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Search of human proteins with 199560438
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|199560438 hypothetical protein LOC283643 isoform 2 [Homo
sapiens]
(393 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|199560438 hypothetical protein LOC283643 isoform 2 [Homo sapi... 790 0.0
gi|199560355 hypothetical protein LOC283643 isoform 1 [Homo sapi... 773 0.0
gi|199560536 hypothetical protein LOC283643 isoform 4 [Homo sapi... 696 0.0
gi|112382239 desmuslin isoform B [Homo sapiens] 41 0.002
gi|112382237 desmuslin isoform A [Homo sapiens] 41 0.002
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap... 40 0.005
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap... 40 0.005
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap... 40 0.005
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi... 40 0.005
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 37 0.031
gi|169203406 PREDICTED: hypothetical protein [Homo sapiens] 36 0.053
gi|169202578 PREDICTED: hypothetical protein [Homo sapiens] 36 0.053
gi|157785645 SPEG complex locus [Homo sapiens] 35 0.090
gi|197382472 actin filament associated protein 1 isoform a [Homo... 34 0.26
gi|40807504 actin filament associated protein 1 [Homo sapiens] 34 0.26
gi|115583657 hypothetical protein LOC150368 [Homo sapiens] 33 0.34
gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 33 0.58
gi|226495417 coiled-coil domain containing 102A [Homo sapiens] 32 0.76
gi|169214061 PREDICTED: hypothetical protein [Homo sapiens] 32 0.76
gi|169214437 PREDICTED: hypothetical protein [Homo sapiens] 32 0.76
gi|169213353 PREDICTED: hypothetical protein [Homo sapiens] 32 0.76
gi|208022661 hypothetical protein LOC57701 [Homo sapiens] 32 0.99
gi|30039694 zinc finger protein 598 [Homo sapiens] 32 0.99
gi|21735548 centrosomal protein 2 [Homo sapiens] 32 1.3
gi|157738667 FYVE and coiled-coil domain containing 1 [Homo sapi... 31 1.7
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 31 1.7
gi|11321642 bromodomain containing protein 1 [Homo sapiens] 31 1.7
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 31 2.2
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 31 2.2
gi|40068479 mitochondrial rRNA methyltransferase 1 homolog [Homo... 31 2.2
>gi|199560438 hypothetical protein LOC283643 isoform 2 [Homo
sapiens]
Length = 393
Score = 790 bits (2040), Expect = 0.0
Identities = 393/393 (100%), Positives = 393/393 (100%)
Query: 1 MGRRRQRVDPAAGARAGALPEAIAALSRSLPSGPSPEIFRRAKFDRPEATSALWQLLFRV 60
MGRRRQRVDPAAGARAGALPEAIAALSRSLPSGPSPEIFRRAKFDRPEATSALWQLLFRV
Sbjct: 1 MGRRRQRVDPAAGARAGALPEAIAALSRSLPSGPSPEIFRRAKFDRPEATSALWQLLFRV 60
Query: 61 LSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPEDGSQGSRELLLALSWLLAR 120
LSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPEDGSQGSRELLLALSWLLAR
Sbjct: 61 LSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPEDGSQGSRELLLALSWLLAR 120
Query: 121 GPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDVRHVQWLMGKLRFRWR 180
GPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDVRHVQWLMGKLRFRWR
Sbjct: 121 GPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDVRHVQWLMGKLRFRWR 180
Query: 181 QLVSSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTCAPEVPAAAS 240
QLVSSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTCAPEVPAAAS
