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Search of human proteins with 19924101
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19924101 synapsin II isoform IIb [Homo sapiens]
(478 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19924101 synapsin II isoform IIb [Homo sapiens] 974 0.0
gi|19924103 synapsin II isoform IIa [Homo sapiens] 931 0.0
gi|19924099 synapsin I isoform Ia [Homo sapiens] 615 e-176
gi|19924097 synapsin I isoform Ib [Homo sapiens] 615 e-176
gi|209413756 synapsin III isoform IIIg [Homo sapiens] 578 e-165
gi|209413752 synapsin III isoform IIIa [Homo sapiens] 573 e-164
gi|209413754 synapsin III isoform IIIc [Homo sapiens] 571 e-163
gi|110832843 TBP-associated factor 4 [Homo sapiens] 55 2e-07
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 54 2e-07
gi|153792074 proline rich 12 [Homo sapiens] 54 4e-07
gi|210031233 PR domain containing 6 [Homo sapiens] 51 3e-06
gi|33356148 formin-like 1 [Homo sapiens] 51 3e-06
gi|226498192 atonal homolog 8 [Homo sapiens] 50 5e-06
gi|38683860 insulin receptor substrate 2 [Homo sapiens] 50 5e-06
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 50 5e-06
gi|56549694 enabled homolog isoform a [Homo sapiens] 49 8e-06
gi|39930375 enabled homolog isoform b [Homo sapiens] 49 8e-06
gi|18079216 CASK interacting protein 1 [Homo sapiens] 49 1e-05
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 49 1e-05
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 49 1e-05
gi|145309324 FH2 domain containing 1 [Homo sapiens] 49 1e-05
gi|14149904 anthrax toxin receptor 1 isoform 1 precursor [Homo s... 49 1e-05
gi|11386183 WAS protein family, member 2 [Homo sapiens] 48 2e-05
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 48 2e-05
gi|62945417 dystrophia myotonica-containing WD repeat motif prot... 48 2e-05
gi|90903231 huntingtin [Homo sapiens] 48 2e-05
gi|4503519 eukaryotic translation initiation factor 3, subunit 5... 48 2e-05
gi|52485606 formin-like 2 [Homo sapiens] 48 2e-05
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 48 2e-05
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 47 3e-05
>gi|19924101 synapsin II isoform IIb [Homo sapiens]
Length = 478
Score = 974 bits (2517), Expect = 0.0
Identities = 478/478 (100%), Positives = 478/478 (100%)
Query: 1 MMNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPER 60
MMNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPER
Sbjct: 1 MMNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPER 60
Query: 61 RPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAARKAKVLLVVD 120
RPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAARKAKVLLVVD
Sbjct: 61 RPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAARKAKVLLVVD 120
Query: 121 EPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKVVRSFRP 180
EPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKVVRSFRP
Sbjct: 121 EPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKVVRSFRP 180
Query: 181 DFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCDKPWVFAQLVAIYKTLG 240
DFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCDKPWVFAQLVAIYKTLG
Sbjct: 181 DFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCDKPWVFAQLVAIYKTLG 240
Query: 241 GEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALTQT 300
GEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALTQT
Sbjct: 241 GEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALTQT 300
Query: 301 YATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAMLEQIAMSDRYKLWVDTC 360
YATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAMLEQIAMSDRYKLWVDTC
Sbjct: 301 YATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAMLEQIAMSDRYKLWVDTC 360
Query: 361 SEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITELVISKMNQLLSR 420
SEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITELVISKMNQLLSR
Sbjct: 361 SEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITELVISKMNQLLSR 420
Query: 421 TPALSPQRPLTTQQPQSGTLKDPDSSKTPPQRPPPQGCLQYILDCNGIAVGPKQVQAS 478
TPALSPQRPLTTQQPQSGTLKDPDSSKTPPQRPPPQGCLQYILDCNGIAVGPKQVQAS
Sbjct: 421 TPALSPQRPLTTQQPQSGTLKDPDSSKTPPQRPPPQGCLQYILDCNGIAVGPKQVQAS 478
>gi|19924103 synapsin II isoform IIa [Homo sapiens]
Length = 582
Score = 931 bits (2405), Expect = 0.0
Identities = 457/457 (100%), Positives = 457/457 (100%)
Query: 1 MMNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPER 60
MMNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPER
Sbjct: 1 MMNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPER 60
Query: 61 RPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAARKAKVLLVVD 120
RPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAARKAKVLLVVD
Sbjct: 61 RPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAARKAKVLLVVD 120
Query: 121 EPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKVVRSFRP 180
EPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKVVRSFRP
Sbjct: 121 EPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKVVRSFRP 180
Query: 181 DFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCDKPWVFAQLVAIYKTLG 240
DFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCDKPWVFAQLVAIYKTLG
Sbjct: 181 DFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCDKPWVFAQLVAIYKTLG 240
Query: 241 GEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALTQT 300
GEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALTQT
Sbjct: 241 GEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALTQT 300
Query: 301 YATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAMLEQIAMSDRYKLWVDTC 360
YATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAMLEQIAMSDRYKLWVDTC
Sbjct: 301 YATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAMLEQIAMSDRYKLWVDTC 360
Query: 361 SEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITELVISKMNQLLSR 420
SEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITELVISKMNQLLSR
Sbjct: 361 SEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITELVISKMNQLLSR 420
Query: 421 TPALSPQRPLTTQQPQSGTLKDPDSSKTPPQRPPPQG 457
TPALSPQRPLTTQQPQSGTLKDPDSSKTPPQRPPPQG
Sbjct: 421 TPALSPQRPLTTQQPQSGTLKDPDSSKTPPQRPPPQG 457
Score = 35.0 bits (79), Expect = 0.15
Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 37/113 (32%)
Query: 19 PNGYMTDLQRPEPQ---------QPPP---PP---PPGPGAASASAAPPTASPGPERRP- 62
P+ T QRP PQ QPP PP PPGP +S++ ++S +RP
Sbjct: 443 PDSSKTPPQRPPPQGGPGQPQGMQPPGKVLPPRRLPPGPSLPPSSSSSSSSSSSAPQRPG 502
Query: 63 -------------------PPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAAS 96
PP +AP +P P P + S SL+ A + +S
Sbjct: 503 GPTTHGDAPSSSSSLAEAQPPLAAPPQKPQPHPQLNKS--QSLTNAFSFSESS 553
Score = 33.1 bits (74), Expect = 0.57
Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 12/95 (12%)
Query: 26 LQRPEPQQPPPP-PPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFS 84
L+ P+ + PP PPP G P P RR P P P P+ S SS S
Sbjct: 440 LKDPDSSKTPPQRPPPQGGPGQPQGMQPPGKVLPPRRLP----PGPSLPPSSSSSSSSSS 495
Query: 85 SLSQAV-------KQTAASAGLVDAPAPAPAAARK 112
S Q ++S+ L +A P A +K
Sbjct: 496 SAPQRPGGPTTHGDAPSSSSSLAEAQPPLAAPPQK 530
Score = 32.7 bits (73), Expect = 0.74
Identities = 32/120 (26%), Positives = 43/120 (35%), Gaps = 17/120 (14%)
Query: 8 RLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASA 67
++ D I L M L P P P S + P +S P +RPPP
Sbjct: 399 QVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSKTPPQRPPPQGG 458
Query: 68 PA-PQ---------------PAPT-PSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAA 110
P PQ P P+ P SS SS S A ++ DAP+ + + A
Sbjct: 459 PGQPQGMQPPGKVLPPRRLPPGPSLPPSSSSSSSSSSSAPQRPGGPTTHGDAPSSSSSLA 518
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 615 bits (1586), Expect = e-176
Identities = 312/470 (66%), Positives = 367/470 (78%), Gaps = 19/470 (4%)
Query: 2 MNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERR 61
MN+LRRRLSDS+F+ANLPNGYMTDLQRP+P PPPPPG + A+ P TA+
Sbjct: 1 MNYLRRRLSDSNFMANLPNGYMTDLQRPQP----PPPPPGAHSPGATPGPGTATAERSSG 56
Query: 62 PPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLV------DAPAPAPAAARKAKV 115
PA++PA P+P S G FFSSLS AVKQT A+A A ++V
Sbjct: 57 VAPAASPAA-PSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGGAASRV 115
Query: 116 LLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKVV 175
LLV+DEPH DWAK F+GKK+ G+ DIKVEQAEFS+LNLVAHA+G ++VDM+VLRNG KVV
Sbjct: 116 LLVIDEPHTDWAKYFKGKKIHGEIDIKVEQAEFSDLNLVAHANGGFSVDMEVLRNGVKVV 175
Query: 176 RSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCDKPWVFAQLVAI 235
RS +PDFVLIRQHAF MA N D+R L+IG+QYAG+PS+NSL S+YNFCDKPWVFAQ+V +
Sbjct: 176 RSLKPDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRL 235
Query: 236 YKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVV 295
+K LG E+FPLI+QT+YPNHKEML+ T+PVVVK+GHAHSGMGKVKV+N +DFQDIASVV
