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Search of human proteins with 113425405
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113425405 PREDICTED: similar to dynamin 1 [Homo sapiens]
(105 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|113425405 PREDICTED: similar to dynamin 1 [Homo sapiens] 222 6e-59
gi|239745286 PREDICTED: hypothetical protein XP_002343417 [Homo ... 211 1e-55
gi|239745270 PREDICTED: hypothetical protein XP_002343416 [Homo ... 127 2e-30
gi|239745262 PREDICTED: hypothetical protein XP_002343372 [Homo ... 127 2e-30
gi|56549117 dynamin 1 isoform 2 [Homo sapiens] 122 8e-29
gi|59853099 dynamin 1 isoform 1 [Homo sapiens] 122 8e-29
gi|42544243 dynamin 3 isoform a [Homo sapiens] 92 9e-20
gi|209915561 dynamin 3 isoform b [Homo sapiens] 92 9e-20
gi|56549125 dynamin 2 isoform 4 [Homo sapiens] 91 2e-19
gi|56549123 dynamin 2 isoform 2 [Homo sapiens] 91 2e-19
gi|56549121 dynamin 2 isoform 1 [Homo sapiens] 91 2e-19
gi|56549119 dynamin 2 isoform 3 [Homo sapiens] 91 2e-19
gi|239756350 PREDICTED: UPF0621 protein C-like [Homo sapiens] 60 4e-10
gi|239750876 PREDICTED: UPF0621 protein C-like [Homo sapiens] 60 4e-10
gi|169208224 PREDICTED: UPF0621 protein C-like [Homo sapiens] 60 4e-10
gi|239756412 PREDICTED: similar to dynamin 1, partial [Homo sapi... 36 0.006
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 33 0.063
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 33 0.063
gi|239756410 PREDICTED: similar to dynamin 1, partial [Homo sapi... 32 0.082
gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens] 31 0.24
gi|226437579 NAC alpha domain containing [Homo sapiens] 30 0.31
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens] 30 0.31
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens] 30 0.31
gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] 30 0.31
gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens] 30 0.31
gi|110832843 TBP-associated factor 4 [Homo sapiens] 30 0.31
gi|157671951 solute carrier family 4, anion exchanger, member 3 ... 30 0.41
gi|157671953 solute carrier family 4, anion exchanger, member 3 ... 30 0.41
gi|157738687 WEE1 homolog 2 [Homo sapiens] 30 0.53
gi|197100650 NTPase, KAP family P-loop domain containing 1 isofo... 28 1.2
>gi|113425405 PREDICTED: similar to dynamin 1 [Homo sapiens]
Length = 105
Score = 222 bits (565), Expect = 6e-59
Identities = 105/105 (100%), Positives = 105/105 (100%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWLQ 60
MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWLQ
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWLQ 60
Query: 61 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALGASGTPPHRGGSHLE 105
VQSIPDAHRYQRLPPTAPKSPTRDAQRSALGASGTPPHRGGSHLE
Sbjct: 61 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALGASGTPPHRGGSHLE 105
>gi|239745286 PREDICTED: hypothetical protein XP_002343417 [Homo
sapiens]
Length = 103
Score = 211 bits (536), Expect = 1e-55
Identities = 102/105 (97%), Positives = 102/105 (97%), Gaps = 2/105 (1%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWLQ 60
MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMP PPVDDTWLQ