Sbjct: 181 QLVSSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTCAPEVPAAAS 240
Query: 241 QPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAAWEAKAGGCGRGPEWSAARRA 300
QPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAAWEAKAGGCGRGPEWSAARRA
Sbjct: 241 QPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAAWEAKAGGCGRGPEWSAARRA 300
Query: 301 SREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGDRDLRAAVVIRTLRSQEACL 360
SREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGDRDLRAAVVIRTLRSQEACL
Sbjct: 301 SREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGDRDLRAAVVIRTLRSQEACL 360
Query: 361 EAVLRRLQGQCRQELARLVGARPGLIWIPPPGR 393
EAVLRRLQGQCRQELARLVGARPGLIWIPPPGR
Sbjct: 361 EAVLRRLQGQCRQELARLVGARPGLIWIPPPGR 393
>gi|199560355 hypothetical protein LOC283643 isoform 1 [Homo
sapiens]
Length = 426
Score = 773 bits (1996), Expect = 0.0
Identities = 393/426 (92%), Positives = 393/426 (92%), Gaps = 33/426 (7%)
Query: 1 MGRRRQRVDPAAGARAGALPEAIAALSRSLPSGPSPEIFRRAKFDRPEATSALWQLLFRV 60
MGRRRQRVDPAAGARAGALPEAIAALSRSLPSGPSPEIFRRAKFDRPEATSALWQLLFRV
Sbjct: 1 MGRRRQRVDPAAGARAGALPEAIAALSRSLPSGPSPEIFRRAKFDRPEATSALWQLLFRV 60
Query: 61 LSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPEDGSQGSRELLLALSWLLAR 120
LSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPEDGSQGSRELLLALSWLLAR
Sbjct: 61 LSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPEDGSQGSRELLLALSWLLAR 120
Query: 121 GPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDVRHVQWLMGKLRFRWR 180
GPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDVRHVQWLMGKLRFRWR
Sbjct: 121 GPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDVRHVQWLMGKLRFRWR 180
Query: 181 QLVSSQQEQCALLSK---------------------------------LLRTLERENQRL 207
QLVSSQQEQCALLSK LLRTLERENQRL
Sbjct: 181 QLVSSQQEQCALLSKIHLYTRGCHSDQSLSHLSVTEAEMLRDPEGGQQLLRTLERENQRL 240
Query: 208 EAVLAWRRSELVFWRWMDTVLGTCAPEVPAAASQPTFLPWVPERGGGELDLVVRELQALE 267
EAVLAWRRSELVFWRWMDTVLGTCAPEVPAAASQPTFLPWVPERGGGELDLVVRELQALE
Sbjct: 241 EAVLAWRRSELVFWRWMDTVLGTCAPEVPAAASQPTFLPWVPERGGGELDLVVRELQALE 300
Query: 268 EELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHG 327
EELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHG
Sbjct: 301 EELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHG 360
Query: 328 PHRLVRREDGAAGDRDLRAAVVIRTLRSQEACLEAVLRRLQGQCRQELARLVGARPGLIW 387
PHRLVRREDGAAGDRDLRAAVVIRTLRSQEACLEAVLRRLQGQCRQELARLVGARPGLIW
Sbjct: 361 PHRLVRREDGAAGDRDLRAAVVIRTLRSQEACLEAVLRRLQGQCRQELARLVGARPGLIW 420
Query: 388 IPPPGR 393
IPPPGR
Sbjct: 421 IPPPGR 426
>gi|199560536 hypothetical protein LOC283643 isoform 4 [Homo
sapiens]
Length = 352
Score = 696 bits (1797), Expect = 0.0
Identities = 345/348 (99%), Positives = 346/348 (99%)
Query: 46 RPEATSALWQLLFRVLSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPEDGSQ 105
R + TSALWQLLFRVLSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPEDGSQ
Sbjct: 5 RGDWTSALWQLLFRVLSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPEDGSQ 64
Query: 106 GSRELLLALSWLLARGPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDV 165
GSRELLLALSWLLARGPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDV
Sbjct: 65 GSRELLLALSWLLARGPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDV 124
Query: 166 RHVQWLMGKLRFRWRQLVSSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMD 225
RHVQWLMGKLRFRWRQLVSSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMD
Sbjct: 125 RHVQWLMGKLRFRWRQLVSSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMD 184
Query: 226 TVLGTCAPEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAAWEAKA 285
TVLGTCAPEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAAWEAKA
Sbjct: 185 TVLGTCAPEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAAWEAKA 244
Query: 286 GGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGDRDLR 345
GGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGDRDLR
Sbjct: 245 GGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGDRDLR 304
Query: 346 AAVVIRTLRSQEACLEAVLRRLQGQCRQELARLVGARPGLIWIPPPGR 393
AAVVIRTLRSQEACLEAVLRRLQGQCRQELARLVGARPGLIWIPPPGR
Sbjct: 305 AAVVIRTLRSQEACLEAVLRRLQGQCRQELARLVGARPGLIWIPPPGR 352
>gi|112382239 desmuslin isoform B [Homo sapiens]
Length = 1253
Score = 41.2 bits (95), Expect = 0.002
Identities = 41/120 (34%), Positives = 52/120 (43%), Gaps = 13/120 (10%)
Query: 197 LRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTCAPEVPAAASQPTFLPWVPERGGGEL 256
+R LEREN LE L RR W CA E + Q L W GE
Sbjct: 29 VRELERENLLLEEELRGRRGREGLWAEGQA---RCAEEARSLRQQLDELSWATALAEGER 85
Query: 257 DLV---VRELQALEEELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGALQ 313
D + +RELQ L+ E R A R +A+ G R + + RA+ EA+ LG LQ
Sbjct: 86 DALRRELRELQRLDAEERAA----RGRLDAELGAQQRELQEALGARAALEAL---LGRLQ 138
>gi|112382237 desmuslin isoform A [Homo sapiens]
Length = 1565
Score = 41.2 bits (95), Expect = 0.002
Identities = 41/120 (34%), Positives = 52/120 (43%), Gaps = 13/120 (10%)
Query: 197 LRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTCAPEVPAAASQPTFLPWVPERGGGEL 256
+R LEREN LE L RR W CA E + Q L W GE
Sbjct: 29 VRELERENLLLEEELRGRRGREGLWAEGQA---RCAEEARSLRQQLDELSWATALAEGER 85
Query: 257 DLV---VRELQALEEELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGALQ 313
D + +RELQ L+ E R A R +A+ G R + + RA+ EA+ LG LQ
Sbjct: 86 DALRRELRELQRLDAEERAA----RGRLDAELGAQQRELQEALGARAALEAL---LGRLQ 138
>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
sapiens]
Length = 1293
Score = 39.7 bits (91), Expect = 0.005
Identities = 73/277 (26%), Positives = 109/277 (39%), Gaps = 55/277 (19%)
Query: 134 PLGDEMTVCQCEALASPGP-PAPHM------------EAEGPVDVRHVQWLMGKLRFRWR 180
PLGD M + SPGP P PHM E ++H+Q+ ++ ++
Sbjct: 573 PLGDIMKMWG-RVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYA 631
Query: 181 QLV---------SSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTC 231
Q++ S QQ+Q ALL + +TL+ + + RS V DT
Sbjct: 632 QVLAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSV----PDT---GS 684
Query: 232 APEVPAAASQPTFLPWVPERGGGELDL---------VVRELQALEEELREAAERRRAAWE 282
E+ ASQPT W GG DL + +LQ LE+ E+ R E
Sbjct: 685 IWELQPTASQPTV--W---EGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAE 739
Query: 283 AKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGDR 342
+A + E R+ ++E+ QQ ER + L RR+ A R
Sbjct: 740 MRA----KREEEERKRQEELRRQQEEILRRQQEEER-----KRREEEELARRKQEEALRR 790
Query: 343 DLRAAVVIRTLRSQE--ACLEAVLRRLQGQCRQELAR 377
+ +R R +E E LRRL+ + R+E R
Sbjct: 791 QREQEIALRRQREEEERQQQEEALRRLEERRREEEER 827
>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo
sapiens]
Length = 1320
Score = 39.7 bits (91), Expect = 0.005
Identities = 73/277 (26%), Positives = 109/277 (39%), Gaps = 55/277 (19%)
Query: 134 PLGDEMTVCQCEALASPGP-PAPHM------------EAEGPVDVRHVQWLMGKLRFRWR 180
PLGD M + SPGP P PHM E ++H+Q+ ++ ++
