Search of human proteins with 113421639

Search of human proteins with 113421639

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|113421639 PREDICTED: similar to nuclear DNA-binding protein
[Homo sapiens]
         (157 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|113422056 PREDICTED: similar to nuclear DNA-binding protein [...   310   4e-85
gi|113421639 PREDICTED: similar to nuclear DNA-binding protein [...   310   4e-85
gi|239755365 PREDICTED: similar to hCG1791993 [Homo sapiens]          268   1e-72
gi|169198899 PREDICTED: similar to hCG1791993 [Homo sapiens]          268   1e-72
gi|239744148 PREDICTED: hypothetical protein LOC642538 [Homo sap...   266   4e-72
gi|27894373 nuclear DNA-binding protein [Homo sapiens]                252   8e-68
gi|5453583 nuclear DNA-binding protein [Homo sapiens]                 252   8e-68
gi|124249396 coiled-coil domain containing 30 [Homo sapiens]           31   0.38 
gi|31657092 ATP binding cassette, sub-family A (ABC1), member 13...    29   1.9  
gi|36287110 FGFR1 oncogene partner isoform b [Homo sapiens]            28   2.5  
gi|5901954 FGFR1 oncogene partner isoform a [Homo sapiens]             28   2.5  
gi|110611228 utrophin [Homo sapiens]                                   28   3.2  
gi|55770846 catenin, alpha 2 [Homo sapiens]                            27   5.5  
gi|223718250 plastin 1 [Homo sapiens]                                  27   5.5  
gi|223718246 plastin 1 [Homo sapiens]                                  27   5.5  
gi|55770844 catenin, alpha 1 [Homo sapiens]                            27   7.1  
gi|214010216 SMC6 protein [Homo sapiens]                               27   7.1  
gi|13375848 SMC6 protein [Homo sapiens]                                27   7.1  
gi|154759259 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...    27   9.3  
gi|194595509 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...    27   9.3  
gi|109659847 filamin A interacting protein 1-like isoform 3 [Hom...    27   9.3  
gi|109659849 filamin A interacting protein 1-like isoform 2 [Hom...    27   9.3  
gi|109659845 filamin A interacting protein 1-like isoform 1 [Hom...    27   9.3  
gi|20127408 mitochondrial trifunctional protein, alpha subunit p...    27   9.3  
gi|8923417 ADP-ribosylhydrolase like 2 [Homo sapiens]                  27   9.3  
gi|112382252 spectrin, beta, non-erythrocytic 1 isoform 2 [Homo ...    27   9.3  
gi|112382250 spectrin, beta, non-erythrocytic 1 isoform 1 [Homo ...    27   9.3  
gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens]                27   9.3  

>gi|113422056 PREDICTED: similar to nuclear DNA-binding protein
           [Homo sapiens]
          Length = 157

 Score =  310 bits (793), Expect = 4e-85
 Identities = 157/157 (100%), Positives = 157/157 (100%)

Query: 1   MHSFQETGVKGRASAIRAAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELL 60
           MHSFQETGVKGRASAIRAAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELL
Sbjct: 1   MHSFQETGVKGRASAIRAAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELL 60

Query: 61  QKLDPLEQAKVDLVSAYILNSMFWAYLATQGVNPKEHSVKQELERIRVYMNRVKEIADKK 120
           QKLDPLEQAKVDLVSAYILNSMFWAYLATQGVNPKEHSVKQELERIRVYMNRVKEIADKK
Sbjct: 61  QKLDPLEQAKVDLVSAYILNSMFWAYLATQGVNPKEHSVKQELERIRVYMNRVKEIADKK 120

Query: 121 KAGKLDRGAASRFVRNALWEPKPKNASKVAYKGKSKS 157
           KAGKLDRGAASRFVRNALWEPKPKNASKVAYKGKSKS
Sbjct: 121 KAGKLDRGAASRFVRNALWEPKPKNASKVAYKGKSKS 157


>gi|113421639 PREDICTED: similar to nuclear DNA-binding protein
           [Homo sapiens]
          Length = 157

 Score =  310 bits (793), Expect = 4e-85
 Identities = 157/157 (100%), Positives = 157/157 (100%)

