Search of human proteins with 113424213

Search of human proteins with 113424213

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|113424213 PREDICTED: hypothetical protein [Homo sapiens]
         (107 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|113424213 PREDICTED: hypothetical protein [Homo sapiens]           219   4e-58
gi|169206294 PREDICTED: hypothetical protein [Homo sapiens]           217   2e-57
gi|113424485 PREDICTED: hypothetical protein [Homo sapiens]           217   2e-57
gi|21536369 TBP-associated factor 1C isoform 1 [Homo sapiens]          34   0.029
gi|21536367 TBP-associated factor 1C isoform 2 [Homo sapiens]          34   0.029
gi|56549696 E1A binding protein p400 [Homo sapiens]                    32   0.11 
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa...    32   0.11 
gi|239758167 PREDICTED: hypothetical protein XP_002346321 [Homo ...    31   0.19 
gi|239757729 PREDICTED: hypothetical protein [Homo sapiens]            31   0.19 
gi|239752222 PREDICTED: hypothetical protein [Homo sapiens]            31   0.19 
gi|239746743 PREDICTED: hypothetical protein [Homo sapiens]            31   0.19 
gi|40255047 pleckstrin homology domain containing, family H (wit...    30   0.42 
gi|17149834 sortilin 1 preproprotein [Homo sapiens]                    29   0.93 
gi|239746776 PREDICTED: hypothetical protein XP_002343846 [Homo ...    29   0.93 
gi|149944560 forkhead box D4-like 2 [Homo sapiens]                     29   0.93 
gi|76880472 forkhead box D4-like 4 [Homo sapiens]                      29   0.93 
gi|119433677 chloride channel 1, skeletal muscle [Homo sapiens]        28   1.2  
gi|209954781 neurotrophic factor artemin isoform 1 precursor [Ho...    28   1.2  
gi|209954776 neurotrophic factor artemin isoform 1 precursor [Ho...    28   1.2  
gi|66773030 solute carrier family 1, member 1 [Homo sapiens]           28   1.2  
gi|148746187 zinc finger CCCH-type containing 12B [Homo sapiens]       28   1.2  
gi|24586686 voltage-dependent calcium channel gamma-8 subunit [H...    28   1.2  
gi|239753500 PREDICTED: hypothetical protein [Homo sapiens]            28   1.6  
gi|239748051 PREDICTED: hypothetical protein XP_002346521 [Homo ...    28   1.6  
gi|239745773 PREDICTED: hypothetical protein XP_002343550 [Homo ...    28   1.6  
gi|239745771 PREDICTED: hypothetical protein XP_002343549 [Homo ...    28   1.6  
gi|239745769 PREDICTED: hypothetical protein XP_002343548 [Homo ...    28   1.6  
gi|239741944 PREDICTED: hypothetical protein XP_002342359 [Homo ...    28   1.6  
gi|112421108 capicua homolog [Homo sapiens]                            28   1.6  
gi|66346695 fibrillin 2 precursor [Homo sapiens]                       28   2.1  

>gi|113424213 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 107

 Score =  219 bits (558), Expect = 4e-58
 Identities = 107/107 (100%), Positives = 107/107 (100%)

Query: 1   MPRRRREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSRALV 60
           MPRRRREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSRALV
Sbjct: 1   MPRRRREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSRALV 60

Query: 61  GLAEASVTRQLTYDWLAERARRAPPGKALGGGLADPTTSVFLDWLKE 107
           GLAEASVTRQLTYDWLAERARRAPPGKALGGGLADPTTSVFLDWLKE
Sbjct: 61  GLAEASVTRQLTYDWLAERARRAPPGKALGGGLADPTTSVFLDWLKE 107


>gi|169206294 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 107

 Score =  217 bits (552), Expect = 2e-57
 Identities = 106/107 (99%), Positives = 106/107 (99%)

Query: 1   MPRRRREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSRALV 60
           MPRRRREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSRALV
Sbjct: 1   MPRRRREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSRALV 60