Sbjct: 600 PLGDIMKMWG-RVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYA 658
Query: 181 QLV---------SSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTC 231
Q++ S QQ+Q ALL + +TL+ + + RS V DT
Sbjct: 659 QVLAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSV----PDT---GS 711
Query: 232 APEVPAAASQPTFLPWVPERGGGELDL---------VVRELQALEEELREAAERRRAAWE 282
E+ ASQPT W GG DL + +LQ LE+ E+ R E
Sbjct: 712 IWELQPTASQPTV--W---EGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAE 766
Query: 283 AKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGDR 342
+A + E R+ ++E+ QQ ER + L RR+ A R
Sbjct: 767 MRA----KREEEERKRQEELRRQQEEILRRQQEEER-----KRREEEELARRKQEEALRR 817
Query: 343 DLRAAVVIRTLRSQE--ACLEAVLRRLQGQCRQELAR 377
+ +R R +E E LRRL+ + R+E R
Sbjct: 818 QREQEIALRRQREEEERQQQEEALRRLEERRREEEER 854
>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 39.7 bits (91), Expect = 0.005
Identities = 73/277 (26%), Positives = 109/277 (39%), Gaps = 55/277 (19%)
Query: 134 PLGDEMTVCQCEALASPGP-PAPHM------------EAEGPVDVRHVQWLMGKLRFRWR 180
PLGD M + SPGP P PHM E ++H+Q+ ++ ++
Sbjct: 579 PLGDIMKMWG-RVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYA 637
Query: 181 QLV---------SSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTC 231
Q++ S QQ+Q ALL + +TL+ + + RS V DT
Sbjct: 638 QVLAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSV----PDT---GS 690
Query: 232 APEVPAAASQPTFLPWVPERGGGELDL---------VVRELQALEEELREAAERRRAAWE 282
E+ ASQPT W GG DL + +LQ LE+ E+ R E
Sbjct: 691 IWELQPTASQPTV--W---EGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAE 745
Query: 283 AKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGDR 342
+A + E R+ ++E+ QQ ER + L RR+ A R
Sbjct: 746 MRA----KREEEERKRQEELRRQQEEILRRQQEEER-----KRREEEELARRKQEEALRR 796
Query: 343 DLRAAVVIRTLRSQE--ACLEAVLRRLQGQCRQELAR 377
+ +R R +E E LRRL+ + R+E R
Sbjct: 797 QREQEIALRRQREEEERQQQEEALRRLEERRREEEER 833
>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 39.7 bits (91), Expect = 0.005
Identities = 73/277 (26%), Positives = 109/277 (39%), Gaps = 55/277 (19%)
Query: 134 PLGDEMTVCQCEALASPGP-PAPHM------------EAEGPVDVRHVQWLMGKLRFRWR 180
PLGD M + SPGP P PHM E ++H+Q+ ++ ++
Sbjct: 579 PLGDIMKMWG-RVPFSPGPAPPPHMGELDQERLTRQQELTALYQMQHLQYQQFLIQQQYA 637
Query: 181 QLV---------SSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTC 231
Q++ S QQ+Q ALL + +TL+ + + RS V DT
Sbjct: 638 QVLAQQQKAALSSQQQQQLALLLQQFQTLKMRISDQNIIPSVTRSVSV----PDT---GS 690
Query: 232 APEVPAAASQPTFLPWVPERGGGELDL---------VVRELQALEEELREAAERRRAAWE 282
E+ ASQPT W GG DL + +LQ LE+ E+ R E
Sbjct: 691 IWELQPTASQPTV--W---EGGSVWDLPLDTTTPGPALEQLQQLEKAKAAKLEQERREAE 745
Query: 283 AKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAAGDR 342
+A + E R+ ++E+ QQ ER + L RR+ A R
Sbjct: 746 MRA----KREEEERKRQEELRRQQEEILRRQQEEER-----KRREEEELARRKQEEALRR 796
Query: 343 DLRAAVVIRTLRSQE--ACLEAVLRRLQGQCRQELAR 377
+ +R R +E E LRRL+ + R+E R
Sbjct: 797 QREQEIALRRQREEEERQQQEEALRRLEERRREEEER 833
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 37.0 bits (84), Expect = 0.031
Identities = 67/244 (27%), Positives = 84/244 (34%), Gaps = 53/244 (21%)
Query: 119 ARGPVPEQMLAQARV--------PLGD--EMTVCQCEALASPGPPAPHMEAEGPVDVRHV 168
A GP + + A+ RV P GD E V +++ + GP M+AEGP
Sbjct: 232 AEGPAGDSVDAEGRVGDSVEAGDPAGDGVEAGVPAGDSVEAEGPAGDSMDAEGPA----- 286
Query: 169 QWLMGKLRFRWRQLVSSQQEQCALLSKLLRTLE----RENQRLEAVLAWRRSELVFWRWM 224