Query: 1   MHSFQETGVKGRASAIRAAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELL 60
           MHSFQETGVKGRASAIRAAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELL
Sbjct: 1   MHSFQETGVKGRASAIRAAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELL 60

Query: 61  QKLDPLEQAKVDLVSAYILNSMFWAYLATQGVNPKEHSVKQELERIRVYMNRVKEIADKK 120
           QKLDPLEQAKVDLVSAYILNSMFWAYLATQGVNPKEHSVKQELERIRVYMNRVKEIADKK
Sbjct: 61  QKLDPLEQAKVDLVSAYILNSMFWAYLATQGVNPKEHSVKQELERIRVYMNRVKEIADKK 120

Query: 121 KAGKLDRGAASRFVRNALWEPKPKNASKVAYKGKSKS 157
           KAGKLDRGAASRFVRNALWEPKPKNASKVAYKGKSKS
Sbjct: 121 KAGKLDRGAASRFVRNALWEPKPKNASKVAYKGKSKS 157


>gi|239755365 PREDICTED: similar to hCG1791993 [Homo sapiens]
          Length = 141

 Score =  268 bits (685), Expect = 1e-72
 Identities = 135/140 (96%), Positives = 136/140 (97%)

Query: 18  AAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLVSAY 77
           AAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLVSAY
Sbjct: 2   AAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLVSAY 61

Query: 78  ILNSMFWAYLATQGVNPKEHSVKQELERIRVYMNRVKEIADKKKAGKLDRGAASRFVRNA 137
            LNSMFW YLATQGVNPKEH VKQELERIRVYMNRVKEI DKKKAGKLDRGAASRFVRNA
Sbjct: 62  TLNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVRNA 121

Query: 138 LWEPKPKNASKVAYKGKSKS 157
           LWEPKPKNASKVA+KGKSKS
Sbjct: 122 LWEPKPKNASKVAHKGKSKS 141


>gi|169198899 PREDICTED: similar to hCG1791993 [Homo sapiens]
          Length = 142

 Score =  268 bits (685), Expect = 1e-72
 Identities = 135/140 (96%), Positives = 136/140 (97%)

Query: 18  AAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLVSAY 77
           AAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLVSAY
Sbjct: 3   AAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLVSAY 62

Query: 78  ILNSMFWAYLATQGVNPKEHSVKQELERIRVYMNRVKEIADKKKAGKLDRGAASRFVRNA 137
            LNSMFW YLATQGVNPKEH VKQELERIRVYMNRVKEI DKKKAGKLDRGAASRFVRNA
Sbjct: 63  TLNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVRNA 122

Query: 138 LWEPKPKNASKVAYKGKSKS 157
           LWEPKPKNASKVA+KGKSKS
Sbjct: 123 LWEPKPKNASKVAHKGKSKS 142


>gi|239744148 PREDICTED: hypothetical protein LOC642538 [Homo
           sapiens]
          Length = 142

 Score =  266 bits (681), Expect = 4e-72
 Identities = 134/140 (95%), Positives = 135/140 (96%)

Query: 18  AAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLVSAY 77
           AAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLVSAY
Sbjct: 3   AAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLVSAY 62

Query: 78  ILNSMFWAYLATQGVNPKEHSVKQELERIRVYMNRVKEIADKKKAGKLDRGAASRFVRNA 137
            LNSMFW YLATQGVNPKEH VKQELERIRVYMNRVKEI DKKKAGKLDRGAASRFVRNA
Sbjct: 63  TLNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVRNA 122

Query: 138 LWEPKPKNASKVAYKGKSKS 157
           LWEPKPKN SKVA+KGKSKS
Sbjct: 123 LWEPKPKNTSKVAHKGKSKS 142


>gi|27894373 nuclear DNA-binding protein [Homo sapiens]
          Length = 141

 Score =  252 bits (644), Expect = 8e-68
 Identities = 128/140 (91%), Positives = 130/140 (92%)

Query: 18  AAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLVSAY 77
           A EEINEDYPVEIH+YLSAF NSI AVDEMLK MMSVSRNELLQKLDPLEQAKVDLVSAY
Sbjct: 2   AGEEINEDYPVEIHEYLSAFENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAY 61

