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Search of human proteins with 19923973
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19923973 potassium channel tetramerisation domain containing
12 [Homo sapiens]
(325 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19923973 potassium channel tetramerisation domain containing ... 660 0.0
gi|38198663 potassium channel tetramerisation domain containing ... 315 5e-86
gi|55926200 potassium channel tetramerisation domain containing ... 315 5e-86
gi|71143104 potassium channel tetramerisation domain containing ... 88 9e-18
gi|189571693 potassium channel tetramerisation domain containing... 85 8e-17
gi|189571691 potassium channel tetramerisation domain containing... 85 8e-17
gi|194018443 potassium channel tetramerisation domain containing... 79 7e-15
gi|194018441 potassium channel tetramerisation domain containing... 79 7e-15
gi|194018439 potassium channel tetramerisation domain containing... 79 7e-15
gi|40807368 potassium channel regulator isoform 2 [Homo sapiens] 75 8e-14
gi|27734697 potassium channel regulator isoform 1 [Homo sapiens] 75 8e-14
gi|146198864 potassium channel tetramerisation domain containing... 72 5e-13
gi|218505694 potassium channel tetramerisation domain containing... 72 7e-13
gi|209969708 potassium channel tetramerisation domain containing... 72 7e-13
gi|40217617 potassium channel tetramerisation domain containing ... 72 7e-13
gi|45387953 potassium channel tetramerization domain containing ... 68 1e-11
gi|142356950 potassium channel tetramerisation domain containing... 65 1e-10
gi|23308551 potassium channel tetramerisation domain containing ... 62 5e-10
gi|53829365 potassium channel tetramerisation domain containing ... 62 9e-10
gi|9506651 potassium channel tetramerisation domain containing 5... 59 4e-09
gi|46255026 potassium channel tetramerisation domain containing ... 56 5e-08
gi|39753959 potassium channel tetramerisation domain containing ... 56 5e-08
gi|169234778 potassium channel tetramerisation domain containing... 54 2e-07
gi|13994353 potassium channel tetramerisation domain containing ... 54 2e-07
gi|223005950 SH3KBP1 binding protein 1 [Homo sapiens] 53 3e-07
gi|10863937 tumor necrosis factor, alpha-induced protein 1 [Homo... 52 9e-07
gi|30578412 potassium channel tetramerisation domain containing ... 49 5e-06
gi|51036594 potassium channel tetramerisation domain containing ... 49 6e-06
gi|169184031 PREDICTED: similar to potassium channel tetramerisa... 48 1e-05
gi|169179790 PREDICTED: similar to potassium channel tetramerisa... 48 1e-05
>gi|19923973 potassium channel tetramerisation domain containing 12
[Homo sapiens]
Length = 325
Score = 660 bits (1704), Expect = 0.0
Identities = 325/325 (100%), Positives = 325/325 (100%)
Query: 1 MALADSTRGLPNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLL 60
MALADSTRGLPNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLL
Sbjct: 1 MALADSTRGLPNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLL 60
Query: 61 WRMFTQQQPQELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYF 120
WRMFTQQQPQELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYF
Sbjct: 61 WRMFTQQQPQELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYF 120
Query: 121 ELPELVRRLGAPQQPGPGPPPSRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPTLE 180
ELPELVRRLGAPQQPGPGPPPSRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPTLE
Sbjct: 121 ELPELVRRLGAPQQPGPGPPPSRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPTLE 180
Query: 181 LASRSPSGGAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCG 240
LASRSPSGGAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCG
Sbjct: 181 LASRSPSGGAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCG 240
