 227 VLSDAFLSRAWCSHSF 242
VLS F+ WC + F
Sbjct: 695 VLSPNFVQNEWCHYEF 710
>gi|62865618 toll-like receptor 10 precursor [Homo sapiens]
Length = 811
Score = 35.0 bits (79), Expect = 0.12
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 16/136 (11%)
Query: 121 AVLASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEV-------------EINDGKLYDA 167
A+L +V++ L+L + C L WY G+ ++ + A
Sbjct: 577 ALLIVTIVVIMLVLGLAVAFCCLHFDLPWYLRMLGQCTQTWHRVRKTTQEQLKRNVRFHA 636
Query: 168 YVSYSDCPEDRKFVNFILKPQLERRRGYKLF-LDDRDLLPRAEPSADLLVNLSRCRRLIV 226
++SYS+ D +V L P LE+ G L L + P S +++ + + + I
Sbjct: 637 FISYSE--HDSLWVKNELIPNLEKEDGSILICLYESYFDPGKSISENIVSFIEKSYKSIF 694
Query: 227 VLSDAFLSRAWCSHSF 242
VLS F+ WC + F
Sbjct: 695 VLSPNFVQNEWCHYEF 710
>gi|58331253 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform a [Homo sapiens]
Length = 6620
Score = 35.0 bits (79), Expect = 0.12
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Query: 6 DRAPDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGGHYSLH 65
D AP FL+ ++Q ++ G V+ +C VV+G +PSV+W KDG L HY ++
Sbjct: 5123 DAAPVFLTELQNQEVQD--GYPVSFDC---VVTGQ--PMPSVRWFKDGKLLEEDDHYMIN 5175
Query: 66 E 66
E
Sbjct: 5176 E 5176
>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 35.0 bits (79), Expect = 0.12
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Query: 6 DRAPDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGGHYSLH 65
D AP FL+ ++Q ++ G V+ +C VV+G +PSV+W KDG L HY ++
Sbjct: 5123 DAAPVFLTELQNQEVQD--GYPVSFDC---VVTGQ--PMPSVRWFKDGKLLEEDDHYMIN 5175
Query: 66 E 66
E
Sbjct: 5176 E 5176
>gi|61742797 basal cell adhesion molecule isoform 2 precursor [Homo
sapiens]
Length = 588
Score = 33.9 bits (76), Expect = 0.27
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 10 DFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGGHYSL 64
D L SE +VL L SS +NC+ V G P+++W KD PLG G SL
Sbjct: 362 DPLELSEGKVLSLPLNSSAVVNCS---VHG--LPTPALRWTKDSTPLGDGPMLSL 411
>gi|31543106 basal cell adhesion molecule isoform 1 precursor [Homo
sapiens]
Length = 628
Score = 33.9 bits (76), Expect = 0.27
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 10 DFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGGHYSL 64
D L SE +VL L SS +NC+ V G P+++W KD PLG G SL
Sbjct: 362 DPLELSEGKVLSLPLNSSAVVNCS---VHG--LPTPALRWTKDSTPLGDGPMLSL 411
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 33.9 bits (76), Expect = 0.27
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 17/78 (21%)
Query: 25 GSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGGHYSLHEYSWVKANLSEVLVSSVLG 84
GSS ++ C + G PS+ WL+DG PLG+ H ++ + VL
Sbjct: 3450 GSSTSMAC---ITDGTPA--PSMAWLRDGQPLGLDAHLTVSTH------------GMVLQ 3492
Query: 85 VNVTSTEVYGAFTCSIQN 102
+ TE G +TC N
Sbjct: 3493 LLKAETEDSGKYTCIASN 3510
Score = 32.0 bits (71), Expect = 1.0
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 18/89 (20%)
Query: 14 PSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGGHYSLHEYSWVKAN 73
PS+ VL LG +V L C A + P +QWLKDG P+ G + V AN
Sbjct: 3253 PSDVSVL---LGENVELVCNANGIP-----TPLIQWLKDGKPIASGETERIR----VSAN 3300
Query: 74 LSEVLVSSVLGVNVTSTEVYGAFTCSIQN 102
S L + T G +TC N
Sbjct: 3301 ------GSTLNIYGALTSDTGKYTCVATN 3323
Score = 30.4 bits (67), Expect = 3.0
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 19/78 (24%)
Query: 26 SSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGGHYSLHEYSWVKANLSEVLVSS-VLG 84
+SV+L C A SG LPS+ W KDG P+ + +N +L +L