Query: 78  ILNSMFWAYLATQGVNPKEHSVKQELERIRVYMNRVKEIADKKKAGKLDRGAASRFVRNA 137
            LNSMFW YLATQGVNPKEH VKQELERIRVYMNRVKEI DKKKAGKLDRGAASRFV+NA
Sbjct: 62  TLNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNA 121

Query: 138 LWEPKPKNASKVAYKGKSKS 157
           LWEPK KNASKVA KGKSKS
Sbjct: 122 LWEPKSKNASKVANKGKSKS 141


>gi|5453583 nuclear DNA-binding protein [Homo sapiens]
          Length = 141

 Score =  252 bits (644), Expect = 8e-68
 Identities = 128/140 (91%), Positives = 130/140 (92%)

Query: 18  AAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLVSAY 77
           A EEINEDYPVEIH+YLSAF NSI AVDEMLK MMSVSRNELLQKLDPLEQAKVDLVSAY
Sbjct: 2   AGEEINEDYPVEIHEYLSAFENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAY 61

Query: 78  ILNSMFWAYLATQGVNPKEHSVKQELERIRVYMNRVKEIADKKKAGKLDRGAASRFVRNA 137
            LNSMFW YLATQGVNPKEH VKQELERIRVYMNRVKEI DKKKAGKLDRGAASRFV+NA
Sbjct: 62  TLNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNA 121

Query: 138 LWEPKPKNASKVAYKGKSKS 157
           LWEPK KNASKVA KGKSKS
Sbjct: 122 LWEPKSKNASKVANKGKSKS 141


>gi|124249396 coiled-coil domain containing 30 [Homo sapiens]
          Length = 783

 Score = 31.2 bits (69), Expect = 0.38
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 55  SRNELLQKLDPLEQAKVDLVSAYILNSMFWAYLATQGVNPKEHSVKQELERIRVYMNRVK 114
           S  EL +KL  L+Q K  L   Y L  +    +  +  N K H  K +L++++  +    
Sbjct: 465 SNQELSEKLSKLQQEKEALREEY-LRLLKLLNVHVRNYNEKHHQQKVKLQKVKYRLTNEV 523

Query: 115 EIADKK 120
           E+ DK+
Sbjct: 524 ELRDKR 529


>gi|31657092 ATP binding cassette, sub-family A (ABC1), member 13
            [Homo sapiens]
          Length = 5058

 Score = 28.9 bits (63), Expect = 1.9
 Identities = 13/43 (30%), Positives = 27/43 (62%), Gaps = 2/43 (4%)

Query: 22   INEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELLQKLD 64
            I+ED+ + +  Y+S F NS  +V+++L N   +S N+ +  ++
Sbjct: 1071 IDEDFRISLFQYMSQFFNS--SVEDLLDNKCLISDNKHISSVN 1111


>gi|36287110 FGFR1 oncogene partner isoform b [Homo sapiens]
          Length = 379

 Score = 28.5 bits (62), Expect = 2.5
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 5/48 (10%)

Query: 4   FQETGVKGRASAIRAAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNM 51
           F  T  +   S I   EEI ED  VEI D      N+ D +D++ +++
Sbjct: 321 FNSTSHRSEKSEISIGEEIEEDLSVEIDD-----INTSDKLDDLTQDL 363


>gi|5901954 FGFR1 oncogene partner isoform a [Homo sapiens]
          Length = 399

 Score = 28.5 bits (62), Expect = 2.5
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 5/48 (10%)

Query: 4   FQETGVKGRASAIRAAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNM 51
           F  T  +   S I   EEI ED  VEI D      N+ D +D++ +++
Sbjct: 341 FNSTSHRSEKSEISIGEEIEEDLSVEIDD-----INTSDKLDDLTQDL 383


>gi|110611228 utrophin [Homo sapiens]
          Length = 3433

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 32   DYLSAFANSIDAVDEMLKNMMSVSRN 57
            D  SAF N I+ ++  LKNM  +  N
Sbjct: 1057 DQCSAFVNEIETIESSLKNMKEIETN 1082