G+ R R QQ LS +E R LAW +E
Sbjct: 287 ----GRAR---RVSGEPQQSGDGSLSPQAEAIEVAAGESAGRSPGELAWDAAE------- 332
Query: 225 DTVLGTCAPEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAA---- 280
EVP P GE R ++E E ERR +
Sbjct: 333 -------EAEVPGVKGSEEAAPGDARADAGE----DRVGDGPQQEPGEDEERRERSPEGP 381
Query: 281 -WEAKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLV--RREDG 337
E AGG P+ S ASR A E E E GPA+ G V RREDG
Sbjct: 382 REEEAAGGEEESPDSSPHGEASRGAAEPEAQLSNHLAEE--GPAEGSGEAARVNGRREDG 439
Query: 338 AAGD 341
A +
Sbjct: 440 EASE 443
Score = 30.8 bits (68), Expect = 2.2
Identities = 31/90 (34%), Positives = 35/90 (38%), Gaps = 9/90 (10%)
Query: 233 PEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAAWEAKAGGCGRGP 292
PEVPA ++ P P GGE E E EA A EA GG RGP
Sbjct: 18 PEVPAPLAER---PGEPGAAGGEA-----EGPEGSEGAEEAPRGAAAVKEAGGGGPDRGP 69
Query: 293 EWSA-ARRASREAVEKELGALQQCWERDGG 321
E A R + E E GA + GG
Sbjct: 70 EAEARGTRGAHGETEAEEGAPEGAEVPQGG 99
>gi|169203406 PREDICTED: hypothetical protein [Homo sapiens]
Length = 145
Score = 36.2 bits (82), Expect = 0.053
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 229 GTCAPEVPAAASQPTF--LPWVPERGGGELDLVVRELQALEEEL-REAAERRRAAWEAKA 285
G C P AAA P LP P+ GGG DL+ L + E + R ERR++ + K+
Sbjct: 66 GACGPGAGAAAPAPAAASLPEEPDGGGGPDDLLPLPLWLVAEGIFRPQGERRKSGRKDKS 125
Query: 286 GGCGRG 291
G G G
Sbjct: 126 GQSGDG 131
>gi|169202578 PREDICTED: hypothetical protein [Homo sapiens]
Length = 145
Score = 36.2 bits (82), Expect = 0.053
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 229 GTCAPEVPAAASQPTF--LPWVPERGGGELDLVVRELQALEEEL-REAAERRRAAWEAKA 285
G C P AAA P LP P+ GGG DL+ L + E + R ERR++ + K+
Sbjct: 66 GACGPGAGAAAPAPAAASLPEEPDGGGGPDDLLPLPLWLVAEGIFRPQGERRKSGRKDKS 125
Query: 286 GGCGRG 291
G G G
Sbjct: 126 GQSGDG 131
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 35.4 bits (80), Expect = 0.090
Identities = 43/144 (29%), Positives = 55/144 (38%), Gaps = 22/144 (15%)
Query: 232 APE--VPAAASQPTF-----LPWVPERGGGELDLVVRELQALEEELREAAERRRAAWEAK 284
APE VP+A P +P VP R G L + L++ A +EAK
Sbjct: 2289 APEKRVPSAGGPPVLAEKARVPTVPPRPGSSLSSSIENLES------------EAVFEAK 2336
Query: 285 AGGCGRGPEWSAARRASREAVEKELGALQQCWERDG--GPAQPHGPHRLVRREDGAAGDR 342
P R SR E E G + E DG P+ P LVRR + + +
Sbjct: 2337 FKRSRESPLSLGLRLLSRSRSE-ERGPFRGAEEEDGIYRPSPAGTPLELVRRPERSRSVQ 2395
Query: 343 DLRAAVVIRTLRSQEACLEAVLRR 366
DLRA +R L LRR
Sbjct: 2396 DLRAVGEPGLVRRLSLSLSQRLRR 2419
Score = 34.7 bits (78), Expect = 0.15
Identities = 77/322 (23%), Positives = 108/322 (33%), Gaps = 50/322 (15%)
Query: 1 MGRRRQRVDPAAGARAGALPEAIAALSRSLPSGPS---PEIFRRAKFDRPEATSALWQLL 57
+G RR + P+ A + A P + A S PS P P + +P A
Sbjct: 2156 LGARRLQESPSLSALSEAQPSSPARPSAPKPSTPKSAEPSATTPSDAPQPPAPQPAQDKA 2215
Query: 58 -------FRVLSPLPAGNALASLALEVQ--ARLVKSALCSQGYPRLALAQLPEDGSQGSR 108
R P P AL +LAL + A++++S S AQ P G
Sbjct: 2216 PEPRPEPVRASKPAPPPQALQTLALPLTPYAQIIQSLQLS------GHAQGPSQGPAAPP 2269
Query: 109 ELLLALSWLLARGPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDVRHV 168
+ + AR P + RVP V +A PP P ++
Sbjct: 2270 SEPKPHAAVFARVASPPPGAPEKRVPSAGGPPVLAEKARVPTVPPRPGSSLSSSIENLES 2329
Query: 169 QWLMGKLRFRWRQLVSSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMDTVL 228
+ + R R+ + LS LR L R E +R
Sbjct: 2330 EAVFEAKFKRSRE---------SPLSLGLRLLSRSRSEERGPFRGAEEEDGIYR------ 2374
Query: 229 GTCAPEVPAAASQPTFLPWVPERGG--------GELDLVVRELQALEEELREAAE-RRRA 279