Query: 61  GLAEASVTRQLTYDWLAERARRAPPGKALGGGLADPTTSVFLDWLKE 107
           GLAEASVTRQLTYDWLAERARRAPPGKALG GLADPTTSVFLDWLKE
Sbjct: 61  GLAEASVTRQLTYDWLAERARRAPPGKALGSGLADPTTSVFLDWLKE 107


>gi|113424485 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 107

 Score =  217 bits (552), Expect = 2e-57
 Identities = 106/107 (99%), Positives = 106/107 (99%)

Query: 1   MPRRRREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSRALV 60
           MPRRRREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSRALV
Sbjct: 1   MPRRRREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSRALV 60

Query: 61  GLAEASVTRQLTYDWLAERARRAPPGKALGGGLADPTTSVFLDWLKE 107
           GLAEASVTRQLTYDWLAERARRAPPGKALG GLADPTTSVFLDWLKE
Sbjct: 61  GLAEASVTRQLTYDWLAERARRAPPGKALGSGLADPTTSVFLDWLKE 107


>gi|21536369 TBP-associated factor 1C isoform 1 [Homo sapiens]
          Length = 869

 Score = 33.9 bits (76), Expect = 0.029
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 8/96 (8%)

Query: 4   RRREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSRALVGLA 63
           +RR + +SSF L+ H+   P + T++  S   PP    P+P + PP+          G+ 
Sbjct: 751 KRRTQLSSSFSLSGHVD--PSEDTSSPHSPEWPPADALPLPPTTPPSQELTPDACAQGV- 807

Query: 64  EASVTRQLTYDWLAERARRAPPGKALGGGLADPTTS 99
             S  RQ+  D++A    + PP +   G    P  S
Sbjct: 808 -PSEQRQMLRDYMA----KLPPQRDTPGCATTPPHS 838


>gi|21536367 TBP-associated factor 1C isoform 2 [Homo sapiens]
          Length = 775

 Score = 33.9 bits (76), Expect = 0.029
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 8/96 (8%)

Query: 4   RRREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSRALVGLA 63
           +RR + +SSF L+ H+   P + T++  S   PP    P+P + PP+          G+ 
Sbjct: 657 KRRTQLSSSFSLSGHVD--PSEDTSSPHSPEWPPADALPLPPTTPPSQELTPDACAQGV- 713

Query: 64  EASVTRQLTYDWLAERARRAPPGKALGGGLADPTTS 99
             S  RQ+  D++A    + PP +   G    P  S
Sbjct: 714 -PSEQRQMLRDYMA----KLPPQRDTPGCATTPPHS 744


>gi|56549696 E1A binding protein p400 [Homo sapiens]
          Length = 3122

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 20  VLLPEQGTATGSSISAPPKPQQPVPVSIPP 49
           VLLP  G A G  +++PP P  P   ++PP
Sbjct: 300 VLLPGAGGAAGFGMTSPPPPTSPSRTAVPP 329


>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
           sapiens]
          Length = 2715

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 34  SAPPKPQQPVPVSIPPASVARGSRALVGLAE--ASVTRQLTYDWLAERARRAPPGKA 88
           ++PP PQ+P PV  PP +    S   V L E   S+ R+ T+ W +      PP  A
Sbjct: 569 TSPPVPQEPAPVPSPPRAPTPPSTP-VPLPEKRRSILREPTFRWTSLTRELPPPPPA 624


>gi|239758167 PREDICTED: hypothetical protein XP_002346321 [Homo
           sapiens]
          Length = 271

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 7/61 (11%)

Query: 37  PKPQQPVPVSIPPASVARGSRALVGLAEASVTRQLTYDWLAERAR------RAP-PGKAL 89
           P P  PV V++PP    RG +++         R     W A  +R      R P PG+AL
Sbjct: 89  PDPALPVSVAVPPCPACRGPQSISRSRPRRAVRPRPGPWPAAPSRGPVRSCRGPRPGRAL 148

Query: 90  G 90
           G
Sbjct: 149 G 149


>gi|239757729 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 329

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 5/56 (8%)

Query: 2  PRRRREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSR 57
          P R R  W  SF       L PE+GT      ++ P P+ P  +  PP S  RG R
Sbjct: 32 PERDRPDWPRSF----KPPLSPEKGTKASGPQTSAPSPRDP-GLHTPPCSPRRGRR 82