>gi|55770846 catenin, alpha 2 [Homo sapiens]
          Length = 905

 Score = 27.3 bits (59), Expect = 5.5
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 4/79 (5%)

Query: 3   SFQETGVKGRASAIRAAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELLQK 62
           SF ET V      I AA+  NE    E+ +Y   F    + + E+     S+S NE   K
Sbjct: 391 SFLETNVP-LLVLIEAAKSGNEK---EVKEYAQVFREHANKLVEVANLACSISNNEEGVK 446

Query: 63  LDPLEQAKVDLVSAYILNS 81
           L  +   ++D +   ++N+
Sbjct: 447 LVRMAATQIDSLCPQVINA 465


>gi|223718250 plastin 1 [Homo sapiens]
          Length = 629

 Score = 27.3 bits (59), Expect = 5.5
 Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 18/109 (16%)

Query: 47  MLKNMMSVSRNELLQKLDPLEQAKVD---LVSAYILNSMFWAYLATQGVNPKEHSVKQEL 103
           M  +  ++SR EL +  +   +  +D    VS Y L  +F           KE S+    
Sbjct: 1   MENSTTTISREELEELQEAFNKIDIDNSGYVSDYELQDLF-----------KEASLPLPG 49

Query: 104 ERIRVYMNRVKEIADKKKAGKLDRGAASRFVRNALWEPKPKNASKVAYK 152
            ++R  + ++  +AD  K GK+   +   FV + + E K K+ SK   K
Sbjct: 50  YKVREIVEKILSVADSNKDGKI---SFEEFV-SLMQELKSKDISKTFRK 94


>gi|223718246 plastin 1 [Homo sapiens]
          Length = 629

 Score = 27.3 bits (59), Expect = 5.5
 Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 18/109 (16%)

Query: 47  MLKNMMSVSRNELLQKLDPLEQAKVD---LVSAYILNSMFWAYLATQGVNPKEHSVKQEL 103
           M  +  ++SR EL +  +   +  +D    VS Y L  +F           KE S+    
Sbjct: 1   MENSTTTISREELEELQEAFNKIDIDNSGYVSDYELQDLF-----------KEASLPLPG 49

Query: 104 ERIRVYMNRVKEIADKKKAGKLDRGAASRFVRNALWEPKPKNASKVAYK 152
            ++R  + ++  +AD  K GK+   +   FV + + E K K+ SK   K
Sbjct: 50  YKVREIVEKILSVADSNKDGKI---SFEEFV-SLMQELKSKDISKTFRK 94


>gi|55770844 catenin, alpha 1 [Homo sapiens]
          Length = 906

 Score = 26.9 bits (58), Expect = 7.1
 Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 7/117 (5%)

Query: 3   SFQETGVKGRASAIRAAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELLQK 62
           SF ET V      I AA+  NE    E+ +Y   F    + + E+     S+S NE   K
Sbjct: 393 SFLETNVP-LLVLIEAAKNGNEK---EVKEYAQVFREHANKLIEVANLACSISNNEEGVK 448

Query: 63  LDPLEQAKVDLVSAYILNSMFWAYLATQGVNPKEHS--VKQELER-IRVYMNRVKEI 116
           L  +  ++++ +   ++N+        Q    +E+    K++ E+ +RV  + V +I
Sbjct: 449 LVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDI 505


>gi|214010216 SMC6 protein [Homo sapiens]
          Length = 1091

 Score = 26.9 bits (58), Expect = 7.1
 Identities = 29/133 (21%), Positives = 52/133 (39%), Gaps = 13/133 (9%)

Query: 17  RAAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLVSA 76
           RA  E    Y   +++Y      ++   DE L   +   +    Q L+P    +   +S 
Sbjct: 358 RAYNEAEVLYNRSLNEY-----KALKKDDEQLCKRIEELKKSTDQSLEPERLERQKKIS- 411

Query: 77  YILNSMFWAYLATQGVNPKEHSVKQELERIRVYMNRVKEIADKKKAGKLDRGAASRFVRN 136
                  W     +    +E+SV QE+E+ +  + + KE   K K  +LD   A  + + 
Sbjct: 412 -------WLKERVKAFQNQENSVNQEIEQFQQAIEKDKEEHGKIKREELDVKHALSYNQR 464

