GKAP1 11858

Name: GKAP1	Sequence: fasta or formatted (366aa)		NCBI GI: 20127642
Description: G kinase anchoring protein 1 isoform a		Not currently referenced in the text
Other entries for this name: alt prot {315aa} G kinase anchoring protein 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 21 2 C cysteine 0.8 3 1 D aspartate 5.5 20 2 E glutamate 11.7 43 2 F phenylalanine 1.6 6 2 G glycine 4.4 16 2 H histidine 3.0 11 1 I isoleucine 2.7 10 1 K lysine 12.6 46 3 L leucine 9.8 36 3 M methionine 1.4 5 1 N asparagine 4.9 18 1 P proline 1.6 6 1 Q glutamine 7.4 27 3 R arginine 6.3 23 2 S serine 9.0 33 3 T threonine 4.9 18 2 V valine 4.4 16 2 W tryptophan 0.8 3 1 Y tyrosine 1.4 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 G kinase anchoring protein 1 isoform a GKAP1 0.814 G kinase anchoring protein 1 isoform b MYH11 0.042 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.042 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.042 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.042 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CEP164 0.042 centrosomal protein 164kDa MYH6 0.040 myosin heavy chain 6 MAP1A 0.039 microtubule-associated protein 1A TPR 0.037 nuclear pore complex-associated protein TPR CCDC41 0.037 NY-REN-58 antigen CCDC41 0.037 NY-REN-58 antigen PMFBP1 0.036 polyamine modulated factor 1 binding protein 1 isof... PMFBP1 0.036 polyamine modulated factor 1 binding protein 1 isof... MYH13 0.036 myosin, heavy polypeptide 13, skeletal muscle [Homo... CCDC102B 0.036 coiled-coil domain containing 102B CCDC102B 0.036 coiled-coil domain containing 102B ROCK2 0.036 Rho-associated, coiled-coil containing protein kinas... ROCK1 0.035 Rho-associated, coiled-coil containing protein kinase... LOC100133599 0.035 PREDICTED: hypothetical protein PLEC1 0.033 plectin 1 isoform 11 PLEC1 0.033 plectin 1 isoform 10 PLEC1 0.033 plectin 1 isoform 8 PLEC1 0.033 plectin 1 isoform 7 PLEC1 0.033 plectin 1 isoform 6 PLEC1 0.033 plectin 1 isoform 3 PLEC1 0.033 plectin 1 isoform 2 PLEC1 0.033 plectin 1 isoform 1 CALD1 0.033 caldesmon 1 isoform 4 CALD1 0.033 caldesmon 1 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.