>gi|239752222 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 329

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 5/56 (8%)

Query: 2  PRRRREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSR 57
          P R R  W  SF       L PE+GT      ++ P P+ P  +  PP S  RG R
Sbjct: 32 PERDRPDWPRSF----KPPLSPEKGTKASGPQTSAPSPRDP-GLHTPPCSPRRGRR 82


>gi|239746743 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 329

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 5/56 (8%)

Query: 2  PRRRREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSR 57
          P R R  W  SF       L PE+GT      ++ P P+ P  +  PP S  RG R
Sbjct: 32 PERDRPDWPRSF----KPPLSPEKGTKASGPQTSAPSPRDP-GLHTPPCSPRRGRR 82


>gi|40255047 pleckstrin homology domain containing, family H (with
           MyTH4 domain) member 3 [Homo sapiens]
          Length = 793

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 27/78 (34%), Positives = 32/78 (41%), Gaps = 18/78 (23%)

Query: 35  APPKPQQPVPVSIPPASVARGSRAL--VGLAEASVTRQLTYDWLAERARRAPPGKAL--- 89
           APP+   P P   PP S A  + AL   GLA+            AERARR   G+     
Sbjct: 567 APPREDPPRPTPRPPPSAALLAGALWSPGLAKRR----------AERARRGGAGRTAGSI 616

Query: 90  ---GGGLADPTTSVFLDW 104
              GGG A    +V   W
Sbjct: 617 AREGGGGAGTAAAVLGGW 634


>gi|17149834 sortilin 1 preproprotein [Homo sapiens]
          Length = 831

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 8  KWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSRA 58
          +W     L   L LLP   T +   + APP P  P+P    P  V+ G RA
Sbjct: 13 RWPHGLGLLLLLQLLPPS-TLSQDRLDAPPPPAAPLPRWSGPIGVSWGLRA 62


>gi|239746776 PREDICTED: hypothetical protein XP_002343846 [Homo
          sapiens]
          Length = 210

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 5/45 (11%)

Query: 12 SFWLATHLVLLPEQGTAT-----GSSISAPPKPQQPVPVSIPPAS 51
          S W +TH V+LP +   +     GS  S  P P+ P  V  PP S
Sbjct: 55 SSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGS 99


>gi|149944560 forkhead box D4-like 2 [Homo sapiens]
          Length = 416

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 6/60 (10%)

Query: 37  PKPQQPVPVSIPPASVARGSRALVGLAEASVTRQLTYDWLAERARRAPPGKALGGGLADP 96
           P P QPVP + P  +  R   AL+          L Y  L+ R     P KA G  LA P
Sbjct: 240 PAPPQPVPGAYPNTAPGRRPYALLH------PHPLRYLLLSARVYAGAPKKAEGADLATP 293


>gi|76880472 forkhead box D4-like 4 [Homo sapiens]
          Length = 416

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 6/60 (10%)

Query: 37  PKPQQPVPVSIPPASVARGSRALVGLAEASVTRQLTYDWLAERARRAPPGKALGGGLADP 96
           P P QPVP + P  +  R   AL+          L Y  L+ R     P KA G  LA P
Sbjct: 240 PAPPQPVPGAYPNTAPGRRPYALLH------PHPLRYLLLSARVYAGAPKKAEGADLATP 293


>gi|119433677 chloride channel 1, skeletal muscle [Homo sapiens]
          Length = 988

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 14/57 (24%)

Query: 2   PRRRREKWNSSFWLATHLVLLPEQ---GTATGSSISAPPKPQQPVPVSIPPASVARG 55
           P    E WN           LPE     T TG  I+A P+   P P   PP S+A G
Sbjct: 900 PPSSAENWN-----------LPEDRPGATGTGDVIAASPETPVPSPSPEPPLSLAPG 945


>gi|209954781 neurotrophic factor artemin isoform 1 precursor
          [Homo sapiens]
          Length = 220

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 17/84 (20%)