Query: 137 ALWEPKPKNASKV 149
            L E K     ++
Sbjct: 465 QLKELKDSKTDRL 477


>gi|13375848 SMC6 protein [Homo sapiens]
          Length = 1091

 Score = 26.9 bits (58), Expect = 7.1
 Identities = 29/133 (21%), Positives = 52/133 (39%), Gaps = 13/133 (9%)

Query: 17  RAAEEINEDYPVEIHDYLSAFANSIDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLVSA 76
           RA  E    Y   +++Y      ++   DE L   +   +    Q L+P    +   +S 
Sbjct: 358 RAYNEAEVLYNRSLNEY-----KALKKDDEQLCKRIEELKKSTDQSLEPERLERQKKIS- 411

Query: 77  YILNSMFWAYLATQGVNPKEHSVKQELERIRVYMNRVKEIADKKKAGKLDRGAASRFVRN 136
                  W     +    +E+SV QE+E+ +  + + KE   K K  +LD   A  + + 
Sbjct: 412 -------WLKERVKAFQNQENSVNQEIEQFQQAIEKDKEEHGKIKREELDVKHALSYNQR 464

Query: 137 ALWEPKPKNASKV 149
            L E K     ++
Sbjct: 465 QLKELKDSKTDRL 477


>gi|154759259 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)
            isoform 2 [Homo sapiens]
          Length = 2472

 Score = 26.6 bits (57), Expect = 9.3
 Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 8/83 (9%)

Query: 8    GVKGRASAIRAAEEIN-EDYPVEIHDY----LSAFANSIDAVDEMLKNMMS---VSRNEL 59
            G++G  S+   A+++   +  +E H      + A A +  A ++  + +++    +  E+
Sbjct: 1357 GIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEI 1416

Query: 60   LQKLDPLEQAKVDLVSAYILNSM 82
             QKLD L+Q + DL  A++   M
Sbjct: 1417 KQKLDILDQERADLEKAWVQRRM 1439


>gi|194595509 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)
            isoform 1 [Homo sapiens]
          Length = 2477

 Score = 26.6 bits (57), Expect = 9.3
 Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 8/83 (9%)

Query: 8    GVKGRASAIRAAEEIN-EDYPVEIHDY----LSAFANSIDAVDEMLKNMMS---VSRNEL 59
            G++G  S+   A+++   +  +E H      + A A +  A ++  + +++    +  E+
Sbjct: 1357 GIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEI 1416

Query: 60   LQKLDPLEQAKVDLVSAYILNSM 82
             QKLD L+Q + DL  A++   M
Sbjct: 1417 KQKLDILDQERADLEKAWVQRRM 1439


>gi|109659847 filamin A interacting protein 1-like isoform 3 [Homo
           sapiens]
          Length = 1133

 Score = 26.6 bits (57), Expect = 9.3
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 1/80 (1%)

Query: 39  NSIDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLVSAYILNSMFWAYLATQGVNPKEHS 98
           N + A +E   +++S   N L  +L  LE  + D +   +      +  A    N K   
Sbjct: 569 NKLKAEEEKGNDLLS-RVNMLKNRLQSLEAIEKDFLKNKLNQDSGKSTTALHQENNKIKE 627

Query: 99  VKQELERIRVYMNRVKEIAD 118
           + QE+ER+++ +  +K I D
Sbjct: 628 LSQEVERLKLKLKDMKAIED 647


>gi|109659849 filamin A interacting protein 1-like isoform 2 [Homo
           sapiens]
          Length = 893

 Score = 26.6 bits (57), Expect = 9.3
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 1/80 (1%)

Query: 39  NSIDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLVSAYILNSMFWAYLATQGVNPKEHS 98
           N + A +E   +++S   N L  +L  LE  + D +   +      +  A    N K   
Sbjct: 329 NKLKAEEEKGNDLLS-RVNMLKNRLQSLEAIEKDFLKNKLNQDSGKSTTALHQENNKIKE 387