Sbjct: 236 HKKLGTEEFPLIDQTFYPNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVV 295
Query: 296 ALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAMLEQIAMSDRYKL 355
ALT+TYATAEPFID+KYD+RVQKIG NYKAYMRTS+SGNWKTNTGSAMLEQIAMSDRYKL
Sbjct: 296 ALTKTYATAEPFIDAKYDVRVQKIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYKL 355
Query: 356 WVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITELVISKMN 415
WVDTCSE+FGGLDICAV+A+HGKDG+D+I EV+ SMPLIG+HQ ED+QLI ELV++KM
Sbjct: 356 WVDTCSEIFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKMA 415
Query: 416 QLL--SRTPALSPQRPLTTQQPQSGTL----KDPDSSKTPP--QRPPPQG 457
Q L R SP R Q P G L + PP QRPPPQG
Sbjct: 416 QALPRQRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQG 465
Score = 42.0 bits (97), Expect = 0.001
Identities = 26/66 (39%), Positives = 28/66 (42%), Gaps = 18/66 (27%)
Query: 27 QRPEPQQPPPPPPPGPGAAS---------------ASAAPPTASPGPERRPPPASA---P 68
QRP PQ PP P PGP + PP SP P+R P P SA P
Sbjct: 459 QRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQP 518
Query: 69 APQPAP 74
A Q AP
Sbjct: 519 ASQAAP 524
Score = 41.2 bits (95), Expect = 0.002
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 19/88 (21%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPPTASPGPERRP-------PPASAPAPQPAPTPSVGSS 81
P PQ+ P P P ++ AAPPT G + RP PPA+ P P+P G
Sbjct: 503 PLPQRL-PSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGP- 560
Query: 82 FFSSLSQAVKQTAASAGLVDAPAPAPAA 109
QA +QT+ V PAP A+
Sbjct: 561 -----PQATRQTS-----VSGPAPPKAS 578
Score = 38.1 bits (87), Expect = 0.018
Identities = 36/115 (31%), Positives = 42/115 (36%), Gaps = 33/115 (28%)
Query: 18 LPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPER-------RP-------- 62
LP G T Q P PPP G PP PGP+R RP
Sbjct: 442 LPLGRQTSQQPAGPPAQQRPPPQG--------GPPQPGPGPQRQGPPLQQRPPPQGQQHL 493
Query: 63 ----PPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAA----SAGLVDAPAPAPAA 109
PPA +P PQ P+P+ S+ SQA T S + P PAA
Sbjct: 494 SGLGPPAGSPLPQRLPSPT--SAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAA 546
Score = 37.0 bits (84), Expect = 0.039
Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 18/80 (22%)
Query: 31 PQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAV 90
PQ+PP P P A+ A P T P ++ P PA +P P L+Q
Sbjct: 591 PQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKP----------QLAQKP 640
Query: 91 KQTAASAGLVDAPAPAPAAA 110
Q D P PA AAA
Sbjct: 641 SQ--------DVPPPATAAA 652
Score = 32.3 bits (72), Expect = 0.97
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 18/83 (21%)
Query: 29 PEPQQPPP----PPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFS 84
P P+ PP P P GPG A P A + PPPA+A A P P P + S
Sbjct: 609 PVPRTGPPTTQQPRPSGPGPA-GRPKPQLAQKPSQDVPPPATAAAGGP-PHPQLNKS--Q 664
Query: 85 SLSQAVKQTAASAGLVDAPAPAP 107
SL+ A + P PAP
Sbjct: 665 SLTNA----------FNLPEPAP 677
Score = 32.0 bits (71), Expect = 1.3
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 38 PPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTP 76
P PG + A P ++RPPP P PQP P P
Sbjct: 437 PSPGALPLGRQTSQQPAGPPAQQRPPPQGGP-PQPGPGP 474
Score = 32.0 bits (71), Expect = 1.3
Identities = 26/64 (40%), Positives = 29/64 (45%), Gaps = 19/64 (29%)
Query: 27 QRPEPQQPPP---------PPPPGPGAASASAAPPTASPGPERR--PPPA------SAPA 69
Q+P Q PP P GPGA A A P ASP P+R+ PP A S PA
Sbjct: 516 QQPASQAAPPTQGQGRQSRPVAGGPGAPPA--ARPPASPSPQRQAGPPQATRQTSVSGPA 573
Query: 70 PQPA 73
P A
Sbjct: 574 PPKA 577
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 615 bits (1586), Expect = e-176
Identities = 312/470 (66%), Positives = 367/470 (78%), Gaps = 19/470 (4%)
Query: 2 MNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERR 61
MN+LRRRLSDS+F+ANLPNGYMTDLQRP+P PPPPPG + A+ P TA+
Sbjct: 1 MNYLRRRLSDSNFMANLPNGYMTDLQRPQP----PPPPPGAHSPGATPGPGTATAERSSG 56
Query: 62 PPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLV------DAPAPAPAAARKAKV 115
PA++PA P+P S G FFSSLS AVKQT A+A A ++V
Sbjct: 57 VAPAASPAA-PSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGGAASRV 115
Query: 116 LLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKVV 175
LLV+DEPH DWAK F+GKK+ G+ DIKVEQAEFS+LNLVAHA+G ++VDM+VLRNG KVV
Sbjct: 116 LLVIDEPHTDWAKYFKGKKIHGEIDIKVEQAEFSDLNLVAHANGGFSVDMEVLRNGVKVV 175
Query: 176 RSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCDKPWVFAQLVAI 235
RS +PDFVLIRQHAF MA N D+R L+IG+QYAG+PS+NSL S+YNFCDKPWVFAQ+V +
Sbjct: 176 RSLKPDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRL 235
Query: 236 YKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVV 295
+K LG E+FPLI+QT+YPNHKEML+ T+PVVVK+GHAHSGMGKVKV+N +DFQDIASVV
Sbjct: 236 HKKLGTEEFPLIDQTFYPNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVV 295
Query: 296 ALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAMLEQIAMSDRYKL 355
ALT+TYATAEPFID+KYD+RVQKIG NYKAYMRTS+SGNWKTNTGSAMLEQIAMSDRYKL
Sbjct: 296 ALTKTYATAEPFIDAKYDVRVQKIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYKL 355
Query: 356 WVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITELVISKMN 415
WVDTCSE+FGGLDICAV+A+HGKDG+D+I EV+ SMPLIG+HQ ED+QLI ELV++KM
Sbjct: 356 WVDTCSEIFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKMA 415
Query: 416 QLL--SRTPALSPQRPLTTQQPQSGTL----KDPDSSKTPP--QRPPPQG 457
Q L R SP R Q P G L + PP QRPPPQG
Sbjct: 416 QALPRQRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQG 465
Score = 42.0 bits (97), Expect = 0.001
Identities = 26/66 (39%), Positives = 28/66 (42%), Gaps = 18/66 (27%)
Query: 27 QRPEPQQPPPPPPPGPGAAS---------------ASAAPPTASPGPERRPPPASA---P 68
QRP PQ PP P PGP + PP SP P+R P P SA P
Sbjct: 459 QRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQP 518
Query: 69 APQPAP 74
A Q AP
Sbjct: 519 ASQAAP 524
Score = 41.2 bits (95), Expect = 0.002
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 19/88 (21%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPPTASPGPERRP-------PPASAPAPQPAPTPSVGSS 81
P PQ+ P P P ++ AAPPT G + RP PPA+ P P+P G
Sbjct: 503 PLPQRL-PSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGP- 560
Query: 82 FFSSLSQAVKQTAASAGLVDAPAPAPAA 109
QA +QT+ V PAP A+
Sbjct: 561 -----PQATRQTS-----VSGPAPPKAS 578
Score = 38.1 bits (87), Expect = 0.018
Identities = 36/115 (31%), Positives = 42/115 (36%), Gaps = 33/115 (28%)
Query: 18 LPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPER-------RP-------- 62
LP G T Q P PPP G PP PGP+R RP
Sbjct: 442 LPLGRQTSQQPAGPPAQQRPPPQG--------GPPQPGPGPQRQGPPLQQRPPPQGQQHL 493
Query: 63 ----PPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAA----SAGLVDAPAPAPAA 109
PPA +P PQ P+P+ S+ SQA T S + P PAA
Sbjct: 494 SGLGPPAGSPLPQRLPSPT--SAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAA 546
Score = 37.0 bits (84), Expect = 0.039
Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 18/80 (22%)
Query: 31 PQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAV 90
PQ+PP P P A+ A P T P ++ P PA +P P L+Q
Sbjct: 591 PQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKP----------QLAQKP 640
Query: 91 KQTAASAGLVDAPAPAPAAA 110
Q D P PA AAA
Sbjct: 641 SQ--------DVPPPATAAA 652
Score = 32.0 bits (71), Expect = 1.3
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 38 PPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTP 76
P PG + A P ++RPPP P PQP P P
Sbjct: 437 PSPGALPLGRQTSQQPAGPPAQQRPPPQGGP-PQPGPGP 474
Score = 32.0 bits (71), Expect = 1.3
Identities = 26/64 (40%), Positives = 29/64 (45%), Gaps = 19/64 (29%)
Query: 27 QRPEPQQPPP---------PPPPGPGAASASAAPPTASPGPERR--PPPA------SAPA 69
Q+P Q PP P GPGA A A P ASP P+R+ PP A S PA
Sbjct: 516 QQPASQAAPPTQGQGRQSRPVAGGPGAPPA--ARPPASPSPQRQAGPPQATRQTSVSGPA 573
Query: 70 PQPA 73
P A
Sbjct: 574 PPKA 577
Score = 31.2 bits (69), Expect = 2.2
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 29 PEPQQPPP----PPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSS 81
P P+ PP P P GPG A P A + PPPA+A A P P P + +S
Sbjct: 609 PVPRTGPPTTQQPRPSGPGPA-GRPKPQLAQKPSQDVPPPATAAAGGP-PHPQLKAS 663
>gi|209413756 synapsin III isoform IIIg [Homo sapiens]
Length = 579
Score = 578 bits (1490), Expect = e-165
Identities = 295/483 (61%), Positives = 360/483 (74%), Gaps = 44/483 (9%)
Query: 2 MNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERR 61
MNFLRRRLSDSSF+ANLPNGYMTDLQRP+ S++++P ASP ERR
Sbjct: 1 MNFLRRRLSDSSFMANLPNGYMTDLQRPD---------------SSTSSP--ASPAMERR 43
Query: 62 PPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTA-ASAGLVDAPAPAPAAARKAKVLLVVD 120
P P A S GSS FSSLS A+KQ A++GL++ P P+ ++ ++LLV+D
Sbjct: 44 HPQ-----PLAASFSSPGSSLFSSLSSAMKQAPQATSGLMEPPGPSTPIVQRPRILLVID 98
Query: 121 EPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKVVRSFRP 180
+ H DW+K F GKKV G+ +I+VEQAEFSELNL A+ G VDMQV+RNGTKVVRSF+P
