Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NOX4 Sequence: fasta or formatted (578aa) NCBI GI: 8393843
Description:

NADPH oxidase 4 isoform a

Referenced in:

Superoxide Pathway

Other entries for this name:
alt prot [538aa] NADPH oxidase 4 isoform b
alt prot [554aa] NADPH oxidase 4 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         23           2
 C cysteine            3.1         18           2
 D aspartate           3.1         18           2
 E glutamate           4.7         27           2
 F phenylalanine       6.6         38           2
 G glycine             5.0         29           2
 H histidine           3.3         19           1
 I isoleucine          5.5         32           2
 K lysine              4.5         26           1
 L leucine            12.5         72           3
 M methionine          2.1         12           1
 N asparagine          5.4         31           2
 P proline             5.4         31           2
 Q glutamine           2.9         17           1
 R arginine            5.7         33           2
 S serine              8.0         46           2
 T threonine           5.5         32           2
 V valine              5.9         34           3
 W tryptophan          2.2         13           1
 Y tyrosine            4.7         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NADPH oxidase 4 isoform a 
NOX4                  0.955   NADPH oxidase 4 isoform c 
NOX4                  0.915   NADPH oxidase 4 isoform b 
CYBB                  0.299   cytochrome b-245 beta polypeptide 
NOX3                  0.281   NADPH oxidase 3 
NOX1                  0.279   NADPH oxidase 1 isoform long 
NOX1                  0.245   NADPH oxidase 1 isoform long variant 
DUOX1                 0.105   dual oxidase 1 precursor 
DUOX1                 0.105   dual oxidase 1 precursor 
DUOX2                 0.101   dual oxidase 2 precursor 
NOX5                  0.080   NADPH oxidase, EF-hand calcium binding domain 5 [Hom...
CPB2                  0.004   plasma carboxypeptidase B2 isoform b 
ZNF451                0.004   zinc finger protein 451 isoform 2 
ZNF451                0.004   zinc finger protein 451 isoform 1 
CYB5RL                0.004   cytochrome b5 reductase-like 
GPR180                0.004   G protein-coupled receptor 180 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press