P+ A P L PER GE LV R +L + LR +R
Sbjct: 2375 -------PSPAGTPLELVRRPERSRSVQDLRAVGEPGLVRRLSLSLSQRLRRTPPAQRHP 2427
Query: 280 AWEAKAGGCGRGPEWSAARRAS 301
AWEA+ GG G E ++ R S
Sbjct: 2428 AWEAR-GGDGESSEGGSSARGS 2448
>gi|197382472 actin filament associated protein 1 isoform a [Homo
sapiens]
Length = 814
Score = 33.9 bits (76), Expect = 0.26
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 342 RDLRAAVVIRTLRSQEACLEAVLRRLQGQCRQELARLV 379
+DLRAA+ + R +A LE L++L+ +CRQ+ A V
Sbjct: 677 KDLRAAIEVNAGRKPQAILEEKLKQLEEECRQKEAERV 714
>gi|40807504 actin filament associated protein 1 [Homo sapiens]
Length = 730
Score = 33.9 bits (76), Expect = 0.26
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 342 RDLRAAVVIRTLRSQEACLEAVLRRLQGQCRQELARLV 379
+DLRAA+ + R +A LE L++L+ +CRQ+ A V
Sbjct: 593 KDLRAAIEVNAGRKPQAILEEKLKQLEEECRQKEAERV 630
>gi|115583657 hypothetical protein LOC150368 [Homo sapiens]
Length = 259
Score = 33.5 bits (75), Expect = 0.34
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 232 APEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREA-AERRRAAWEAKAGGC-G 289
A E PAA Q ++ + G + LVVREL++ ++ R++ A +RR++W++ A C
Sbjct: 102 AAEGPAA--QEAWVKVLSRASFGYMRLVVRELESQLQDARQSLALQRRSSWKSVASRCKP 159
Query: 290 RGPEWSAARRASREAVEKE---LGALQQCWERDGG 321
+ P AA + + K+ +G +++ R G
Sbjct: 160 QAPNHRAAGLENGHCLSKDSSPVGLVEEAGSRSAG 194
>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
Length = 2663
Score = 32.7 bits (73), Expect = 0.58
Identities = 23/68 (33%), Positives = 30/68 (44%)
Query: 270 LREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPH 329
L + +E+R+ E G E RR S EA AL+ C ER G A+P H
Sbjct: 913 LDKNSEKRKEQTEKHKSVPGYLSEKDKKRRESAEAGRDRKDALESCKERRDGRAKPEEAH 972
Query: 330 RLVRREDG 337
R +E G
Sbjct: 973 REELKECG 980
>gi|226495417 coiled-coil domain containing 102A [Homo sapiens]
Length = 550
Score = 32.3 bits (72), Expect = 0.76
Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 10/126 (7%)
Query: 176 RFRWRQLVSSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTC--AP 233
R R R+ V +++ L+K L RE Q + R EL R V P
Sbjct: 115 RNRAREEVRQLRQRLDALTKELAGARRERQEAQGECEARGRELARLRGARGVADQTRDGP 174
Query: 234 EVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAAWEAKAGGCGRGPE 293
E P A +P G E +EL+ +E L+ E WEA++ G G GP
Sbjct: 175 E-PEAEREPV------RDVGSERPPGSQELELVESLLKSMPEESEDCWEARSLGAG-GPR 226
Query: 294 WSAARR 299
S+ R+
Sbjct: 227 GSSGRQ 232
>gi|169214061 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 32.3 bits (72), Expect = 0.76
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 4 RRQRVDPAAGARAGALPEAIAALSRSLPSGPSPEIFRRAKFD-RPEATSALWQLLFRVLS 62
RRQR A RAGA P L P PSP + + RP + W+LL R
Sbjct: 178 RRQRRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRP 237
Query: 63 PLPAGNA 69
AG+A
Sbjct: 238 ERAAGSA 244
>gi|169214437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 32.3 bits (72), Expect = 0.76
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 4 RRQRVDPAAGARAGALPEAIAALSRSLPSGPSPEIFRRAKFD-RPEATSALWQLLFRVLS 62
RRQR A RAGA P L P PSP + + RP + W+LL R
Sbjct: 178 RRQRRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRP 237
Query: 63 PLPAGNA 69
AG+A
Sbjct: 238 ERAAGSA 244
>gi|169213353 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 32.3 bits (72), Expect = 0.76
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 4 RRQRVDPAAGARAGALPEAIAALSRSLPSGPSPEIFRRAKFD-RPEATSALWQLLFRVLS 62