Sbjct: 99 DAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGCMVDMQVVRNGTKVVRSFKP 158
Query: 181 DFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCDKPWVFAQLVAIYKTLG 240
DF+L+RQHA+ MA ED+R L+IG+QY GLP++NSL S+YNFC KPWVF+QL+ I+ +LG
Sbjct: 159 DFILVRQHAYSMALGEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLG 218
Query: 241 GEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALTQT 300
EKFPL+EQT++PNHK M+T P FPVVVK+GHAH+GMGK+KVEN DFQDI SVVA+ +T
Sbjct: 219 PEKFPLVEQTFFPNHKPMVTAPHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMAKT 278
Query: 301 YATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAMLEQIAMSDRYKLWVDTC 360
YAT E FIDSKYDIR+QKIG+NYKAYMRTSISGNWK NTGSAMLEQ+AM++RY+LWVD+C
Sbjct: 279 YATTEAFIDSKYDIRIQKIGSNYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDSC 338
Query: 361 SEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITELVISKMNQLLSR 420
SEMFGGLDICAVKAVH KDG+DYI EVMD SMPLIGEH EDRQL+ +LV+SKM+QL
Sbjct: 339 SEMFGGLDICAVKAVHSKDGRDYIIEVMDSSMPLIGEHVEEDRQLMADLVVSKMSQL--P 396
Query: 421 TPALSPQRPLTTQQPQSGTLKDPDSSKTPPQ------RPPPQGCLQYILDCNGIAVGPKQ 474
P + PL PQ + K P ++ PQ RPPPQG GP+Q
Sbjct: 397 MPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQG-------------GPRQ 443
Query: 475 VQA 477
Q+
Sbjct: 444 AQS 446
Score = 33.9 bits (76), Expect = 0.33
Identities = 28/86 (32%), Positives = 33/86 (38%), Gaps = 9/86 (10%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPP--TASPGPERRPP----PASAPAPQPAPTPSVGSSF 82
P+ QP P PPP G A + P + SP +R P P S + P S GS
Sbjct: 426 PQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQ 485
Query: 83 FSSLSQAVKQTAAS---AGLVDAPAP 105
S S AS A L P P
Sbjct: 486 LSRASSGSSPNQASKPGATLASQPRP 511
Score = 32.0 bits (71), Expect = 1.3
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 12/78 (15%)
Query: 11 DSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPER-----RPPP- 64
D +A+L M+ L P P P P P SA + P A GP+ RPPP
Sbjct: 380 DRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKS-PGQAQLGPQLGQPQPRPPPQ 438
Query: 65 -----ASAPAPQPAPTPS 77
A +P PQ + +PS
Sbjct: 439 GGPRQAQSPQPQRSGSPS 456
>gi|209413752 synapsin III isoform IIIa [Homo sapiens]
Length = 580
Score = 573 bits (1478), Expect = e-164
Identities = 295/484 (60%), Positives = 360/484 (74%), Gaps = 45/484 (9%)
Query: 2 MNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERR 61
MNFLRRRLSDSSF+ANLPNGYMTDLQRP+ S++++P ASP ERR
Sbjct: 1 MNFLRRRLSDSSFMANLPNGYMTDLQRPD---------------SSTSSP--ASPAMERR 43
Query: 62 PPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTA-ASAGLVDAPAPAPAAARKAKVLLVVD 120
P P A S GSS FSSLS A+KQ A++GL++ P P+ ++ ++LLV+D
Sbjct: 44 HPQ-----PLAASFSSPGSSLFSSLSSAMKQAPQATSGLMEPPGPSTPIVQRPRILLVID 98
Query: 121 EPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKVV-RSFR 179
+ H DW+K F GKKV G+ +I+VEQAEFSELNL A+ G VDMQV+RNGTKVV RSF+
Sbjct: 99 DAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGCMVDMQVVRNGTKVVSRSFK 158
Query: 180 PDFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCDKPWVFAQLVAIYKTL 239
PDF+L+RQHA+ MA ED+R L+IG+QY GLP++NSL S+YNFC KPWVF+QL+ I+ +L
Sbjct: 159 PDFILVRQHAYSMALGEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSL 218
Query: 240 GGEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALTQ 299
G EKFPL+EQT++PNHK M+T P FPVVVK+GHAH+GMGK+KVEN DFQDI SVVA+ +
Sbjct: 219 GPEKFPLVEQTFFPNHKPMVTAPHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMAK 278
Query: 300 TYATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAMLEQIAMSDRYKLWVDT 359
TYAT E FIDSKYDIR+QKIG+NYKAYMRTSISGNWK NTGSAMLEQ+AM++RY+LWVD+
Sbjct: 279 TYATTEAFIDSKYDIRIQKIGSNYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDS 338
Query: 360 CSEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITELVISKMNQLLS 419
CSEMFGGLDICAVKAVH KDG+DYI EVMD SMPLIGEH EDRQL+ +LV+SKM+QL
Sbjct: 339 CSEMFGGLDICAVKAVHSKDGRDYIIEVMDSSMPLIGEHVEEDRQLMADLVVSKMSQL-- 396
Query: 420 RTPALSPQRPLTTQQPQSGTLKDPDSSKTPPQ------RPPPQGCLQYILDCNGIAVGPK 473
P + PL PQ + K P ++ PQ RPPPQG GP+
Sbjct: 397 PMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQG-------------GPR 443
Query: 474 QVQA 477
Q Q+
Sbjct: 444 QAQS 447
Score = 33.9 bits (76), Expect = 0.33
Identities = 28/86 (32%), Positives = 33/86 (38%), Gaps = 9/86 (10%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPP--TASPGPERRPP----PASAPAPQPAPTPSVGSSF 82
P+ QP P PPP G A + P + SP +R P P S + P S GS
Sbjct: 427 PQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQ 486
Query: 83 FSSLSQAVKQTAAS---AGLVDAPAP 105
S S AS A L P P
Sbjct: 487 LSRASSGSSPNQASKPGATLASQPRP 512
Score = 32.0 bits (71), Expect = 1.3
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 12/78 (15%)
Query: 11 DSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPER-----RPPP- 64
D +A+L M+ L P P P P P SA + P A GP+ RPPP
Sbjct: 381 DRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKS-PGQAQLGPQLGQPQPRPPPQ 439
Query: 65 -----ASAPAPQPAPTPS 77
A +P PQ + +PS
Sbjct: 440 GGPRQAQSPQPQRSGSPS 457
>gi|209413754 synapsin III isoform IIIc [Homo sapiens]
Length = 444
Score = 571 bits (1471), Expect = e-163
Identities = 291/466 (62%), Positives = 354/466 (75%), Gaps = 32/466 (6%)
Query: 2 MNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERR 61
MNFLRRRLSDSSF+ANLPNGYMTDLQRP+ S++++P ASP ERR
Sbjct: 1 MNFLRRRLSDSSFMANLPNGYMTDLQRPD---------------SSTSSP--ASPAMERR 43
Query: 62 PPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTA-ASAGLVDAPAPAPAAARKAKVLLVVD 120
P P A S GSS FSSLS A+KQ A++GL++ P P+ ++ ++LLV+D
Sbjct: 44 HPQ-----PLAASFSSPGSSLFSSLSSAMKQAPQATSGLMEPPGPSTPIVQRPRILLVID 98
Query: 121 EPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKVV-RSFR 179
+ H DW+K F GKKV G+ +I+VEQAEFSELNL A+ G VDMQV+RNGTKVV RSF+
Sbjct: 99 DAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGCMVDMQVVRNGTKVVSRSFK 158
Query: 180 PDFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCDKPWVFAQLVAIYKTL 239
PDF+L+RQHA+ MA ED+R L+IG+QY GLP++NSL S+YNFC KPWVF+QL+ I+ +L
Sbjct: 159 PDFILVRQHAYSMALGEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSL 218
Query: 240 GGEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALTQ 299
G EKFPL+EQT++PNHK M+T P FPVVVK+GHAH+GMGK+KVEN DFQDI SVVA+ +
Sbjct: 219 GPEKFPLVEQTFFPNHKPMVTAPHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMAK 278
Query: 300 TYATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAMLEQIAMSDRYKLWVDT 359
TYAT E FIDSKYDIR+QKIG+NYKAYMRTSISGNWK NTGSAMLEQ+AM++RY+LWVD+
Sbjct: 279 TYATTEAFIDSKYDIRIQKIGSNYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDS 338
Query: 360 CSEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITELVISKMNQLLS 419
CSEMFGGLDICAVKAVH KDG+DYI EVMD SMPLIGEH EDRQL+ +LV+SKM+QL
Sbjct: 339 CSEMFGGLDICAVKAVHSKDGRDYIIEVMDSSMPLIGEHVEEDRQLMADLVVSKMSQL-- 396
Query: 420 RTPALSPQRPLTTQQPQSGTLKDPDSSKTPPQ------RPPPQGCL 459
P + PL PQ + K P ++ PQ RPPPQ L
Sbjct: 397 PMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQANL 442
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 54.7 bits (130), Expect = 2e-07
Identities = 36/89 (40%), Positives = 39/89 (43%), Gaps = 15/89 (16%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPPTASPGPERRPP--PASAPAPQPAPTPSVGSSFFSSL 86
P P P PP P P A +A+ PP +P RPP PA P PA P
Sbjct: 250 PAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPP---------- 299
Query: 87 SQAVKQTAASAGLVDAPAPAPAAARKAKV 115
A Q SAG APAPAPAA A V
Sbjct: 300 -PAAAQNGGSAGA--APAPAPAAGGPAGV 325
Score = 40.8 bits (94), Expect = 0.003
Identities = 28/100 (28%), Positives = 37/100 (37%), Gaps = 9/100 (9%)
Query: 28 RPEPQQPPPPPPPGPGAASASAAPPTASPGPER---------RPPPASAPAPQPAPTPSV 78
RP P+ P P AA+ +A P A GP + R P P P P P P
Sbjct: 127 RPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGP 186
Query: 79 GSSFFSSLSQAVKQTAASAGLVDAPAPAPAAARKAKVLLV 118
G +Q + +AA A APA + L+
Sbjct: 187 GKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALL 226
Score = 40.0 bits (92), Expect = 0.005
Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 29 PEPQQPPPPPPPGPGAASASAAP-PTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLS 87
PEP P P GP A +A A P P PGP P P P A T + ++ +S
Sbjct: 150 PEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHH 209
Query: 88 QAVKQTA----ASAGLVDAPAPA 106
A + A L+ P PA
Sbjct: 210 AAAPAVSLVNNGPAALLPLPKPA 232
Score = 37.7 bits (86), Expect = 0.023
Identities = 26/82 (31%), Positives = 30/82 (36%), Gaps = 14/82 (17%)
Query: 36 PPPPPGPGAASASAAPPTASPGPERRPPPASAPAP-----QPAPTPSVGSSFFSSLSQAV 90
P PPP A P P RRP + PAP +P P S GS
Sbjct: 87 PEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGS---------C 137
Query: 91 KQTAASAGLVDAPAPAPAAARK 112
A+A + P PAPA K
Sbjct: 138 APVPAAAAVAAGPEPAPAGPAK 159
Score = 37.7 bits (86), Expect = 0.023
Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Query: 19 PNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGP---ERRPPPASAPAPQPAPT 75
P G+ P PPP G+A A+ AP A+ GP +P P +A A AP
Sbjct: 283 PPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAA---APA 339
Query: 76 PSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAA 110
P V + S + V+ +A + A PA AA
Sbjct: 340 PGVKA---ESPKRVVQAAPPAAQTLAASGPASTAA 371
Score = 35.4 bits (80), Expect = 0.11
Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQ 88
P P++P P P P AA PP S G P A+A A P P P+ G + + +
Sbjct: 108 PSPRRPLVPAGPAPPAAKLRP-PPEGSAGSCAPVPAAAAVAAGPEPAPA-GPAKPAGPAA 165
Query: 89 AVKQTAASAGLVDAPAPAPAAARKA 113
+ G P P P + A
Sbjct: 166 LAARAGPGPGPGPGPGPGPGPGKPA 190
Score = 34.7 bits (78), Expect = 0.20
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Query: 40 PGPGAASASAAPPTASPGPER---RPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAAS 96
PGPGAA+A+ AP + P+R PPA+ P + S Q + A+
Sbjct: 329 PGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAA 388
Query: 97 AGLVDAPAPAP 107
P PAP
Sbjct: 389 -----VPPPAP 394
Score = 31.2 bits (69), Expect = 2.2
Identities = 25/81 (30%), Positives = 30/81 (37%), Gaps = 7/81 (8%)
Query: 40 PGPGAASASAAPPTASPGPERRPPPASAPAP------QPA-PTPSVGSSFFSSLSQAVKQ 92
P A + AAP +PG PPPA P +P P+P A K
Sbjct: 67 PAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKL 126
Query: 93 TAASAGLVDAPAPAPAAARKA 113
G + AP PAAA A
Sbjct: 127 RPPPEGSAGSCAPVPAAAAVA 147
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 54.3 bits (129), Expect = 2e-07
Identities = 40/109 (36%), Positives = 43/109 (39%), Gaps = 37/109 (33%)
Query: 28 RPEPQQPPPPPP-------------PGPGAASA--------------SAAPPTASPGPER 60
+P QQ PPPPP P PG SA S APP + PGP
Sbjct: 92 QPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTP 151
Query: 61 RPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAA 109
PPPA AP AP P+ SS V T AG P P PAA
Sbjct: 152 TPPPAVTSAPPGAPPPTPPSS-------GVPTTPPQAG---GPPPPPAA 190
Score = 43.5 bits (101), Expect = 4e-04
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 30 EPQQPPPPPPPGPGAASASAAPPTASPGPERRPPP----ASAP--APQPAPTPSVGSSFF 83
+ QQ PPP P P PP P +++PPP +S P A P P P VGS+
Sbjct: 67 QQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPP 126
Query: 84 SSLSQAVKQTAASAGLVDAPAPAP 107
+S S A T ++G P P
Sbjct: 127 AS-SSAPPATPPTSGAPPGSGPGP 149
Score = 41.6 bits (96), Expect = 0.002
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 34 PPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVG 79
PP PPP P ++ PP A P PPPA+ P P P P G
Sbjct: 161 PPGAPPPTPPSSGVPTTPPQAGGPP---PPPAAVPGPGPGPKQGPG 203
Score = 41.2 bits (95), Expect = 0.002
Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 34 PPPPPPPGPGAASASAAPPTA-SPGPERRPPPASAPAPQPAPTPSVG 79
P P PPP +A A PPT S G PP A P P PA P G
Sbjct: 149 PTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPG 195
Score = 33.9 bits (76), Expect = 0.33
Identities = 24/94 (25%), Positives = 33/94 (35%), Gaps = 7/94 (7%)
Query: 21 GYMTDLQRPEP----QQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAP-- 74
G + D + P P Q P PGPG + P P +++ PP P PQ P
Sbjct: 26 GGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPH 85
Query: 75 -TPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAP 107
P Q ++ + P PAP
Sbjct: 86 QPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAP 119
Score = 32.3 bits (72), Expect = 0.97
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 7/45 (15%)
Query: 31 PQQPPPPPPPG-----PGAASASAAPPTASPGPERRPPPASAPAP 70
P PPP PP P A PP A PGP P P P P
Sbjct: 162 PGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGP--GPGPKQGPGP 204
Score = 30.0 bits (66), Expect = 4.8
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 8/49 (16%)
Query: 31 PQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVG 79
PQ PPPPP AA P PGP++ P P + P G
Sbjct: 179 PQAGGPPPPP--------AAVPGPGPGPKQGPGPGGPKGGKMPGGPKPG 219
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 53.5 bits (127), Expect = 4e-07
Identities = 25/49 (51%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPA-PTP 76
P+PQ PPPPPPP P S PP +P P PPP P P PA P+P
Sbjct: 1467 PQPQPPPPPPPPQPALPS---PPPLVAPTPSSPPPPPLPPPPPPAMPSP 1512
Score = 48.5 bits (114), Expect = 1e-05
Identities = 30/83 (36%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
Query: 31 PQQPPPPPPPGPGAASASA----APPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSL 86
P P PPP PG SA++ PP P PPPA P PQP P P S
Sbjct: 1426 PAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSP 1485
Query: 87 SQAVKQTAASAGLVDAPAPAPAA 109
V T +S P P P A
Sbjct: 1486 PPLVAPTPSSPPPPPLPPPPPPA 1508
Score = 47.0 bits (110), Expect = 4e-05
Identities = 20/49 (40%), Positives = 24/49 (48%)
Query: 28 RPEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTP 76
+P+P PPPPP P + AP +SP P PPP P P P P
Sbjct: 1468 QPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPP 1516
Score = 40.8 bits (94), Expect = 0.003
Identities = 30/83 (36%), Positives = 34/83 (40%), Gaps = 9/83 (10%)
Query: 26 LQRPEPQQPPPPP---PPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSF 82
L P P PPPPP PP P S PP A+ P +AP+P+ P
Sbjct: 1488 LVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDPELPDT---- 1543
Query: 83 FSSLSQAVKQ-TAASAGLVDAPA 104
L A KQ TAA G D A
Sbjct: 1544 -RPLHLAKKQETAAVCGETDEEA 1565
Score = 38.9 bits (89), Expect = 0.010
Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 4/98 (4%)
Query: 15 IANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPE---RRPPPASAPAPQ 71
+ LP+ P + PPP P P A + PP P P+ PPP AP P
Sbjct: 1436 LPGLPSANSNGTPEPPLLEEKPPPTP-PPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPS 1494
Query: 72 PAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAA 109
P P + ++ +A + AP PAA
Sbjct: 1495 SPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAA 1532
Score = 34.7 bits (78), Expect = 0.20
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 27 QRPEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSL 86
QRP QPPPPPPP A + + P R A +P P+P G +
Sbjct: 293 QRPASAQPPPPPPPA-HALQHYLSCGGSYPSMGHRANLACSPLGGGEPSPGAGEPSKAGP 351
Query: 87 SQAVKQTAASAGLVDAPAPA 106
S A TA ++G P A
Sbjct: 352 SGA---TAGASGRATGPEAA 368
Score = 34.3 bits (77), Expect = 0.26
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 13/98 (13%)
Query: 39 PPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAG 98
PP P S A P ++ G PP A AP P+P TP +S + +QT +A
Sbjct: 1670 PPVPVRRSGQAKNPVSAGGSSAPPPKAPAPPPKP-ETPEKTTS-----EKPPEQTPETA- 1722
Query: 99 LVDAPAPAPAAARKAKVLLVVDEPHADWAKCFRGKKVL 136
P P A K +L V E + K RG++ L
Sbjct: 1723 -----MPEPPAPEKPSLLRPV-EKEKEKEKVTRGERPL 1754
Score = 33.5 bits (75), Expect = 0.44
Identities = 36/122 (29%), Positives = 43/122 (35%), Gaps = 36/122 (29%)
Query: 28 RPEPQQPPPPPPPGPG----AASASAAPPTAS----------------PGPERRPP---- 63
RP P PPPPP P AS+SAA A P PER P
Sbjct: 228 RPGPPDPPPPPRHLPTQFNLLASSSAAAAAAEQSSPQLYNFSGAAPGPPPPERALPRQDT 287
Query: 64 -------PASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAP----APAPAAARK 112
PASA P P P P+ + S + A L +P P+P A
Sbjct: 288 VIKHYQRPASA-QPPPPPPPAHALQHYLSCGGSYPSMGHRANLACSPLGGGEPSPGAGEP 346
Query: 113 AK 114
+K
Sbjct: 347 SK 348
Score = 33.5 bits (75), Expect = 0.44
Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 16/70 (22%)
Query: 19 PNGYMTDLQRPE-PQQPPPPPP------------PGPGAASASA---APPTASPGPERRP 62
P+G + + P+ P PPPPP P P A+ P T P+ P
Sbjct: 778 PHGLLLEAGGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVHLLEPATRDGAPQPPP 837
Query: 63 PPASAPAPQP 72
PP P P P
Sbjct: 838 PPPPPPPPMP 847
Score = 32.7 bits (73), Expect = 0.74
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Query: 31 PQQPPPPPPPGP------GAASASAAPPTASPGPERRPPPASAP 68
PQ PPPPPPP P A S A+P P RP + P
Sbjct: 833 PQPPPPPPPPPPPMPLQLEAHLRSHGLEPAAPSPRLRPEESLDP 876
Score = 32.3 bits (72), Expect = 0.97
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 31 PQQPPPPPPPGPGAASASAAPPTASPGP----ERRPPPASAPAPQPAPTPSVGSSFFSSL 86
P QPP PPP PG A+ + P G + P P A Q PT S S+ +
Sbjct: 479 PPQPPSGPPP-PGLATCQSYSPDQLQGQLYGVQGEPYPGPAAHSQGLPTASPSLSYSTGH 537
Query: 87 SQAV 90
S A+
Sbjct: 538 SPAL 541
Score = 32.3 bits (72), Expect = 0.97
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPA 65
P P+ P PPP P + S PP +P PPA
Sbjct: 1692 PPPKAPAPPPKPETPEKTTSEKPPEQTPETAMPEPPA 1728
Score = 31.2 bits (69), Expect = 2.2
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 19/90 (21%)
Query: 32 QQPPPPPPPGPGAASASAAPPT------ASPGPE-----RRPPPASAP---APQPAPTPS 77
Q+ PPPPPP +A + PT + GP+ PPP P + P+P+PS
Sbjct: 761 QKSPPPPPP-----TAQSTQPTPHGLLLEAGGPDLPLVLPPPPPQLLPSVLSHAPSPSPS 815
Query: 78 VGSSFFSSLSQAVKQTAASAGLVDAPAPAP 107
L A + A P P P
Sbjct: 816 ASKVGVHLLEPATRDGAPQPPPPPPPPPPP 845