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMP--PPVDDTWLQ 58
Query: 61 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALGASGTPPHRGGSHLE 105
VQSIPDAHRYQRLPPTAPKSPTRDAQRSALG SGTPPHRGGSHLE
Sbjct: 59 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALGTSGTPPHRGGSHLE 103
>gi|239745270 PREDICTED: hypothetical protein XP_002343416 [Homo
sapiens]
Length = 63
Score = 127 bits (319), Expect = 2e-30
Identities = 59/59 (100%), Positives = 59/59 (100%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWL 59
MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWL
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWL 59
>gi|239745262 PREDICTED: hypothetical protein XP_002343372 [Homo
sapiens]
Length = 63
Score = 127 bits (319), Expect = 2e-30
Identities = 59/59 (100%), Positives = 59/59 (100%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWL 59
MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWL
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWL 59
>gi|56549117 dynamin 1 isoform 2 [Homo sapiens]
Length = 851
Score = 122 bits (305), Expect = 8e-29
Identities = 64/102 (62%), Positives = 73/102 (71%), Gaps = 11/102 (10%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWLQ 60
+YSCG+QNTLMEE AEQAQ+ DEML M+HALKEALSIIGDIN TTV+ PMPPPVDD+WLQ
Sbjct: 705 LYSCGDQNTLMEESAEQAQRRDEMLRMYHALKEALSIIGDINTTTVSTPMPPPVDDSWLQ 764
Query: 61 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALGASGTPPHRGGS 102
VQS+P R PT+ +P R A PP R GS
Sbjct: 765 VQSVPAGRR----SPTSSPTPQR-------RAPAVPPARPGS 795
>gi|59853099 dynamin 1 isoform 1 [Homo sapiens]
Length = 864
Score = 122 bits (305), Expect = 8e-29
Identities = 64/102 (62%), Positives = 73/102 (71%), Gaps = 11/102 (10%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWLQ 60
+YSCG+QNTLMEE AEQAQ+ DEML M+HALKEALSIIGDIN TTV+ PMPPPVDD+WLQ
Sbjct: 705 LYSCGDQNTLMEESAEQAQRRDEMLRMYHALKEALSIIGDINTTTVSTPMPPPVDDSWLQ 764
Query: 61 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALGASGTPPHRGGS 102
VQS+P R PT+ +P R A PP R GS
Sbjct: 765 VQSVPAGRR----SPTSSPTPQR-------RAPAVPPARPGS 795
>gi|42544243 dynamin 3 isoform a [Homo sapiens]
Length = 863
Score = 92.0 bits (227), Expect = 9e-20
Identities = 52/103 (50%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWLQ 60
+YS +QNTLMEE AEQAQ+ DEML M+ ALKEAL IIGDI+ TV+ P PPPVDD+W+Q
Sbjct: 699 LYSSEDQNTLMEESAEQAQRRDEMLRMYQALKEALGIIGDISTATVSTPAPPPVDDSWIQ 758
Query: 61 --VQSIPDAHRYQRLPP-TAPKSPTRDAQRSALGASGTPPHRG 100
+S P + QR P +AP + + A PH G
Sbjct: 759 HSRRSPPPSPTTQRRPTLSAPLARPTSGRGPAPAIPSPGPHSG 801
>gi|209915561 dynamin 3 isoform b [Homo sapiens]
Length = 859
Score = 92.0 bits (227), Expect = 9e-20
Identities = 52/103 (50%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWLQ 60
+YS +QNTLMEE AEQAQ+ DEML M+ ALKEAL IIGDI+ TV+ P PPPVDD+W+Q
Sbjct: 695 LYSSEDQNTLMEESAEQAQRRDEMLRMYQALKEALGIIGDISTATVSTPAPPPVDDSWIQ 754
Query: 61 --VQSIPDAHRYQRLPP-TAPKSPTRDAQRSALGASGTPPHRG 100
+S P + QR P +AP + + A PH G
Sbjct: 755 HSRRSPPPSPTTQRRPTLSAPLARPTSGRGPAPAIPSPGPHSG 797
>gi|56549125 dynamin 2 isoform 4 [Homo sapiens]
Length = 866
Score = 90.9 bits (224), Expect = 2e-19
