Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NOX5 Sequence: fasta or formatted (747aa) NCBI GI: 20127624
Description:

NADPH oxidase, EF-hand calcium binding domain 5

Referenced in:

Calmodulin and Calcium
Superoxide Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         61           2
 C cysteine            2.1         16           1
 D aspartate           3.9         29           1
 E glutamate           5.2         39           2
 F phenylalanine       6.2         46           2
 G glycine             6.7         50           1
 H histidine           3.6         27           1
 I isoleucine          5.1         38           1
 K lysine              5.0         37           2
 L leucine            12.4         93           7
 M methionine          2.3         17           1
 N asparagine          2.1         16           1
 P proline             4.3         32           2
 Q glutamine           5.0         37           2
 R arginine            5.9         44           2
 S serine              7.2         54           3
 T threonine           5.0         37           2
 V valine              5.0         37           3
 W tryptophan          2.8         21           1
 Y tyrosine            2.1         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NADPH oxidase, EF-hand calcium binding domain 5 [Hom... 
DUOX2                 0.148   dual oxidase 2 precursor 
DUOX1                 0.137   dual oxidase 1 precursor 
DUOX1                 0.137   dual oxidase 1 precursor 
NOX1                  0.135   NADPH oxidase 1 isoform long 
CYBB                  0.126   cytochrome b-245 beta polypeptide 
NOX3                  0.122   NADPH oxidase 3 
NOX1                  0.100   NADPH oxidase 1 isoform long variant 
NOX4                  0.062   NADPH oxidase 4 isoform c 
NOX4                  0.062   NADPH oxidase 4 isoform a 
NOX4                  0.029   NADPH oxidase 4 isoform b 
GUCA1A                0.027   guanylate cyclase activator 1A (retina) 
PPP3R1                0.020   protein phosphatase 3, regulatory subunit B, alpha is...
NCALD                 0.017   neurocalcin delta 
NCALD                 0.017   neurocalcin delta 
NCALD                 0.017   neurocalcin delta 
NCALD                 0.017   neurocalcin delta 
NCALD                 0.017   neurocalcin delta 
NCALD                 0.017   neurocalcin delta 
NCALD                 0.017   neurocalcin delta 
NCALD                 0.017   neurocalcin delta 
HPCAL1                0.015   hippocalcin-like 1 
HPCAL1                0.015   hippocalcin-like 1 
GUCA1B                0.015   guanylate cyclase activator 1B (retina) 
EFCAB1                0.015   EF-hand calcium binding domain 1 isoform a 
HPCA                  0.014   hippocalcin 
LPCAT1                0.013   lysophosphatidylcholine acyltransferase 1 
KCNIP3                0.013   Kv channel interacting protein 3 isoform 2 
KCNIP3                0.013   Kv channel interacting protein 3 isoform 1 
PPP3R2                0.013   protein phosphatase 3 regulatory subunit B, beta iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press