Score = 31.2 bits (69), Expect = 2.2
Identities = 28/100 (28%), Positives = 35/100 (35%), Gaps = 11/100 (11%)
Query: 35 PPPPPPGPGAASAS------AAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQ 88
P PP P +A + P A+P P PPP PAP P + S F S
Sbjct: 1012 PNKPPELPSTVNAEPLGLIQSGPHQAAPPPP--PPPPPPPAPASEPKGGLTSPIFCSTKP 1069
Query: 89 AVKQTAASAGLV---DAPAPAPAAARKAKVLLVVDEPHAD 125
+S L+ D P P + DE AD
Sbjct: 1070 KKLLKTSSFHLLRRRDPPFQTPKKLYAQEYEFEADEDKAD 1109
Score = 30.0 bits (66), Expect = 4.8
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 426 PQRPLTTQQPQSGTLKDPDSSKTPPQRPPPQGCLQYILDCNG 467
P+R L Q + P S++ PP PPP LQ+ L C G
Sbjct: 278 PERALPRQDTVIKHYQRPASAQ-PPPPPPPAHALQHYLSCGG 318
Score = 30.0 bits (66), Expect = 4.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 29 PEPQQPPPPPPPGPGAASAS 48
P PPPPPPP P A AS
Sbjct: 1034 PHQAAPPPPPPPPPPPAPAS 1053
Score = 29.6 bits (65), Expect = 6.3
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 10/103 (9%)
Query: 20 NGYMT--DLQRPEPQQPPPPPPP-------GPGAASASAAPPTASPGPERRPPPASAPAP 70
NG ++ D+ +P Q P P G G + P +P P R PP P P
Sbjct: 180 NGLLSPHDVLHLKPSQAPTVPSSLGFERLAGGGVLGPAGLGPAQTP-PYRPGPPDPPPPP 238
Query: 71 QPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAARKA 113
+ PT + S+ + A +Q++ AP P +A
Sbjct: 239 RHLPTQFNLLASSSAAAAAAEQSSPQLYNFSGAAPGPPPPERA 281
Score = 29.6 bits (65), Expect = 6.3
Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 14/56 (25%)
Query: 27 QRPEPQQPPPPPPPGPGA--ASASAAPPTASPGPE------------RRPPPASAP 68
Q P PPPPPPP P + +P S P+ RR PP P
Sbjct: 1036 QAAPPPPPPPPPPPAPASEPKGGLTSPIFCSTKPKKLLKTSSFHLLRRRDPPFQTP 1091
>gi|210031233 PR domain containing 6 [Homo sapiens]
Length = 595
Score = 50.8 bits (120), Expect = 3e-06
Identities = 38/99 (38%), Positives = 44/99 (44%), Gaps = 18/99 (18%)
Query: 26 LQRPEPQQPPPPPPPGPGAASASAAPPTASPGPER-RPPPASAPAPQPAPTPSVGSSFFS 84
L P+P QPPPPPPP P A P P+ RP PAS + P S S+ +
Sbjct: 44 LSAPQPLQPPPPPPP----------PERAEPPPDSLRPRPASLSSASSTPASSSTSASSA 93
Query: 85 SLSQAVKQTAASAGLVDAP-------APAPAAARKAKVL 116
S A AA AGL P AP AAA A+ L
Sbjct: 94 SSCAAAAAAAALAGLSALPVSQLPVFAPLAAAAVAAEPL 132
Score = 29.6 bits (65), Expect = 6.3
Identities = 22/76 (28%), Positives = 29/76 (38%)
Query: 38 PPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASA 97
P G G S A S +PPP P + P P +SLS A A+S+
Sbjct: 28 PHGGAGPLKGSGAAGLLSAPQPLQPPPPPPPPERAEPPPDSLRPRPASLSSASSTPASSS 87
Query: 98 GLVDAPAPAPAAARKA 113
+ + AAA A
Sbjct: 88 TSASSASSCAAAAAAA 103
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 50.8 bits (120), Expect = 3e-06
Identities = 28/72 (38%), Positives = 32/72 (44%), Gaps = 10/72 (13%)
Query: 19 PNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTA---------SPGPERRPP-PASAP 68
P+ + P P PPPPPP PG S APP+A SP P PP P P
Sbjct: 526 PSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLP 585
Query: 69 APQPAPTPSVGS 80
P P P P G+
Sbjct: 586 PPPPPPPPPPGT 597
Score = 40.8 bits (94), Expect = 0.003
Identities = 25/65 (38%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 29 PEPQQPPPPP-PPGPGAASASAAPPTASPGPERR-PPPASAPAPQPAPTPSVGSSFFSSL 86
P P P PPP PP PG PP PG + PPP P P P P S L
Sbjct: 567 PLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPGGPPDALGRRDSEL 626
Query: 87 SQAVK 91
VK
Sbjct: 627 GPGVK 631
Score = 32.7 bits (73), Expect = 0.74
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 11 DSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAP 70
D+ I LP T P P P P A A+ P A+P P PP P+P
Sbjct: 497 DAVSIEILPVAVATPSGGDAPTPGVPTGSPSPDLAPAAEPAPGAAPPPP--PPLPGLPSP 554
Query: 71 QPAP 74
Q AP
Sbjct: 555 QEAP 558
Score = 32.7 bits (73), Expect = 0.74
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 10/44 (22%)
Query: 25 DLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAP 68
DL P P PPPP GP PP P P PPP P
Sbjct: 583 DLPPPPPPPPPPPGTDGP-------VPPPPPPPP---PPPGGPP 616
Score = 30.8 bits (68), Expect = 2.8
Identities = 39/144 (27%), Positives = 49/144 (34%), Gaps = 49/144 (34%)
Query: 5 LRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPP----------------------GP 42
LR R S+S+ + + PEP++ PP P GP
Sbjct: 443 LRERFSESTAMG-------ASRRPPEPEKAPPAAPTRPSALELKVEELEEKGLIRILRGP 495
Query: 43 GAA-------------SASAAP----PTASPGPERRPPPASAPAPQPAPTPSVGSSFFSS 85
G A S AP PT SP P+ PA+ PAP AP P S
Sbjct: 496 GDAVSIEILPVAVATPSGGDAPTPGVPTGSPSPDL--APAAEPAPGAAPPPPPPLPGLPS 553
Query: 86 LSQAVKQTAASA-GLVDAPAPAPA 108
+A A L +P P PA
Sbjct: 554 PQEAPPSAPPQAPPLPGSPEPPPA 577
Score = 30.4 bits (67), Expect = 3.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 24 TDLQRPEPQQPPPPPPPGP 42
TD P P PPPPPP GP
Sbjct: 597 TDGPVPPPPPPPPPPPGGP 615
Score = 30.0 bits (66), Expect = 4.8
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 31 PQQPPPPPPPGPGAASASAAPPTASPGPERRPP 63
P PPPPPPPG + PG + + P
Sbjct: 603 PPPPPPPPPPGGPPDALGRRDSELGPGVKAKKP 635
Score = 29.3 bits (64), Expect = 8.2
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 14/62 (22%)
Query: 29 PEPQQPPPPPPP--GPGAASA-SAAPPT-----ASPGPERRPP--PASAP----APQPAP 74
P P P P P P A A AAPP P P+ PP P AP +P+P P
Sbjct: 517 PTPGVPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPP 576
Query: 75 TP 76
P
Sbjct: 577 AP 578
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 50.1 bits (118), Expect = 5e-06
Identities = 36/104 (34%), Positives = 45/104 (43%), Gaps = 21/104 (20%)
Query: 34 PPPPPPPGPG--AASASAAPPTASPG---------PERRPPPASAPAP--------QPAP 74
PPPPPPP P A A P PG P RP P++ PAP +PAP
Sbjct: 124 PPPPPPPAPQSQAPGGPEAQPFREPGLRPRILLCAPPARPAPSAPPAPPAPPESTVRPAP 183
Query: 75 TPSVGSSFFSSLSQAV--KQTAASAGLVDAPAPAPAAARKAKVL 116
G S +SS+S + +SA P A AA+ + K L
Sbjct: 184 PTRPGESSYSSISHVIYNNHQDSSASPRKRPGEATAASSEIKAL 227
>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
Length = 1338
Score = 50.1 bits (118), Expect = 5e-06
Identities = 38/104 (36%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
Query: 19 PNGYMTDLQRPEPQQPPPPPPPGPGAASASAA---PPTASPGPERRPPPASAPAPQPAPT 75
P G + L PE P PP PP P A+ +S+ PP +PG R PPASA A A
Sbjct: 998 PVGSLDGLLSPEASSPYPPLPPRPSASPSSSLQPPPPPPAPGELYRLPPASAVA--TAQG 1055
Query: 76 PSVGSSFFSSLSQAVKQTAASAGLVDAP------APAPAAARKA 113
P SS S T + G+ P P P AAR A
Sbjct: 1056 PGAASSLSSDTGDNGDYTEMAFGVAATPPQPIAAPPKPEAARVA 1099
Score = 33.1 bits (74), Expect = 0.57
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Query: 10 SDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPA 69
SDS + L + D P+ +P P G+ +P +SP P P P+++P+
Sbjct: 967 SDSRQRSPLSDYMNLDFSSPKSPKPGAPSGHPVGSLDGLLSPEASSPYPPLPPRPSASPS 1026
Query: 70 P--QPAPTPSVGSSFFSSLSQAVKQTAASAG 98
QP P P + + TA G
Sbjct: 1027 SSLQPPPPPPAPGELYRLPPASAVATAQGPG 1057
Score = 32.3 bits (72), Expect = 0.97
Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 13/96 (13%)
Query: 10 SDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPA 69
SD + + P G + + +R EPQ P P AASA A PT +PP P+
Sbjct: 820 SDQYVLMSSPVGRILEEERLEPQATPGPSQ----AASAFGAGPT-------QPPHPVVPS 868
Query: 70 PQPAPTPSVGSSFFSSLSQAVKQTAAS-AGLVDAPA 104
P P+ F +AV+ T S GL P+
Sbjct: 869 P-VRPSGGRPEGFLGQRGRAVRPTRLSLEGLPSLPS 903
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 50.1 bits (118), Expect = 5e-06
Identities = 30/79 (37%), Positives = 38/79 (48%)
Query: 31 PQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAV 90
P PP P P AA+A+A PPT +P P P A+APA P + ++ S
Sbjct: 108 PPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQP 167
Query: 91 KQTAASAGLVDAPAPAPAA 109
A A + AP PAPAA
Sbjct: 168 GPRAQRAAPLAAPPPAPAA 186
Score = 45.4 bits (106), Expect = 1e-04
Identities = 37/101 (36%), Positives = 40/101 (39%), Gaps = 19/101 (18%)
Query: 19 PNGYMTDLQRPEPQQPP-PPPPPGPGAASASAAPPTA---------SPGPERRPPPASAP 68
P G P P PPPPP P AA+A A P A SPGP + P A
Sbjct: 115 PRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRA 174
Query: 69 APQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAA 109
AP AP P+ A A AG AP PA AA
Sbjct: 175 APLAAPPPA---------PAAPPAVAPPAGPRRAPPPAVAA 206
Score = 40.8 bits (94), Expect = 0.003
Identities = 25/59 (42%), Positives = 26/59 (44%), Gaps = 17/59 (28%)
Query: 29 PEPQQPPP---------PPPPGPGAASASAAPPTASP--GPERRPPPASAPAPQPAPTP 76
P P QP P PPP P AAPP +P GP R PPPA A P P P
Sbjct: 162 PGPAQPGPRAQRAAPLAAPPPAP------AAPPAVAPPAGPRRAPPPAVAAREPPLPPP 214
Score = 35.0 bits (79), Expect = 0.15
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 6/58 (10%)
Query: 29 PEPQQPPPPPPPG-----PGAASASAAPP-TASPGPERRPPPASAPAPQPAPTPSVGS 80
P P PP PP P A A+ PP P P P P PQP P P G+
Sbjct: 182 PAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGA 239
Score = 30.0 bits (66), Expect = 4.8
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Query: 29 PEPQQPPPP---PPPGPGAASASAA 50
P+ QQPPPP PPP GA A A
Sbjct: 221 PQQQQPPPPQPQPPPEGGAVRAGGA 245