Identities = 49/97 (50%), Positives = 66/97 (68%), Gaps = 13/97 (13%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWLQ 60
+YS +Q++LMEE A+QAQ+ D+ML M+HALKEAL+IIGDI+ +TV+ P+PPPVDDTWLQ
Sbjct: 695 LYSSADQSSLMEESADQAQRRDDMLRMYHALKEALNIIGDISTSTVSTPVPPPVDDTWLQ 754
Query: 61 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALGASGTPP 97
S +H PT + P S++ G PP
Sbjct: 755 SAS---SH-----SPTPQRRPV-----SSIHPPGRPP 778
>gi|56549123 dynamin 2 isoform 2 [Homo sapiens]
Length = 870
Score = 90.9 bits (224), Expect = 2e-19
Identities = 49/97 (50%), Positives = 66/97 (68%), Gaps = 13/97 (13%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWLQ 60
+YS +Q++LMEE A+QAQ+ D+ML M+HALKEAL+IIGDI+ +TV+ P+PPPVDDTWLQ
Sbjct: 699 LYSSADQSSLMEESADQAQRRDDMLRMYHALKEALNIIGDISTSTVSTPVPPPVDDTWLQ 758
Query: 61 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALGASGTPP 97
S +H PT + P S++ G PP
Sbjct: 759 SAS---SH-----SPTPQRRPV-----SSIHPPGRPP 782
>gi|56549121 dynamin 2 isoform 1 [Homo sapiens]
Length = 870
Score = 90.9 bits (224), Expect = 2e-19
Identities = 49/97 (50%), Positives = 66/97 (68%), Gaps = 13/97 (13%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWLQ 60
+YS +Q++LMEE A+QAQ+ D+ML M+HALKEAL+IIGDI+ +TV+ P+PPPVDDTWLQ
Sbjct: 699 LYSSADQSSLMEESADQAQRRDDMLRMYHALKEALNIIGDISTSTVSTPVPPPVDDTWLQ 758
Query: 61 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALGASGTPP 97
S +H PT + P S++ G PP
Sbjct: 759 SAS---SH-----SPTPQRRPV-----SSIHPPGRPP 782
>gi|56549119 dynamin 2 isoform 3 [Homo sapiens]
Length = 866
Score = 90.9 bits (224), Expect = 2e-19
Identities = 49/97 (50%), Positives = 66/97 (68%), Gaps = 13/97 (13%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWLQ 60
+YS +Q++LMEE A+QAQ+ D+ML M+HALKEAL+IIGDI+ +TV+ P+PPPVDDTWLQ
Sbjct: 695 LYSSADQSSLMEESADQAQRRDDMLRMYHALKEALNIIGDISTSTVSTPVPPPVDDTWLQ 754
Query: 61 VQSIPDAHRYQRLPPTAPKSPTRDAQRSALGASGTPP 97
S +H PT + P S++ G PP
Sbjct: 755 SAS---SH-----SPTPQRRPV-----SSIHPPGRPP 778
>gi|239756350 PREDICTED: UPF0621 protein C-like [Homo sapiens]
Length = 135
Score = 60.1 bits (144), Expect = 4e-10
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMP 49
+YSCG++N LME+ EQA+ +E L MHH L+EA +IIGDI T V+MP
Sbjct: 82 LYSCGDENMLMEDSTEQAKWCNETLCMHHVLREAPNIIGDIKTTMVSMP 130
>gi|239750876 PREDICTED: UPF0621 protein C-like [Homo sapiens]
Length = 135
Score = 60.1 bits (144), Expect = 4e-10
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMP 49
+YSCG++N LME+ EQA+ +E L MHH L+EA +IIGDI T V+MP
Sbjct: 82 LYSCGDENMLMEDSTEQAKWCNETLCMHHVLREAPNIIGDIKTTMVSMP 130
>gi|169208224 PREDICTED: UPF0621 protein C-like [Homo sapiens]
Length = 155
Score = 60.1 bits (144), Expect = 4e-10
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALSIIGDINRTTVTMP 49
+YSCG++N LME+ EQA+ +E L MHH L+EA +IIGDI T V+MP
Sbjct: 102 LYSCGDENMLMEDSTEQAKWCNETLCMHHVLREAPNIIGDIKTTMVSMP 150
>gi|239756412 PREDICTED: similar to dynamin 1, partial [Homo
sapiens]
Length = 350
Score = 36.2 bits (82), Expect = 0.006
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALS 36
+YS N TL+EE AEQAQ+ DEML + A++ AL+
Sbjct: 158 LYSRRNLQTLVEESAEQAQRCDEMLLLRAAVQPALA 193
Score = 36.2 bits (82), Expect = 0.006