Query: 241 KTSLAKEVFGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTC 300
KTSLAKEVFGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTC
Sbjct: 241 KTSLAKEVFGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTC 300
Query: 301 AFASSTDQSEDKIWTSYTEYVFCRE 325
AFASSTDQSEDKIWTSYTEYVFCRE
Sbjct: 301 AFASSTDQSEDKIWTSYTEYVFCRE 325
>gi|38198663 potassium channel tetramerisation domain containing 8
[Homo sapiens]
Length = 473
Score = 315 bits (806), Expect = 5e-86
Identities = 172/323 (53%), Positives = 213/323 (65%), Gaps = 43/323 (13%)
Query: 17 GGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQ------ 70
G + ++ P FP++VELNVGGQVYVT+ T++SVPDS L MF+ P+
Sbjct: 27 GASAAAAPGPCAPSPFPEVVELNVGGQVYVTKHSTLLSVPDSTLASMFSPSSPRGGARRR 86
Query: 71 -ELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRL 129
EL RDS+ RFF+DRDGFLFRY+LDYLRD QL LP++FPE+ RL REAEYF+L +LV+ L
Sbjct: 87 GELPRDSRARFFIDRDGFLFRYVLDYLRDKQLALPEHFPEKERLLREAEYFQLTDLVKLL 146
Query: 130 GAPQQPGPGPPPSRRGVHKEGSLGDE--------LLPLGYSEPEQQEGASAGAPSPTLEL 181
V K+ SL DE + G S+ GA+A PS
Sbjct: 147 SPK-------------VTKQNSLNDEGCQSDLEDNVSQGSSDALLLRGAAAAVPS----- 188
Query: 182 ASRSPSGGAAGPLLTPSQSLDGSRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGK 241
+ GG G +RSG++T+GYRGSYT RD QADAKFRRVARI VCG+
Sbjct: 189 GPGAHGGGGGGGAQ--------DKRSGFLTLGYRGSYTTVRDNQADAKFRRVARIMVCGR 240
Query: 242 TSLAKEVFGDTLNESRDPDRPPERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCA 301
+LAKEVFGDTLNESRDPDR PE+YTSR+YLKF +LEQAFD+LSE+GFHMVAC+S+GT A
Sbjct: 241 IALAKEVFGDTLNESRDPDRQPEKYTSRFYLKFTYLEQAFDRLSEAGFHMVACNSSGTAA 300
Query: 302 FASSTDQSEDKIWTSYTEYVFCR 324
F + +DKIW+SYTEY+F R
Sbjct: 301 FVN--QYRDDKIWSSYTEYIFFR 321
>gi|55926200 potassium channel tetramerisation domain containing 16
[Homo sapiens]
Length = 428
Score = 315 bits (806), Expect = 5e-86
Identities = 167/302 (55%), Positives = 207/302 (68%), Gaps = 41/302 (13%)
Query: 26 SAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQP--QELARDSKGRFFLD 83
SA P FP++VELNVGGQVY TR T++S+P SLLW+MF+ ++ +LA+DSKGRFF+D
Sbjct: 17 SAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRDTANDLAKDSKGRFFID 76
Query: 84 RDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRLGAPQQPGPGPPPSR 143
RDGFLFRYILDYLRD Q+VLPD+FPE+ RL+REAEYF+LP+LV+ L P + P
Sbjct: 77 RDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYFQLPDLVKLL-TPDEIKQSP---- 131
Query: 144 RGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPTLELASRSPSGGAAGPLLTPSQSLDG 203
DE + + Q G+ + PS L
Sbjct: 132 ----------DEFCHSDFEDASQ----------------------GSDTRICPPSSLLPA 159
Query: 204 SRRSGYITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEVFGDTLNESRDPDRPP 263
R+ G+IT+GYRGS T+GR+ QADAKFRRV RI VCG+ SLAKEVFG+TLNESRDPDR P
Sbjct: 160 DRKWGFITVGYRGSCTLGREGQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAP 219
Query: 264 ERYTSRYYLKFNFLEQAFDKLSESGFHMVACSSTGTCAFASSTDQSEDKIWTSYTEYVFC 323
ERYTSR+YLKF LE+AFD LSE GFHMVAC+S+ T +F + ++DKIW+SYTEYVF
Sbjct: 220 ERYTSRFYLKFKHLERAFDMLSECGFHMVACNSSVTASFIN--QYTDDKIWSSYTEYVFY 277
Query: 324 RE 325
RE
Sbjct: 278 RE 279
>gi|71143104 potassium channel tetramerisation domain containing 21
[Homo sapiens]
Length = 260
Score = 88.2 bits (217), Expect = 9e-18
Identities = 44/96 (45%), Positives = 65/96 (67%), Gaps = 2/96 (2%)
Query: 34 DIVELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDSKGRFFLDRDGFLFRYIL 93
D + LNVGG++Y T T+ S PDS+L MF+ + P + RDS+G F+DRDG +FRYIL
Sbjct: 3 DPITLNVGGKLYTTSLATLTSFPDSMLGAMFSGKMPTK--RDSQGNCFIDRDGKVFRYIL 60
Query: 94 DYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRL 129
++LR L LP+ F E L+REA+++++ L+ L
Sbjct: 61 NFLRTSHLDLPEDFQEMGLLRREADFYQVQPLIEAL 96
>gi|189571693 potassium channel tetramerisation domain containing 6
[Homo sapiens]