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 49.3 bits (116), Expect = 8e-06
Identities = 25/49 (51%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 31 PQQPPPPP--PPGPGAASASAAPPTASPGPERRPP-PASAPAPQPAPTP 76
P PPPPP PPGP AS + PP PGP PP P++ P P P P P
Sbjct: 310 PLAPPPPPPLPPGPAQASVALPPP---PGPPPPPPLPSTGPPPPPPPPP 355
Score = 45.8 bits (107), Expect = 8e-05
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 34 PPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQ 88
PP PPPP P ++ PP P P + PPP P P PAP F +S+S+
Sbjct: 333 PPGPPPPPPLPSTGPPPPPPPPPLPNQVPPP---PPPPPAPPLPASGFFLASMSE 384
Score = 31.6 bits (70), Expect = 1.7
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVG---SSFFSS 85
P P Q PPPPPP P ++ AS + RP A A A V + F S
Sbjct: 355 PLPNQVPPPPPPPPAPPLPASGFFLASMSEDNRPLTGLAAAIAGAKLRKVSRMEDTSFPS 414
Query: 86 LSQAVKQTAASA 97
A+ +AS+
Sbjct: 415 GGNAIGVNSASS 426
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 49.3 bits (116), Expect = 8e-06
Identities = 25/49 (51%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 31 PQQPPPPP--PPGPGAASASAAPPTASPGPERRPP-PASAPAPQPAPTP 76
P PPPPP PPGP AS + PP PGP PP P++ P P P P P
Sbjct: 310 PLAPPPPPPLPPGPAQASVALPPP---PGPPPPPPLPSTGPPPPPPPPP 355
Score = 45.8 bits (107), Expect = 8e-05
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 34 PPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQ 88
PP PPPP P ++ PP P P + PPP P P PAP F +S+S+
Sbjct: 333 PPGPPPPPPLPSTGPPPPPPPPPLPNQVPPP---PPPPPAPPLPASGFFLASMSE 384
Score = 31.6 bits (70), Expect = 1.7
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVG---SSFFSS 85
P P Q PPPPPP P ++ AS + RP A A A V + F S
Sbjct: 355 PLPNQVPPPPPPPPAPPLPASGFFLASMSEDNRPLTGLAAAIAGAKLRKVSRMEDTSFPS 414
Query: 86 LSQAVKQTAASA 97
A+ +AS+
Sbjct: 415 GGNAIGVNSASS 426
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 48.9 bits (115), Expect = 1e-05
Identities = 33/90 (36%), Positives = 38/90 (42%), Gaps = 12/90 (13%)
Query: 29 PEPQQP-PPPPPPGPGAASASAAPPTASPGPERRPPPASAP----APQPAPTPSVGSSFF 83
P P P PPPPP P A A P+ S GP P PA P A P PS+G+S
Sbjct: 1267 PPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGAS-- 1324
Query: 84 SSLSQAVKQTAASAGLVDAPAPAPAAARKA 113
K + A + PA P AA A
Sbjct: 1325 -----PAKPPSPGAPALHVPAKPPRAAAAA 1349
Score = 47.4 bits (111), Expect = 3e-05
Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 12/92 (13%)
Query: 31 PQQPPPPPPPGPGAASAS----AAPPTASPGPERRPPPASAPAP--------QPAPTPSV 78
P+ PPPP P P A A +A P+ +P P R+PP A A P PA PS
Sbjct: 1272 PKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSP 1331
Query: 79 GSSFFSSLSQAVKQTAASAGLVDAPAPAPAAA 110
G+ ++ + AA+A AP P A
Sbjct: 1332 GAPALHVPAKPPRAAAAAAAAAAAPPAPPEGA 1363
Score = 42.0 bits (97), Expect = 0.001
Identities = 36/121 (29%), Positives = 50/121 (41%), Gaps = 22/121 (18%)
Query: 15 IANLPNGYMTDLQRPEPQQPPPP----PPPGPGAASASAAPPTASPGPE----RRPPPAS 66
+A LP+G P P + PP PP P + AS A P + P +PP A+
Sbjct: 1287 VAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAA 1346
Query: 67 APAPQPA---PTPSVGSSFFSSLSQAVKQTAASAGLV-----------DAPAPAPAAARK 112
A A A P P G+S S Q +++T+A DA P +AA K
Sbjct: 1347 AAAAAAAAAPPAPPEGASPGDSARQKLEETSACLAAALQAVEEKIRQEDAQGPRDSAAEK 1406
Query: 113 A 113
+
Sbjct: 1407 S 1407
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 20 NGYMTDLQRPE------PQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPA 73
NG T +RP P+ PPPPPP P + PP P E R P +P+P
Sbjct: 1172 NGTGTVRRRPASEQAGPPELPPPPPPAEPPPTDLAHLPPLPPPEGEARKPAKPPVSPKPV 1231
Query: 74 PTPSV 78
T V
Sbjct: 1232 LTQPV 1236
Score = 38.9 bits (89), Expect = 0.010
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 16/93 (17%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAP------------QPAPTP 76
P ++ P P P P A PP SP P PPP +AP P P+P P
Sbjct: 1245 PTSKKVPLPGPGSPEVKRAHGTPPPVSPKP---PPPPTAPKPVKAVAGLPSGSAGPSPAP 1301
Query: 77 SVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAA 109
S ++L++ T S G A P+P A
Sbjct: 1302 SPARQPPAALAKP-PGTPPSLGASPAKPPSPGA 1333
Score = 38.1 bits (87), Expect = 0.018
Identities = 43/151 (28%), Positives = 55/151 (36%), Gaps = 15/151 (9%)
Query: 18 LPNG--YMTDLQRPEPQQPPPPP----PPGPGAASASAAPPTASPGPERRPPPASAPAPQ 71
LP G + T Q P +P P P GP A+A P P+ PP +P+
Sbjct: 767 LPPGTSHFTPPQTPTKTRPGSPQALGGPHGPAPATAKVKPT-----PQLLPPTERPMSPR 821
Query: 72 PAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAARKAKVLLVVDEPHADWAKCFR 131
P F L Q V+ A AP P P A L + E A+ + +
Sbjct: 822 SLPQSPTHRGFAYVLPQPVEGEVGPAAPGPAPPPVPTA---VPTLCLPPEADAEPGRPKK 878
Query: 132 GKKVLGDYDIKVEQAEFSELNLVAHADGTYA 162
L Y + E EL LV A G YA
Sbjct: 879 RAHSLNRYAASDSEPERDEL-LVPAAAGPYA 908
Score = 35.0 bits (79), Expect = 0.15
Identities = 35/120 (29%), Positives = 40/120 (33%), Gaps = 31/120 (25%)
Query: 29 PEPQQPPPPPP---------PGPGAASASAAPPTASPGP---------ERRPPPASAPAP 70
P P P PPP P P + A P SP P + P P S P
Sbjct: 1192 PPPPPPAEPPPTDLAHLPPLPPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVP 1251
Query: 71 QPAP----------TPSVGSSFFSSLSQAVKQTAASAGLVD---APAPAPAAARKAKVLL 117
P P TP S A K A AGL P+PAP+ AR+ L
Sbjct: 1252 LPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAAL 1311
Score = 33.5 bits (75), Expect = 0.44
Identities = 28/114 (24%), Positives = 41/114 (35%), Gaps = 18/114 (15%)
Query: 26 LQRPEPQ-------QPPPPPPPGPGAASA-----------SAAPPTASPGPERRPPPASA 67
L+R PQ + PPPP P P + S A GP P
Sbjct: 618 LRRKAPQSLEVMAIESPPPPEPTPADCQSPKMTTFQDSELSDELQAAMTGPAEVGPTTEK 677
Query: 68 PAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAARKAKVLLVVDE 121
P+ PTP + SSL + ++S L+ P P++ ++DE
Sbjct: 678 PSSHLPPTPRATTRQDSSLGGRARHMSSSQELLGDGPPGPSSPMSRSQEYLLDE 731
Score = 30.8 bits (68), Expect = 2.8
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 6/50 (12%)
Query: 30 EPQQPPPPPPP----GPGAASASAAPPTASPGPERRPPPASAPAPQPAPT 75
E + P PPPP G + P + GP PPP P +P PT
Sbjct: 1156 EREAGPEPPPPLSVYHNGTGTVRRRPASEQAGPPELPPP--PPPAEPPPT 1203
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 48.9 bits (115), Expect = 1e-05
Identities = 30/83 (36%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQ 88
P P PPPPPPP PG S+ P PPP S A P P P S S
Sbjct: 600 PPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSS 659
Query: 89 AVKQTAASAGLVDAPAPAPAAAR 111
TA + P P P +AR
Sbjct: 660 LPGGTA-----IPPPPPLPGSAR 677
Score = 44.7 bits (104), Expect = 2e-04
Identities = 30/79 (37%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 34 PPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQT 93
P PP PP PG S + PP +PG PPP P P P P P G SS T
Sbjct: 572 PVPPAPPLPGD-SGTIIPPPPAPGDSTTPPPPPPPPPPPPPLP--GGVCISSPPSLPGGT 628
Query: 94 AAS-----AGLVDAPAPAP 107
A S +G P P P
Sbjct: 629 AISPPPPLSGDATIPPPPP 647
Score = 43.1 bits (100), Expect = 6e-04
Identities = 24/57 (42%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 29 PEPQQP-----PPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQ-PAPTPSVG 79
P P P PPPPPP PG A PP GP PPP P P P P +G
Sbjct: 681 PPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMG 737
Score = 39.3 bits (90), Expect = 0.008
Identities = 24/67 (35%), Positives = 27/67 (40%), Gaps = 6/67 (8%)
Query: 16 ANLPNGYMTDLQRPEPQQP--PPPPPPGPGAASASAAPPTASPGPERRPPPASAPA---- 69
++LP G P P PPPPPP PG+A PP PPP P
Sbjct: 658 SSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGI 717
Query: 70 PQPAPTP 76
P P P P
Sbjct: 718 PPPPPFP 724
Score = 38.9 bits (89), Expect = 0.010
Identities = 35/98 (35%), Positives = 41/98 (41%), Gaps = 15/98 (15%)
Query: 17 NLPNGYMTDLQRPEPQQ------PPPPPPPGPGAASASAAP-PTASPGPERRPPPASAPA 69
+LP G T + P P PPPP P G G S S+ P TA P P P P SA
Sbjct: 623 SLPGG--TAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPP--PLPGSARI 678
Query: 70 PQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAP 107
P P P P GS + + AG+ P P P
Sbjct: 679 P-PPPPPLPGS---AGIPPPPPPLPGEAGMPPPPPPLP 712
Score = 35.0 bits (79), Expect = 0.15
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 8/52 (15%)
Query: 31 PQQPPP-------PPPPGPGAASASAAPPTASP-GPERRPPPASAPAPQPAP 74
P PPP PPPP P PP P GP PPP P P P
Sbjct: 692 PPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPP 743
Score = 30.4 bits (67), Expect = 3.7
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 13/64 (20%)
Query: 29 PEPQQP-----PPPPPPGPGAASASAAPPTAS--------PGPERRPPPASAPAPQPAPT 75
P P P PPPPPP PG PP PG PPP AP
Sbjct: 694 PPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPV 753
Query: 76 PSVG 79
G
Sbjct: 754 LPFG 757
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 48.9 bits (115), Expect = 1e-05
Identities = 30/83 (36%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQ 88
P P PPPPPPP PG S+ P PPP S A P P P S S
Sbjct: 609 PPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSS 668
Query: 89 AVKQTAASAGLVDAPAPAPAAAR 111