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEMLHMHHALKEALS 36
+YS N TL+EE AEQAQ+ DEML + A++ AL+
Sbjct: 303 LYSRRNLQTLVEESAEQAQRCDEMLLLRAAVQPALA 338
Score = 33.9 bits (76), Expect = 0.028
Identities = 15/23 (65%), Positives = 19/23 (82%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDE 23
++S GN+ TLMEE AEQAQ+ DE
Sbjct: 251 LHSRGNEKTLMEESAEQAQRRDE 273
Score = 30.8 bits (68), Expect = 0.24
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 5 GNQNTLMEELAEQAQQHDE 23
GN+ TLMEE AEQAQ+ DE
Sbjct: 110 GNEKTLMEESAEQAQRCDE 128
Score = 25.8 bits (55), Expect = 7.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEML 25
++S GN+ TL+E AEQA Q +L
Sbjct: 15 LHSRGNEKTLVEASAEQADQGVHLL 39
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 32.7 bits (73), Expect = 0.063
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
Query: 49 PMPPPVDD--------TWLQVQSIPDAHRYQRLP-PTAPKSPTRDAQRSALGASGTPPHR 99
P PPP+D+ T + +++ + P P AP P D + G GTPP R
Sbjct: 802 PEPPPLDESPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPGPEGTPPSR 861
Query: 100 GGS 102
G S
Sbjct: 862 GSS 864
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 32.7 bits (73), Expect = 0.063
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
Query: 49 PMPPPVDD--------TWLQVQSIPDAHRYQRLP-PTAPKSPTRDAQRSALGASGTPPHR 99
P PPP+D+ T + +++ + P P AP P D + G GTPP R
Sbjct: 884 PEPPPLDESPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPGPEGTPPSR 943
Query: 100 GGS 102
G S
Sbjct: 944 GSS 946
>gi|239756410 PREDICTED: similar to dynamin 1, partial [Homo
sapiens]
Length = 191
Score = 32.3 bits (72), Expect = 0.082
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDE 23
++S GN+ TL+EE AEQAQ+ DE
Sbjct: 106 LHSRGNEKTLVEESAEQAQRRDE 128
Score = 30.4 bits (67), Expect = 0.31
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEML 25
+YS GN+ TL+EE AEQA Q +L
Sbjct: 158 LYSRGNEKTLLEESAEQADQGVHLL 182
Score = 27.7 bits (60), Expect = 2.0
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1 MYSCGNQNTLMEELAEQAQQHDEML 25
+YS GN+ TL+E AEQA Q +L
Sbjct: 15 LYSRGNEKTLVEASAEQADQGVHLL 39
>gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens]
Length = 931
Score = 30.8 bits (68), Expect = 0.24
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 19/62 (30%)
Query: 52 PPVDDTWLQV--------------QSIPDAHRYQRLPPTAPKSPTRDAQRSALGASGTPP 97
PP+D ++ ++ Q H YQ + P PKS ALG+SGTPP
Sbjct: 253 PPMDSSYAKILQQQQLFLQLQILNQQQQQHHNYQAILPAPPKSAGE-----ALGSSGTPP 307
Query: 98 HR 99
R
Sbjct: 308 VR 309
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 30.4 bits (67), Expect = 0.31
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 46 VTMPMPPPVDDTWLQVQSIPDAHRYQRLPPTAPKSPTRDAQ 86
+++P PPP D++ S P Y LP P RD++
Sbjct: 161 LSVPSPPPDPDSFFTPPSTPTKTTYALLPACGPHGDARDSE 201
>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 30.4 bits (67), Expect = 0.31
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 46 VTMPMPPPVDDTWLQVQSIPDAHRYQRLPPTAPKSPTRDAQ 86
+++P PPP D++ S P Y LP P RD++
Sbjct: 161 LSVPSPPPDPDSFFTPPSTPTKTTYALLPACGPHGDARDSE 201
>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 30.4 bits (67), Expect = 0.31
