Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NOX1 Sequence: fasta or formatted (515aa) NCBI GI: 7669510
Description:

NADPH oxidase 1 isoform long variant

Referenced in:

Superoxide Pathway

Other entries for this name:
alt prot [564aa] NADPH oxidase 1 isoform long
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         30           2
 C cysteine            2.9         15           2
 D aspartate           3.5         18           2
 E glutamate           4.9         25           2
 F phenylalanine       7.2         37           2
 G glycine             5.6         29           2
 H histidine           3.9         20           2
 I isoleucine          6.8         35           2
 K lysine              5.4         28           2
 L leucine             9.7         50           2
 M methionine          1.9         10           1
 N asparagine          3.7         19           1
 P proline             3.7         19           2
 Q glutamine           2.7         14           2
 R arginine            5.4         28           2
 S serine              8.2         42           2
 T threonine           6.0         31           2
 V valine              6.8         35           2
 W tryptophan          2.3         12           1
 Y tyrosine            3.5         18           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NADPH oxidase 1 isoform long variant 
NOX1                  0.978   NADPH oxidase 1 isoform long 
CYBB                  0.545   cytochrome b-245 beta polypeptide 
NOX3                  0.526   NADPH oxidase 3 
NOX4                  0.278   NADPH oxidase 4 isoform a 
NOX4                  0.265   NADPH oxidase 4 isoform c 
NOX4                  0.241   NADPH oxidase 4 isoform b 
DUOX1                 0.175   dual oxidase 1 precursor 
DUOX1                 0.175   dual oxidase 1 precursor 
DUOX2                 0.160   dual oxidase 2 precursor 
NOX5                  0.145   NADPH oxidase, EF-hand calcium binding domain 5 [Hom...
PTPRE                 0.007   protein tyrosine phosphatase, receptor type, E isofor...
FAM22D                0.006   hypothetical protein LOC728130 
FAM22A                0.006   hypothetical protein LOC728118 
TAS2R30               0.005   type 2 taste receptor member 30 
DPP3                  0.005   dipeptidyl peptidase III 
DPP3                  0.005   dipeptidyl peptidase III 
CYB5RL                0.004   cytochrome b5 reductase-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press