TA + P P P +AR
Sbjct: 669 LPGGTA-----IPPPPPLPGSAR 686
Score = 44.7 bits (104), Expect = 2e-04
Identities = 30/79 (37%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 34 PPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQT 93
P PP PP PG S + PP +PG PPP P P P P P G SS T
Sbjct: 581 PVPPAPPLPGD-SGTIIPPPPAPGDSTTPPPPPPPPPPPPPLP--GGVCISSPPSLPGGT 637
Query: 94 AAS-----AGLVDAPAPAP 107
A S +G P P P
Sbjct: 638 AISPPPPLSGDATIPPPPP 656
Score = 43.1 bits (100), Expect = 6e-04
Identities = 24/57 (42%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 29 PEPQQP-----PPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQ-PAPTPSVG 79
P P P PPPPPP PG A PP GP PPP P P P P +G
Sbjct: 690 PPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMG 746
Score = 39.3 bits (90), Expect = 0.008
Identities = 24/67 (35%), Positives = 27/67 (40%), Gaps = 6/67 (8%)
Query: 16 ANLPNGYMTDLQRPEPQQP--PPPPPPGPGAASASAAPPTASPGPERRPPPASAPA---- 69
++LP G P P PPPPPP PG+A PP PPP P
Sbjct: 667 SSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGI 726
Query: 70 PQPAPTP 76
P P P P
Sbjct: 727 PPPPPFP 733
Score = 38.9 bits (89), Expect = 0.010
Identities = 35/98 (35%), Positives = 41/98 (41%), Gaps = 15/98 (15%)
Query: 17 NLPNGYMTDLQRPEPQQ------PPPPPPPGPGAASASAAP-PTASPGPERRPPPASAPA 69
+LP G T + P P PPPP P G G S S+ P TA P P P P SA
Sbjct: 632 SLPGG--TAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPP--PLPGSARI 687
Query: 70 PQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAP 107
P P P P GS + + AG+ P P P
Sbjct: 688 P-PPPPPLPGS---AGIPPPPPPLPGEAGMPPPPPPLP 721
Score = 35.0 bits (79), Expect = 0.15
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 8/52 (15%)
Query: 31 PQQPPP-------PPPPGPGAASASAAPPTASP-GPERRPPPASAPAPQPAP 74
P PPP PPPP P PP P GP PPP P P P
Sbjct: 701 PPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPP 752
Score = 30.4 bits (67), Expect = 3.7
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 13/64 (20%)
Query: 29 PEPQQP-----PPPPPPGPGAASASAAPPTAS--------PGPERRPPPASAPAPQPAPT 75
P P P PPPPPP PG PP PG PPP AP
Sbjct: 703 PPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPV 762
Query: 76 PSVG 79
G
Sbjct: 763 LPFG 766
>gi|145309324 FH2 domain containing 1 [Homo sapiens]
Length = 1143
Score = 48.9 bits (115), Expect = 1e-05
Identities = 22/60 (36%), Positives = 27/60 (45%)
Query: 15 IANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAP 74
IA P + P P PPPPPPP P + + P++ P P P P P P P P
Sbjct: 18 IATAPGFMIGQTPPPAPPPPPPPPPPSPPCSCSREECPSSPPPPPPPPLPGEPPIPPPPP 77
Score = 37.7 bits (86), Expect = 0.023
Identities = 21/51 (41%), Positives = 22/51 (43%), Gaps = 7/51 (13%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVG 79
P P PPPP PP S S +SP P PPP P P P P G
Sbjct: 35 PPPPPPPPPSPP----CSCSREECPSSPPP---PPPPPLPGEPPIPPPPPG 78
Score = 36.6 bits (83), Expect = 0.052
Identities = 17/47 (36%), Positives = 19/47 (40%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPT 75
P P PPP PP ++PP P P PP P P PT
Sbjct: 36 PPPPPPPPSPPCSCSREECPSSPPPPPPPPLPGEPPIPPPPPGLPPT 82
>gi|14149904 anthrax toxin receptor 1 isoform 1 precursor [Homo
sapiens]
Length = 564
Score = 48.9 bits (115), Expect = 1e-05
Identities = 27/61 (44%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 18 LPNGYMTDLQRPEPQQPPPPPPPG-PGAASASAAPPTASPGPERRPPPASAPAPQPAPTP 76
L N Y T P P PPPP P P ++ PP SP P PPP AP P AP P
Sbjct: 497 LNNAYHTSSPPPAPIYTPPPPAPHCPPPPPSAPTPPIPSP-PSTLPPPPQAPPPNRAPPP 555
Query: 77 S 77
S
Sbjct: 556 S 556
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 48.1 bits (113), Expect = 2e-05
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGS----SFFS 84
P+ PPPPPPP PP + P PPP P P P P P G+ +
Sbjct: 359 PDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPPFTGADGQPAIPP 418
Query: 85 SLSQAVKQTAASAGLVDAPAPAPAAARKAKVLLVVDE 121
LS K ++ + DA + +A R+ L V+E
Sbjct: 419 PLSDTTKPKSSLPAVSDARSDLLSAIRQGFQLRRVEE 455
Score = 39.3 bits (90), Expect = 0.008
Identities = 25/88 (28%), Positives = 30/88 (34%), Gaps = 8/88 (9%)
Query: 28 RPEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAP--------APQPAPTPSVG 79
+P PP PPPP P PP G PPP S P A P P P
Sbjct: 313 KPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPPA 372
Query: 80 SSFFSSLSQAVKQTAASAGLVDAPAPAP 107
+ + + + Q A P P P
Sbjct: 373 ADYPTLPPPPLSQPTGGAPPPPPPPPPP 400
Score = 37.7 bits (86), Expect = 0.023
Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 7/65 (10%)
Query: 19 PNGYMTDLQRPEPQQPPP------PPPPGPGAASASAAPPTASPGPERRPPPASAPAPQP 72
P G P PPP PPPP P + PP SP P P P A P P
Sbjct: 309 PPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSP-PSFPPHPDFAAPPPP 367
Query: 73 APTPS 77
P P+
Sbjct: 368 PPPPA 372
Score = 37.4 bits (85), Expect = 0.030
Identities = 21/52 (40%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
Query: 31 PQQPPPPPPPG--PGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGS 80
P PPP PP G PG A PP P PPP P P P GS
Sbjct: 297 PSHPPPAPPLGSPPGPKPGFAPPPAPPP-----PPPPMIGIPPPPPPVGFGS 343
Score = 32.7 bits (73), Expect = 0.74
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Query: 29 PEPQQP---PPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPS 77
P P P PP P PG A PP G PPP +P P PS
Sbjct: 300 PPPAPPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPS 351
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 48.1 bits (113), Expect = 2e-05
Identities = 29/82 (35%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Query: 27 QRPEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSL 86
+ PEP P PPPPP P A ASP P P P AP P P T + ++
Sbjct: 22 ESPEPPPPWPPPPPPPAPPPAPPLLSEASPEPIPEPCPELAPGPCPEATSESATELYTEP 81
Query: 87 SQAVKQTAASAGLVDAPAPAPA 108
+ AS PAP PA
Sbjct: 82 TPEPATEPAS-----EPAPEPA 98
Score = 43.9 bits (102), Expect = 3e-04
Identities = 27/95 (28%), Positives = 38/95 (40%), Gaps = 22/95 (23%)
Query: 26 LQRPEPQQPPPPPP-------------PGPGAASASAAPPTASPGPERRPPPASAPAPQP 72
+ P P+ P P P P P A+ A+ P P E P PA+ PAP+P
Sbjct: 54 IPEPCPELAPGPCPEATSESATELYTEPTPEPATEPASEPAPEPATEPAPEPATEPAPEP 113
Query: 73 APTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAP 107
AP P+ +++ + L P PAP
Sbjct: 114 APEPA---------TESAPEPTPEPALESVPEPAP 139
Score = 43.5 bits (101), Expect = 4e-04
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQ 88
PEP P P P A+ A P P PE P PA+ AP+P P P++ S+ +
Sbjct: 83 PEPATEPASEP-APEPATEPAPEPATEPAPEPAPEPATESAPEPTPEPAL-----ESVPE 136
Query: 89 AVKQTAASAGLVDAPAPAP 107
+ AP P P
Sbjct: 137 PAPELTPEVAPELAPEPTP 155
Score = 37.7 bits (86), Expect = 0.023
Identities = 30/94 (31%), Positives = 37/94 (39%), Gaps = 24/94 (25%)
Query: 29 PEPQQPPPPPP-------PGPGAASASAAPPTASPGPERRPPPAS------AP--APQPA 73
PEP P P P P P A+ SA PT P E P PA AP AP+P
Sbjct: 95 PEPATEPAPEPATEPAPEPAPEPATESAPEPTPEPALESVPEPAPELTPEVAPELAPEPT 154
Query: 74 PTPSVGSSFFSSLSQAVKQTAASAGLVDAPAPAP 107
P P +++ + A P+PAP
Sbjct: 155 PEP---------VTELAPEFCPEAAPEFRPSPAP 179
Score = 31.6 bits (70), Expect = 1.7
Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 18/86 (20%)
Query: 33 QPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQ----------PAPTPSVGSSF 82
Q PP G A + PP P P PPPA PAP P P P +
Sbjct: 9 QGTAPPQDGEQPAESPEPPPPWPPPP---PPPAPPPAPPLLSEASPEPIPEPCPELAP-- 63
Query: 83 FSSLSQAVKQTAASAGLVDAPAPAPA 108
+A ++A L P P PA
Sbjct: 64 -GPCPEATSESATE--LYTEPTPEPA 86
Score = 31.2 bits (69), Expect = 2.2
Identities = 23/78 (29%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Query: 44 AASASAAPPTASPGPERRP-PPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDA 102
AA+ APP P P PP P P P P P LS+A + A
Sbjct: 6 AAAQGTAPPQDGEQPAESPEPPPPWPPPPPPPAPPPAPPL---LSEASPEPIPEPCPELA 62
Query: 103 PAPAPAAARKAKVLLVVD 120
P P P A ++ L +
Sbjct: 63 PGPCPEATSESATELYTE 80
Score = 29.3 bits (64), Expect = 8.2
Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 32/95 (33%)
Query: 29 PEP---QQPPPPPPPGPGAASASAAPPTASP------------GPERRPPPA-------- 65
PEP P P P P A A PT P PE RP PA
Sbjct: 127 PEPALESVPEPAPELTPEVAPELAPEPTPEPVTELAPEFCPEAAPEFRPSPAPCLLQCPV 186
Query: 66 --------SAPAPQPAPTPSVGSSFFSSLSQAVKQ 92
++P+P P+P+P S +S + + +K+
Sbjct: 187 DTRERGLKTSPSPSPSPSPRTPMS-WSRIKKILKE 220
>gi|62945417 dystrophia myotonica-containing WD repeat motif protein
[Homo sapiens]
Length = 674
Score = 48.1 bits (113), Expect = 2e-05
Identities = 28/67 (41%), Positives = 33/67 (49%), Gaps = 16/67 (23%)
Query: 27 QRPEPQQPPPPPP-----PGPGAASASAAPPTASPGPERRPP-----------PASAPAP 70
Q P P QPP PPP GPGAA +++PP A PGP P P SA A
Sbjct: 51 QTPVPPQPPQPPPGPASASGPGAAGPASSPPPAGPGPGPALPAVRLSLVRLGEPDSAGAG 110
Query: 71 QPAPTPS 77
+P TP+
Sbjct: 111 EPPATPA 117
>gi|90903231 huntingtin [Homo sapiens]
Length = 3144
Score = 47.8 bits (112), Expect = 2e-05