Query: 99  VKQELERIRVYMNRVKEIAD 118
           + QE+ER+++ +  +K I D
Sbjct: 388 LSQEVERLKLKLKDMKAIED 407


>gi|109659845 filamin A interacting protein 1-like isoform 1 [Homo
           sapiens]
          Length = 1135

 Score = 26.6 bits (57), Expect = 9.3
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 1/80 (1%)

Query: 39  NSIDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLVSAYILNSMFWAYLATQGVNPKEHS 98
           N + A +E   +++S   N L  +L  LE  + D +   +      +  A    N K   
Sbjct: 569 NKLKAEEEKGNDLLS-RVNMLKNRLQSLEAIEKDFLKNKLNQDSGKSTTALHQENNKIKE 627

Query: 99  VKQELERIRVYMNRVKEIAD 118
           + QE+ER+++ +  +K I D
Sbjct: 628 LSQEVERLKLKLKDMKAIED 647


>gi|20127408 mitochondrial trifunctional protein, alpha subunit
           precursor [Homo sapiens]
          Length = 763

 Score = 26.6 bits (57), Expect = 9.3
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 91  GVNPKEHSVKQELERIRVYMNRVKEIADKKKAGKLDRGAASRFVRNALWEP 141
           G+ P E    + LE + +     K +ADKK + K D+G   +    A+  P
Sbjct: 228 GLKPPEERTIEYLEEVAITF--AKGLADKKISPKRDKGLVEKLTAYAMTIP 276


>gi|8923417 ADP-ribosylhydrolase like 2 [Homo sapiens]
          Length = 363

 Score = 26.6 bits (57), Expect = 9.3
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 86  YLATQGVNPKEHSVKQELERIRVYMNRVKEIADKKKAGKLDRGAASR 132
           +LA QG +  EH +KQ L  +       + + D ++ G  +R  +SR
Sbjct: 199 HLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEERPYSSR 245


>gi|112382252 spectrin, beta, non-erythrocytic 1 isoform 2 [Homo
           sapiens]
          Length = 2155

 Score = 26.6 bits (57), Expect = 9.3
 Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 5/85 (5%)

Query: 41  IDAVDEMLKNMMSVSRNELLQ----KLDPLEQAKVDLVSAYILNSMFWAYLATQGVNPKE 96
           ID  ++ L NM    + E L+    + + LE    +  S   + +     L   G +P E
Sbjct: 852 IDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIARQLMHSG-HPSE 910

Query: 97  HSVKQELERIRVYMNRVKEIADKKK 121
             +K + +++    ++ +E+ D+KK
Sbjct: 911 KEIKAQQDKLNTRWSQFRELVDRKK 935


>gi|112382250 spectrin, beta, non-erythrocytic 1 isoform 1 [Homo
           sapiens]
          Length = 2364

 Score = 26.6 bits (57), Expect = 9.3
 Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 5/85 (5%)

Query: 41  IDAVDEMLKNMMSVSRNELLQ----KLDPLEQAKVDLVSAYILNSMFWAYLATQGVNPKE 96
           ID  ++ L NM    + E L+    + + LE    +  S   + +     L   G +P E
Sbjct: 865 IDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIARQLMHSG-HPSE 923

Query: 97  HSVKQELERIRVYMNRVKEIADKKK 121
             +K + +++    ++ +E+ D+KK
Sbjct: 924 KEIKAQQDKLNTRWSQFRELVDRKK 948


>gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens]
          Length = 600

 Score = 26.6 bits (57), Expect = 9.3
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 5/38 (13%)

Query: 91  GVNPKEHSVKQELERIRVYMNRVKEIADKKKAGKLDRG 128
           G  PKE  + + +++      RV+   DKK+AGK  RG
Sbjct: 146 GEKPKEEKIIRGIDK-----GRVRAAVDKKEAGKDGRG 178


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.127    0.352 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,816,535
Number of Sequences: 37866
Number of extensions: 164616
Number of successful extensions: 440
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 426
Number of HSP's gapped (non-prelim): 33
length of query: 157
length of database: 18,247,518
effective HSP length: 94
effective length of query: 63
effective length of database: 14,688,114
effective search space: 925351182
effective search space used: 925351182
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.