RRQR A RAGA P L P PSP + + RP + W+LL R
Sbjct: 178 RRQRRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRP 237
Query: 63 PLPAGNA 69
AG+A
Sbjct: 238 ERAAGSA 244
>gi|208022661 hypothetical protein LOC57701 [Homo sapiens]
Length = 1334
Score = 32.0 bits (71), Expect = 0.99
Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 16/106 (15%)
Query: 187 QEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTCAPEVPAAASQPTFLP 246
+E+C L K + LER+NQ L A +F + + G+ P++P QP
Sbjct: 80 REECIKLKKRVFDLERQNQMLSA---------LFQQKLQLTTGS-LPQIPLTPLQP---- 125
Query: 247 WVPERGGGELDLVVRELQALEEELREAAERRRAAWEAKAGGCGRGP 292
P L E A L A +R WE + G GP
Sbjct: 126 --PSEPPASPSLSSTEGPAAPLPLGHCAGQREVCWEQQLRPGGPGP 169
>gi|30039694 zinc finger protein 598 [Homo sapiens]
Length = 904
Score = 32.0 bits (71), Expect = 0.99
Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 12/99 (12%)
Query: 255 ELDLVVRELQALEEELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGALQQ 314
E+D R+ + R A + RR +W K R E +AA RAS A ++E +
Sbjct: 308 EVDRYSRQGRVARAGTRGAQQSRRGSWRYKREEEDR--EVAAAVRASVAAQQQEEARRSE 365
Query: 315 CWERDG----------GPAQPHGPHRLVRREDGAAGDRD 343
E G GP P GP R R + G ++
Sbjct: 366 DQEEGGRPKKEEAAARGPEDPRGPRRSPRTQGEGPGPKE 404
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 31.6 bits (70), Expect = 1.3
Identities = 75/283 (26%), Positives = 109/283 (38%), Gaps = 25/283 (8%)
Query: 9 DPAAGARAGALPEAIAALSRSLPSGPSPEIFRRAKFDRP-EATSALWQLLFRVLSPLPAG 67
+ AA ARA AL EA+ +L G + +A+ R EA++A Q + L A
Sbjct: 1956 EEAARARAEALQEALGKAHAAL-QGKEQHLLEQAELSRSLEASTATLQ------ASLDAC 2008
Query: 68 NALASLALEVQARLVKSALCSQGYP--------RLALAQLPED-GSQGSRELLLALSWLL 118
A S LE R+ + + Q + ALAQ E+ Q RE LL S L
Sbjct: 2009 QA-HSRQLEEALRIQEGEIQDQDLRYQEDVQQLQQALAQRDEELRHQQEREQLLEKS--L 2065
Query: 119 ARGPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAPHMEAEGP---VDVRHVQWLMGKL 175
A+ V E M+ Q + LG E + L A+ +++R Q
Sbjct: 2066 AQR-VQENMI-QEKQNLGQEREEEEIRGLHQSVRELQLTLAQKEQEILELRETQQRNNLE 2123
Query: 176 RFRWRQLVSSQQEQCALLSKLLRTLERENQRLEAVLAWRRSELVFWRWMDTVLGTCAPEV 235
S +EQ L L L+RE +RL+A L + + WR L +
Sbjct: 2124 ALPHSHKTSPMEEQSLKLDSLEPRLQRELERLQAALRQTEAREIEWREKAQDLALSLAQT 2183
Query: 236 PAAASQPTFLPWVPERGGGELDLVVRELQALEEELREAAERRR 278
A+ S + + E D + LQ E R A E+ R
Sbjct: 2184 KASVSSLQEVAMFLQASVLERDSEQQRLQDELELTRRALEKER 2226
>gi|157738667 FYVE and coiled-coil domain containing 1 [Homo
sapiens]
Length = 1478
Score = 31.2 bits (69), Expect = 1.7
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 47/231 (20%)
Query: 180 RQLVSSQQEQCALLSKLLRTLERENQRLEAVLAW----------RRSELVFWR------- 222
R+ QQE+ LL + +R+L R+ Q LE LA ++ +L+ +
Sbjct: 491 RREKKQQQEEKELLEQEVRSLTRQLQFLETQLAQVSQHVSDLEEQKKQLIQDKDHLSQQV 550
Query: 223 -WMDTVLGTCAPEVPAAASQPTFL-------------PWVPERGGGELDLVVRELQ--AL 266
++ + G PE+P A + L P +RG E L ++Q +
Sbjct: 551 GMLERLAGPPGPELPVAGEKNEALVPVNSSLQEAWGKPEEEQRGLQEAQLDDTKVQEGSQ 610
Query: 267 EEELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPH 326
EEELR+A + G A +A +A+++ A+Q G A
Sbjct: 611 EEELRQANRELEKELQNVVGRNQLLEGKLQALQADYQALQQRESAIQ------GSLASLE 664
Query: 327 GPHRLVRREDGAAGDRDLRAAVVIR----TLRSQEACLEAVLRRLQGQCRQ 373
+R GD+ + + +R +++Q A EA+L+ +G+C+Q
Sbjct: 665 AEQASIRH----LGDQMEASLLAVRKAKEAMKAQMAEKEAILQSKEGECQQ 711
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 31.2 bits (69), Expect = 1.7
Identities = 36/127 (28%), Positives = 48/127 (37%), Gaps = 20/127 (15%)
Query: 253 GGELDLVVRELQALEEELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGAL 312
G ++ ++ELQA EEL E E RAA A R +EL L
Sbjct: 1150 GAQMQKKIKELQARAEELEEELEAERAA--------------RARVEKQRAEAARELEEL 1195
Query: 313 QQCWERDGGPAQPHGPHRLVRREDGAAGDRDLRAAVVIRTLRSQEACLEAVLRRLQGQCR 372
+ E GG + G R+ + G LR + LR + A LRR Q +
Sbjct: 1196 SERLEEAGGASA--GQREGCRKREAELG--RLRRELEEAALRHEATV--AALRRKQAEGA 1249
Query: 373 QELARLV 379
EL V
Sbjct: 1250 AELGEQV 1256
>gi|11321642 bromodomain containing protein 1 [Homo sapiens]
Length = 1058
Score = 31.2 bits (69), Expect = 1.7
Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Query: 224 MDTVLGTCAPEVPAAASQPTFLPWVPERGGGELDLVVRELQALEEELREAAERRRAAWEA 283
++ G PE PAAA + F W E LD R LEE+LRE +
Sbjct: 675 LEEASGMHLPERPAAAPRRPF-SW--EDVDRLLDPANRAHLGLEEQLRELLDMLDLTCAM 731
Query: 284 KAGGCGRGPEWSAARRASREAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAA 339
K+ G S ++RA + ++KE+ L+ + P GP EDGAA
Sbjct: 732 KSSG-------SRSKRA--KLLKKEIALLRNKLSQQHSQPLPTGPGLEGFEEDGAA 778
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 30.8 bits (68), Expect = 2.2
Identities = 30/145 (20%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 70 LASLALEVQAR-LVKSALCSQGYPRLALAQLPEDGSQGSRELLLALSWLLARGPVPEQML 128
LA +AL+++ R ++ + + +L + +++L L+ L A+ Q
Sbjct: 5329 LAEVALDLKIRDQIQDKIKEVEQSKATSQELSRQIQKLAKDLTTILTKLKAKTDNVVQAK 5388
Query: 129 AQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDVRHVQWLMGKLRFRWRQLVSSQQE 188
+V LG+E+ C + + +E G + + + +GKL +Q + +
Sbjct: 5389 TDQKV-LGEELDGCNSKLMELDAAVQKFLEQNGQLG-KPLAKKIGKLTELHQQTIRQAEN 5446
Query: 189 QCALLSKLLRTLERENQRLEAVLAW 213
+ + L++ LE N+ LE +L W
Sbjct: 5447 RLSKLNQAASHLEEYNEMLELILKW 5471
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 30.8 bits (68), Expect = 2.2
Identities = 30/145 (20%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 70 LASLALEVQAR-LVKSALCSQGYPRLALAQLPEDGSQGSRELLLALSWLLARGPVPEQML 128
LA +AL+++ R ++ + + +L + +++L L+ L A+ Q
Sbjct: 5400 LAEVALDLKIRDQIQDKIKEVEQSKATSQELSRQIQKLAKDLTTILTKLKAKTDNVVQAK 5459
Query: 129 AQARVPLGDEMTVCQCEALASPGPPAPHMEAEGPVDVRHVQWLMGKLRFRWRQLVSSQQE 188
+V LG+E+ C + + +E G + + + +GKL +Q + +
Sbjct: 5460 TDQKV-LGEELDGCNSKLMELDAAVQKFLEQNGQLG-KPLAKKIGKLTELHQQTIRQAEN 5517
Query: 189 QCALLSKLLRTLERENQRLEAVLAW 213
+ + L++ LE N+ LE +L W
Sbjct: 5518 RLSKLNQAASHLEEYNEMLELILKW 5542
>gi|40068479 mitochondrial rRNA methyltransferase 1 homolog [Homo
sapiens]
Length = 353
Score = 30.8 bits (68), Expect = 2.2
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 48 EATSALWQLLFRVLSPLPAGNALASLALEVQARLVKSALCSQ--GYP----RLALAQLPE 101
+ A QLL +L L SL + V A ++ ++CSQ G+P R L Q P+
Sbjct: 265 QEVQASCQLLLTILPRRQLPPGLESLNVSVAAGILLHSICSQRKGFPTEGERRQLLQDPQ 324
Query: 102 DGSQGSRELLLALSWLLARGPVPEQ 126
+ S S L +A L+ GP E+
Sbjct: 325 EPSARSEGLSMAQHPGLSSGPEKER 349
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,763,347
Number of Sequences: 37866
Number of extensions: 872347
Number of successful extensions: 3737
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 3656
Number of HSP's gapped (non-prelim): 157
length of query: 393
length of database: 18,247,518
effective HSP length: 104
effective length of query: 289
effective length of database: 14,309,454
effective search space: 4135432206
effective search space used: 4135432206
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.