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 27 QRPEPQQPPPPPPPGPGAASASAAPPTASP-GPERRPPPASAPAPQPAPTPSV 78
Q+ + QQ PPPPPP P PP A P P+ +PPP P P P P P+V
Sbjct: 33 QQQQQQQQPPPPPPPPPPPQLPQPPPQAQPLLPQPQPPP---PPPPPPPGPAV 82
Score = 38.9 bits (89), Expect = 0.010
Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Query: 27 QRPEPQQPPPPPP----PGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTP 76
Q+P P PPPPPP P P A P P P PPP A A +P P
Sbjct: 39 QQPPPPPPPPPPPQLPQPPPQAQPLLPQPQPPPPPPP--PPPGPAVAEEPLHRP 90
Score = 37.0 bits (84), Expect = 0.039
Identities = 13/20 (65%), Positives = 15/20 (75%)
Query: 26 LQRPEPQQPPPPPPPGPGAA 45
L +P+P PPPPPPPGP A
Sbjct: 64 LPQPQPPPPPPPPPPGPAVA 83
Score = 31.2 bits (69), Expect = 2.2
Identities = 14/29 (48%), Positives = 14/29 (48%)
Query: 31 PQQPPPPPPPGPGAASASAAPPTASPGPE 59
PQ PPPPPP P A A P P E
Sbjct: 65 PQPQPPPPPPPPPPGPAVAEEPLHRPKKE 93
>gi|4503519 eukaryotic translation initiation factor 3, subunit 5
epsilon, 47kDa [Homo sapiens]
Length = 357
Score = 47.8 bits (112), Expect = 2e-05
Identities = 32/77 (41%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Query: 34 PPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQT 93
PP P P P AA AS PT P PA+AP P AP S + ++ + A QT
Sbjct: 11 PPATPTPVPAAAPASVPAPT--------PAPAAAPVPAAAPASSSDPAAAAAATAAPGQT 62
Query: 94 AASAGLVDAPAPAPAAA 110
ASA APA PA A
Sbjct: 63 PASA---QAPAQTPAPA 76
Score = 41.2 bits (95), Expect = 0.002
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 47 ASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQA-VKQTAASAGLVDAPAP 105
A+ A P ++P P PA+APA PAPTP+ ++ + + A AA+A AP
Sbjct: 2 ATPAVPVSAPPATPTPVPAAAPASVPAPTPAPAAAPVPAAAPASSSDPAAAAAATAAPGQ 61
Query: 106 APAAAR 111
PA+A+
Sbjct: 62 TPASAQ 67
Score = 38.1 bits (87), Expect = 0.018
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 44 AASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASA-GLVDA 102
A SA P T +P P P AP P PA P ++ SS A A +A G A
Sbjct: 5 AVPVSAPPATPTPVPAAAPASVPAPTPAPAAAPVPAAAPASSSDPAAAAAATAAPGQTPA 64
Query: 103 PAPAPA 108
A APA
Sbjct: 65 SAQAPA 70
Score = 35.0 bits (79), Expect = 0.15
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query: 19 PNGYMTDLQRPEPQQPPPPPP-----PGPGAASASAAPPTASPGPERRP--PPASAPAPQ 71
P T + P P P P P P AA AS++ P A+ P PASA AP
Sbjct: 11 PPATPTPVPAAAPASVPAPTPAPAAAPVPAAAPASSSDPAAAAAATAAPGQTPASAQAPA 70
Query: 72 PAPTPSV 78
P P++
Sbjct: 71 QTPAPAL 77
Score = 29.6 bits (65), Expect = 6.3
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 16 ANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAP---PTASPGPERRPPPASAPAPQP 72
A++P P P P AA+A+AAP P ++ P + P PA P
Sbjct: 24 ASVPAPTPAPAAAPVPAAAPASSSDPAAAAAATAAPGQTPASAQAPAQTPAPALPGPALP 83
Query: 73 APTP 76
P P
Sbjct: 84 GPFP 87
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 47.8 bits (112), Expect = 2e-05
Identities = 30/75 (40%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 20 NGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERRP-PPASAPAPQPAPTPSV 78
NG +T P P PPPPPPP P PP P E P PP + P P P P
Sbjct: 545 NGPVTPPMPPPPPPPPPPPPPPP----PPPPPPLPGPAAETVPAPPLAPPLPSAPPLPGT 600
Query: 79 GSS--FFSSLSQAVK 91
S F+S AVK
Sbjct: 601 SSPTVVFNSGLAAVK 615
Score = 40.8 bits (94), Expect = 0.003
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 7/49 (14%)
Query: 35 PPPPPPGPGAA-------SASAAPPTASPGPERRPPPASAPAPQPAPTP 76
PPPPPP P ++ + PP P P PPP P P P P P
Sbjct: 527 PPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPPLP 575
Score = 40.0 bits (92), Expect = 0.005
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 31 PQQPPPPP-PPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTP 76
P PPPPP PP P P P PPP P P P P P
Sbjct: 525 PLPPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPP 571
Score = 38.9 bits (89), Expect = 0.010
Identities = 18/48 (37%), Positives = 19/48 (39%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTP 76
P P PPP PP + P T P PPP P P P P P
Sbjct: 525 PLPPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPP 572
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 47.8 bits (112), Expect = 2e-05
Identities = 22/47 (46%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPPTASPGPERR---PPPASAPAPQP 72
PEPQ+PPP PPP P AA + PP A P + P PAP P
Sbjct: 923 PEPQEPPPGPPPSPAAAPEAVPPPPAPPSYSDKGVQTPSKGTPAPLP 969
Score = 47.0 bits (110), Expect = 4e-05
Identities = 39/114 (34%), Positives = 48/114 (42%), Gaps = 29/114 (25%)
Query: 22 YMTDLQRPEPQQPPPPP-PPGPGAASASAAPPTASPGPERR---------------PPPA 65
Y P P++P PP PPGP +A AP A+P RR PPP
Sbjct: 705 YCASRHDPPPRRPAAPPGPPGP---AAPPAPSPAAPVRTRRRRKLYELHAAGAPPPPPPG 761
Query: 66 SAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAP---------APAPAAA 110
APAP+ +P P GS L+ A A+ G +D APAPA A
Sbjct: 762 HAPAPE-SPRPGSGSGSGPGLAPARSPGPAADGPIDLSKKPRRPLPGAPAPALA 814
Score = 34.7 bits (78), Expect = 0.20
Identities = 17/47 (36%), Positives = 21/47 (44%)
Query: 30 EPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTP 76
EP+ P P PG + S P SP P R S+P P +P P
Sbjct: 469 EPEAAPILGPGEPGPQAPSRTPSPRSPAPARVKAELSSPTPGSSPVP 515
Score = 32.3 bits (72), Expect = 0.97
Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 6/79 (7%)
Query: 31 PQQPPPPPPPGPGAA-SASAAPPTASPGPE-RRPPPASAPAPQPAPTPSVGSSFFSSLSQ 88
P P P P P A+ + P GPE + PPP P+P AP S S
Sbjct: 895 PADRGPSPAPAPAASPQPGSRGPRDGLGPEPQEPPPGPPPSPAAAPEAVPPPPAPPSYSD 954
Query: 89 AVKQTAASAGLVDAPAPAP 107
QT + PAP P
Sbjct: 955 KGVQTPSKG----TPAPLP 969
Score = 32.0 bits (71), Expect = 1.3
Identities = 21/69 (30%), Positives = 23/69 (33%), Gaps = 26/69 (37%)
Query: 35 PPPPPPGPGAASASAAP--------------------------PTASPGPERRPPPASAP 68
P PPPG A+A P P A PG E R P P
Sbjct: 841 PAAPPPGALGLPAAACPYCPPNGPVRGDLLEHFRLAHGLLLGAPLAGPGVEARTPADRGP 900
Query: 69 APQPAPTPS 77
+P PAP S
Sbjct: 901 SPAPAPAAS 909
Score = 30.8 bits (68), Expect = 2.8
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 48 SAAPPTASPGPERRPP--PASAPAPQPAPTP 76
+A P A PGP R PP PA AP+ +P P
Sbjct: 611 AARRPKAPPGPARAPPGQPAEPDAPRSSPGP 641
Score = 29.6 bits (65), Expect = 6.3
Identities = 13/44 (29%), Positives = 18/44 (40%)
Query: 32 QQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPT 75
Q+ P P P +A ++ PP P P P+P PT
Sbjct: 35 QKATAPEAPSPPSADVNSPPPLPPPTSPGGPKELEGQEPEPRPT 78
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 47.4 bits (111), Expect = 3e-05
Identities = 39/144 (27%), Positives = 57/144 (39%), Gaps = 11/144 (7%)
Query: 18 LPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPS 77
LP G + L P P PPP PPPG +S A P P P++AP P P
Sbjct: 415 LPQGEVQGL--PPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPP 472
Query: 78 VGSSFFSSLSQAVKQTAASAGLVDAPAPAPAAARKAKVLLVVDEPHADWAKCFR------ 131
S S+ + + + DA + A RK L V+E AK R
Sbjct: 473 SPPSQVIPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERIENDVA 532
Query: 132 ---GKKVLGDYDIKVEQAEFSELN 152
+++ +Y + +EF E++
Sbjct: 533 TILSRRIAVEYSDSEDDSEFDEVD 556
Score = 41.2 bits (95), Expect = 0.002
Identities = 31/90 (34%), Positives = 36/90 (40%), Gaps = 13/90 (14%)
Query: 35 PPPPPPGPGAASASAAPPTASPGP---ERRP--------PPASAPAPQPAPTPSVGSSFF 83
PPPPPP GA A P S E RP P +P P P P P +
Sbjct: 278 PPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLPSALST 337
Query: 84 SSLSQAVKQTAASAGLVDAPAPAPAAARKA 113
SSL ++ T V P P PA A +A
Sbjct: 338 SSLRASMTSTPPPP--VPPPPPPPATALQA 365
Score = 38.1 bits (87), Expect = 0.018
Identities = 28/92 (30%), Positives = 34/92 (36%), Gaps = 12/92 (13%)
Query: 29 PEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPP-----ASAPAPQPAPTPSVGSSFF 83
P P PPPP P +S A+ + P P PPP APA P P P
Sbjct: 322 PTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAP------- 374
Query: 84 SSLSQAVKQTAASAGLVDAPAPAPAAARKAKV 115
++ V A P+P AR A V
Sbjct: 375 LQIAPGVLHPAPPPIAPPLVQPSPPVARAAPV 406
Score = 37.7 bits (86), Expect = 0.023
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 34 PPPPPPPGPGAAS--ASAAPPTASP---GP---ERRPPPASAPAPQPAPTPSVGSSFFSS 85
PP PPPP P A + A A PP +P P PPP + P QP+P + + +
Sbjct: 350 PPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVCET 409
Query: 86 LSQAVKQTAASAGLVDAPAPAP 107
+ GL P P P
Sbjct: 410 VPVHPLPQGEVQGLPPPPPPPP 431
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,592,946
Number of Sequences: 37866
Number of extensions: 1457651
Number of successful extensions: 56838
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 1163
Number of HSP's that attempted gapping in prelim test: 19112
Number of HSP's gapped (non-prelim): 21391
length of query: 478
length of database: 18,247,518
effective HSP length: 106
effective length of query: 372
effective length of database: 14,233,722
effective search space: 5294944584
effective search space used: 5294944584
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.