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 46 VTMPMPPPVDDTWLQVQSIPDAHRYQRLPPTAPKSPTRDAQ 86
+++P PPP D++ S P Y LP P RD++
Sbjct: 161 LSVPSPPPDPDSFFTPPSTPTKTTYALLPACGPHGDARDSE 201
>gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 30.4 bits (67), Expect = 0.31
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 46 VTMPMPPPVDDTWLQVQSIPDAHRYQRLPPTAPKSPTRDAQ 86
+++P PPP D++ S P Y LP P RD++
Sbjct: 161 LSVPSPPPDPDSFFTPPSTPTKTTYALLPACGPHGDARDSE 201
>gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 30.4 bits (67), Expect = 0.31
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 46 VTMPMPPPVDDTWLQVQSIPDAHRYQRLPPTAPKSPTRDAQ 86
+++P PPP D++ S P Y LP P RD++
Sbjct: 161 LSVPSPPPDPDSFFTPPSTPTKTTYALLPACGPHGDARDSE 201
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 30.4 bits (67), Expect = 0.31
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 24 MLHMHHALKEALSIIGDINRTTVTMPMPPPVDDTWLQVQSIPDAHRYQRLPPTAPKSPTR 83
+L+ HHA A+S++ N +P+P P + +Q+ P P AP P
Sbjct: 204 LLNSHHAAAPAVSLVN--NGPAALLPLPKPAAPGTV-IQTPPFVGAAAPPAPAAPSPPAA 260
Query: 84 DAQRSALGASGTPP 97
A + A PP
Sbjct: 261 PAPAAPAAAPPPPP 274
>gi|157671951 solute carrier family 4, anion exchanger, member 3
isoform 1 [Homo sapiens]
Length = 1232
Score = 30.0 bits (66), Expect = 0.41
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Query: 64 IPDAHRYQRLPPTAPKSPTRDAQR---SALGASGTPP--HRGGSHLE 105
+P H+ +RLPPT+ + R ++ SA + GTPP GG+ ++
Sbjct: 89 LPPPHKLRRLPPTSARHTRRKRKKEKTSAPPSEGTPPIQEEGGAGVD 135
>gi|157671953 solute carrier family 4, anion exchanger, member 3
isoform 2 [Homo sapiens]
Length = 1259
Score = 30.0 bits (66), Expect = 0.41
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Query: 64 IPDAHRYQRLPPTAPKSPTRDAQR---SALGASGTPP--HRGGSHLE 105
+P H+ +RLPPT+ + R ++ SA + GTPP GG+ ++
Sbjct: 89 LPPPHKLRRLPPTSARHTRRKRKKEKTSAPPSEGTPPIQEEGGAGVD 135
>gi|157738687 WEE1 homolog 2 [Homo sapiens]
Length = 567
Score = 29.6 bits (65), Expect = 0.53
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 41 INRTTVTMPMPPPVDDTWLQVQSIPDAHRYQRLPPTAPKSPTRDAQRSALGASGTPPHRG 100
I RT V+ P+ P + + PD+ R + LP +P +P R + +G P RG
Sbjct: 80 ILRTPVSHPLKCP------ETPAQPDS-RSKLLPSDSPSTPKTMLSRLVISPTGKLPSRG 132
Query: 101 GSHLE 105
HL+
Sbjct: 133 PKHLK 137
>gi|197100650 NTPase, KAP family P-loop domain containing 1 isoform
1 [Homo sapiens]
Length = 619
Score = 28.5 bits (62), Expect = 1.2
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Query: 74 PPTAPKSPTRD---AQRSALGASGTPP 97
PP+ PKSPTRD A A AS PP
Sbjct: 552 PPSPPKSPTRDTPHAAHRANSASRAPP 578
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.129 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,181,762
Number of Sequences: 37866
Number of extensions: 236139
Number of successful extensions: 1044
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 966
Number of HSP's gapped (non-prelim): 110
length of query: 105
length of database: 18,247,518
effective HSP length: 76
effective length of query: 29
effective length of database: 15,369,702
effective search space: 445721358
effective search space used: 445721358
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.