Query: 2  PRRRREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSRALVG 61
          PR++   W +   LA   +L      + GS+  +P   + P PV   PA    G R    
Sbjct: 17 PRQQPALWPT---LAALALLSSVAEASLGSAPRSPAPREGPPPVLASPAGHLPGGR---- 69

Query: 62 LAEASVTRQLTYDWLAERARRAPP 85
                    T  W + RARR PP
Sbjct: 70 ----------TARWCSGRARRPPP 83



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 29  TGSSISAPPKPQQPV-PVSIPPASVARGSRA 58
           +G +   PP+P +P  P   PP+++ RG RA
Sbjct: 75  SGRARRPPPQPSRPAPPPPAPPSALPRGGRA 105


>gi|209954776 neurotrophic factor artemin isoform 1 precursor
          [Homo sapiens]
          Length = 220

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 17/84 (20%)

Query: 2  PRRRREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSRALVG 61
          PR++   W +   LA   +L      + GS+  +P   + P PV   PA    G R    
Sbjct: 17 PRQQPALWPT---LAALALLSSVAEASLGSAPRSPAPREGPPPVLASPAGHLPGGR---- 69

Query: 62 LAEASVTRQLTYDWLAERARRAPP 85
                    T  W + RARR PP
Sbjct: 70 ----------TARWCSGRARRPPP 83



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 29  TGSSISAPPKPQQPV-PVSIPPASVARGSRA 58
           +G +   PP+P +P  P   PP+++ RG RA
Sbjct: 75  SGRARRPPPQPSRPAPPPPAPPSALPRGGRA 105


>gi|66773030 solute carrier family 1, member 1 [Homo sapiens]
          Length = 524

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 9/71 (12%)

Query: 27  TATGSSISAPPKPQQPVPVSIPPASVARGSRALVGLAEASVTRQLTYDWLAERARRAPP- 85
           TAT +SI A   PQ  +   +   S        VGL    VT  +  DWL +R R     
Sbjct: 400 TATSASIGAAGVPQAGLVTMVIVLSA-------VGLPAEDVTLIIAVDWLLDRFRTMVNV 452

Query: 86  -GKALGGGLAD 95
            G A G G+ +
Sbjct: 453 LGDAFGTGIVE 463


>gi|148746187 zinc finger CCCH-type containing 12B [Homo sapiens]
          Length = 825

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 22  LPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSRALVGLAEASVTRQLTYDWLAERAR 81
           L  Q  +TG+  S P     P+P +I P +  +  RALV     S++    Y+    R R
Sbjct: 650 LHAQHPSTGTRSSCPA--DYPMPPNIHPGATPQPGRALVMTRMDSISDSRLYESNPVRQR 707

Query: 82  RAP 84
           R P
Sbjct: 708 RPP 710


>gi|24586686 voltage-dependent calcium channel gamma-8 subunit [Homo
           sapiens]
          Length = 425

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 4/66 (6%)

Query: 6   REKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSRALVGLAEA 65
           R++  +S +L  H     E G     +++ PP P    P   PPA  A     L   A A
Sbjct: 357 RDRGGASGFLTLHNAFPKEAGGGVTVTVTGPPAP----PAPAPPAPSAPAPGTLAKEAAA 412

Query: 66  SVTRQL 71
           S T  L
Sbjct: 413 SNTNTL 418


>gi|239753500 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 213

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 26  GTATGSSISAPPKPQQPVPVSIPPASVARGSRA-----LVGLAEASVTRQLTYDWLAERA 80
           G A    +S PP+  + VP   P  S AR   A      V L  +  TR      L E  
Sbjct: 73  GLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHKTRNREPGMLREAF 132

Query: 81  RRAPP 85
           + APP
Sbjct: 133 KSAPP 137


>gi|239748051 PREDICTED: hypothetical protein XP_002346521 [Homo
           sapiens]
          Length = 213

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 26  GTATGSSISAPPKPQQPVPVSIPPASVARGSRA-----LVGLAEASVTRQLTYDWLAERA 80
           G A    +S PP+  + VP   P  S AR   A      V L  +  TR      L E  
Sbjct: 73  GLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHKTRNREPGMLREAF 132

Query: 81  RRAPP 85
           + APP
Sbjct: 133 KSAPP 137


>gi|239745773 PREDICTED: hypothetical protein XP_002343550 [Homo
           sapiens]
          Length = 323

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 6/87 (6%)

Query: 5   RREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSRALVGLAE 64
           R E W    W++        +G A GS   A   P  P+      A+   G        +
Sbjct: 81  RWEVWGHPLWVSRF------RGWAPGSRRGARSLPASPLGAQARAAACVPGKGGAASRGD 134

Query: 65  ASVTRQLTYDWLAERARRAPPGKALGG 91
              +RQ +   LA R+ RAP  +   G
Sbjct: 135 TPCSRQPSRSPLAGRSVRAPQRRVGAG 161


>gi|239745771 PREDICTED: hypothetical protein XP_002343549 [Homo
           sapiens]
          Length = 323

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 6/87 (6%)

Query: 5   RREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSRALVGLAE 64
           R E W    W++        +G A GS   A   P  P+      A+   G        +
Sbjct: 81  RWEVWGHPLWVSRF------RGWAPGSRRGARSLPASPLGAQARAAACVPGKGGAASRGD 134

Query: 65  ASVTRQLTYDWLAERARRAPPGKALGG 91
              +RQ +   LA R+ RAP  +   G
Sbjct: 135 TPCSRQPSRSPLAGRSVRAPQRRVGAG 161


>gi|239745769 PREDICTED: hypothetical protein XP_002343548 [Homo
           sapiens]
          Length = 323

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 6/87 (6%)

Query: 5   RREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASVARGSRALVGLAE 64
           R E W    W++        +G A GS   A   P  P+      A+   G        +
Sbjct: 81  RWEVWGHPLWVSRF------RGWAPGSRRGARSLPASPLGAQARAAACVPGKGGAASRGD 134

Query: 65  ASVTRQLTYDWLAERARRAPPGKALGG 91
              +RQ +   LA R+ RAP  +   G
Sbjct: 135 TPCSRQPSRSPLAGRSVRAPQRRVGAG 161


>gi|239741944 PREDICTED: hypothetical protein XP_002342359 [Homo
           sapiens]
          Length = 213

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 26  GTATGSSISAPPKPQQPVPVSIPPASVARGSRA-----LVGLAEASVTRQLTYDWLAERA 80
           G A    +S PP+  + VP   P  S AR   A      V L  +  TR      L E  
Sbjct: 73  GLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHKTRNREPGMLREAF 132

Query: 81  RRAPP 85
           + APP
Sbjct: 133 KSAPP 137


>gi|112421108 capicua homolog [Homo sapiens]
          Length = 1608

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 5/80 (6%)

Query: 23  PEQGTATGSSISAPPKPQQPVPVSI--PPASVARGSRALVGLAEASVTRQLTYDWLAERA 80
           P  GT  GS   A   P  PVP+ I  P A    G    V     ++ +QL    +A   
Sbjct: 786 PGGGTTAGSGAGAGSGPNGPVPLGILQPGALGKAGGITQVQYILPTLPQQLQ---VAPAP 842

Query: 81  RRAPPGKALGGGLADPTTSV 100
             AP  KA       PTTS+
Sbjct: 843 APAPGTKAAAPSGPAPTTSI 862


>gi|66346695 fibrillin 2 precursor [Homo sapiens]
          Length = 2912

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 4/49 (8%)

Query: 4  RRREKWNSSFWLATHLVLLPEQGTATGSSISAPPKPQQPVPVSIPPASV 52
          RRR      ++L    V+L  QGTA G     PPKP +P P   PP  V
Sbjct: 3  RRRRLCLQLYFLWLGCVVLWAQGTA-GQPQPPPPKPPRPQP---PPQQV 47


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.131    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,211,049
Number of Sequences: 37866
Number of extensions: 236127
Number of successful extensions: 2178
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 2045
Number of HSP's gapped (non-prelim): 236
length of query: 107
length of database: 18,247,518
effective HSP length: 77
effective length of query: 30
effective length of database: 15,331,836
effective search space: 459955080
effective search space used: 459955080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.