Sbjct: 2402 NSVSLTCEA---SG--IPLPSITWFKDGWPVSL-------------SNSVRILSGGRMLR 2443
Query: 85 VNVTSTEVYGAFTCSIQN 102
+ T+ E G +TC ++N
Sbjct: 2444 LMQTTMEDAGQYTCVVRN 2461
Score = 30.4 bits (67), Expect = 3.0
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 45 PSVQWLKDGLPLGIGGHYSL----HEYSWVKANLSEVLVSSVLGVN 86
P + WLK+GLPL + H L V+A +S+V V + + N
Sbjct: 3372 PQINWLKNGLPLPLSSHIRLLAAGQVIRIVRAQVSDVAVYTCVASN 3417
>gi|134244585 putative neuronal cell adhesion molecule [Homo
sapiens]
Length = 814
Score = 33.9 bits (76), Expect = 0.27
Identities = 37/128 (28%), Positives = 49/128 (38%), Gaps = 27/128 (21%)
Query: 7 RAPDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGGHYSLHE 66
+AP + RPA G++ C A PH V WLK+G LG GGH L
Sbjct: 327 QAPAEFVQHPQSISRPA-GTTAMFTCQAQGEPPPH-----VTWLKNGQVLGPGGHVRL-- 378
Query: 67 YSWVKANLSEVLVSSVLGVNVTSTEVYGAFTCSIQNISFSSFTLQR---------AGPTS 117
K N S + +S + E + C +N + SS R GP
Sbjct: 379 ----KNNNSTLTISGI------GPEDEAIYQCVAENSAGSSQASARLTVLWAEGLPGPPR 428
Query: 118 HVAAVLAS 125
+V AV S
Sbjct: 429 NVRAVSVS 436
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 32.7 bits (73), Expect = 0.61
Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 21/84 (25%)
Query: 24 LGSSVALNCTAWVVSGPHCSLP-SVQWLKDGLPLGIGGHYSL--HEYSWVKANLSEVLVS 80
LGSS+ + C VSG SLP S QW KDG + Y L HE S VS
Sbjct: 5250 LGSSIHMECK---VSG---SLPISAQWFKDGKEISTSAKYRLVCHERS----------VS 5293
Query: 81 SVLGVNVTSTEVYGAFTCSIQNIS 104
L VN E +TC + N++
Sbjct: 5294 --LEVNNLELEDTANYTCKVSNVA 5315
Score = 31.2 bits (69), Expect = 1.8
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 16/77 (20%)
Query: 45 PSVQWLKDGLPLGIGGHYSLHEYSWVKANLSEVLVSSVLGVNVTSTEVYGAFTCSIQNI- 103
P++ W+KDG PL + N+ E S+VL + + + +G +T + N
Sbjct: 24341 PNISWVKDGEPL----------KQTTRVNVEETATSTVLHIKEGNKDDFGKYTVTATNSA 24390
Query: 104 -----SFSSFTLQRAGP 115
+ S L++ GP
Sbjct: 24391 GTATENLSVIVLEKPGP 24407
Score = 30.4 bits (67), Expect = 3.0
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 45 PSVQWLKDGLPLGIGGHYSLHEYSWVKANLSEVLVSSVLGVNVTSTEVYGAFTCSIQN 102
P+ W KDG + GG Y LSE L ++ T T G +TC+++N
Sbjct: 32881 PTAIWTKDGKAITQGGKY----------KLSEDKGGFFLEIHKTDTSDSGLYTCTVKN 32928
Score = 29.6 bits (65), Expect = 5.2
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 45 PSVQWLKDGLPLGIGGHYS-LHE-YSWVKANLSEVLVSSVLGVNVTSTEVYGAFTC 98
P+++W KDG PL +G + +HE + ++ + L VT+T G+ +C
Sbjct: 31824 PTLKWEKDGQPLSLGPNIEIIHEGLDYYALHIRDTLPEDTGYYRVTATNTAGSTSC 31879
>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3874
Score = 32.0 bits (71), Expect = 1.0
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 18/79 (22%)
Query: 24 LGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGGHYSLHEYSWVKANLSEVLVSSVL 83
+G S+ L+C VV G +P + W+KDGLPL G H L L + L
Sbjct: 3041 VGGSIQLDC---VVRGD--PVPDIHWIKDGLPLR-GSH------------LRHQLQNGSL 3082
Query: 84 GVNVTSTEVYGAFTCSIQN 102
++ T + G + C +N
Sbjct: 3083 TIHRTERDDAGRYQCLAEN 3101
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,276,565
Number of Sequences: 37866
Number of extensions: 842365
Number of successful extensions: 2446
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 2255
Number of HSP's gapped (non-prelim): 227
length of query: 410
length of database: 18,247,518
effective HSP length: 105
effective length of query: 305
effective length of database: 14,271,588
effective search space: 4352834340
effective search space used: 4352834340
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.