Length = 237
Score = 85.1 bits (209), Expect = 8e-17
Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Query: 31 LFPDIVELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDSKGRFFLDRDGFLFR 90
+ D V LNVGG +Y T T+ PDS+L MF P ARD +G +F+DRDG LFR
Sbjct: 9 MMTDPVTLNVGGHLYTTSLTTLTRYPDSMLGAMFGGDFPT--ARDPQGNYFIDRDGPLFR 66
Query: 91 YILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRLGAPQ 133
Y+L++LR +L LP F E L++EA+++++ L++ L P+
Sbjct: 67 YVLNFLRTSELTLPLDFKEFDLLRKEADFYQIEPLIQCLNDPK 109
>gi|189571691 potassium channel tetramerisation domain containing 6
[Homo sapiens]
Length = 237
Score = 85.1 bits (209), Expect = 8e-17
Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Query: 31 LFPDIVELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDSKGRFFLDRDGFLFR 90
+ D V LNVGG +Y T T+ PDS+L MF P ARD +G +F+DRDG LFR
Sbjct: 9 MMTDPVTLNVGGHLYTTSLTTLTRYPDSMLGAMFGGDFPT--ARDPQGNYFIDRDGPLFR 66
Query: 91 YILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRLGAPQ 133
Y+L++LR +L LP F E L++EA+++++ L++ L P+
Sbjct: 67 YVLNFLRTSELTLPLDFKEFDLLRKEADFYQIEPLIQCLNDPK 109
>gi|194018443 potassium channel tetramerisation domain containing 15
isoform 2 [Homo sapiens]
Length = 283
Score = 78.6 bits (192), Expect = 7e-15
Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 36 VELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDS-KGRFFLDRDGFLFRYILD 94
V ++VGG +Y + T+ PDS + R+F +P + DS K +F+DRDG +FRY+L
Sbjct: 58 VHIDVGGHMYTSSLATLTKYPDSRISRLFNGTEP--IVLDSLKQHYFIDRDGEIFRYVLS 115
Query: 95 YLRDLQLVLPDYFPERSRLQREAEYFELPELVRRLGAPQQ 134
+LR +L+LPD F + S L EA Y++L +VR L QQ
Sbjct: 116 FLRTSKLLLPDDFKDFSLLYEEARYYQLQPMVRELERWQQ 155
>gi|194018441 potassium channel tetramerisation domain containing 15
isoform 2 [Homo sapiens]
Length = 283
Score = 78.6 bits (192), Expect = 7e-15
Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 36 VELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDS-KGRFFLDRDGFLFRYILD 94
V ++VGG +Y + T+ PDS + R+F +P + DS K +F+DRDG +FRY+L
Sbjct: 58 VHIDVGGHMYTSSLATLTKYPDSRISRLFNGTEP--IVLDSLKQHYFIDRDGEIFRYVLS 115
Query: 95 YLRDLQLVLPDYFPERSRLQREAEYFELPELVRRLGAPQQ 134
+LR +L+LPD F + S L EA Y++L +VR L QQ
Sbjct: 116 FLRTSKLLLPDDFKDFSLLYEEARYYQLQPMVRELERWQQ 155
>gi|194018439 potassium channel tetramerisation domain containing 15
isoform 1 [Homo sapiens]
Length = 234
Score = 78.6 bits (192), Expect = 7e-15
Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 36 VELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDS-KGRFFLDRDGFLFRYILD 94
V ++VGG +Y + T+ PDS + R+F +P + DS K +F+DRDG +FRY+L
Sbjct: 58 VHIDVGGHMYTSSLATLTKYPDSRISRLFNGTEP--IVLDSLKQHYFIDRDGEIFRYVLS 115
Query: 95 YLRDLQLVLPDYFPERSRLQREAEYFELPELVRRLGAPQQ 134
+LR +L+LPD F + S L EA Y++L +VR L QQ
Sbjct: 116 FLRTSKLLLPDDFKDFSLLYEEARYYQLQPMVRELERWQQ 155
>gi|40807368 potassium channel regulator isoform 2 [Homo sapiens]
Length = 229
Score = 75.1 bits (183), Expect = 8e-14
Identities = 42/93 (45%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Query: 34 DIVELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDSKGRFFLDRDGFLFRYIL 93
++V LNVGG+++ TR T+ P S L RM + + + G+ F+DRDG LF +IL
Sbjct: 5 ELVTLNVGGKIFTTRFSTIKQFPASRLARMLDGRDQE--FKMVGGQIFVDRDGDLFSFIL 62
Query: 94 DYLRDLQLVLPDYFPERSRLQREAEYFELPELV 126
D+LR QL+LP F + RLQREA ++EL LV
Sbjct: 63 DFLRTHQLLLPTEFSDYLRLQREALFYELRSLV 95
>gi|27734697 potassium channel regulator isoform 1 [Homo sapiens]
Length = 272
Score = 75.1 bits (183), Expect = 8e-14
Identities = 42/93 (45%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Query: 34 DIVELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDSKGRFFLDRDGFLFRYIL 93
++V LNVGG+++ TR T+ P S L RM + + + G+ F+DRDG LF +IL
Sbjct: 5 ELVTLNVGGKIFTTRFSTIKQFPASRLARMLDGRDQE--FKMVGGQIFVDRDGDLFSFIL 62
Query: 94 DYLRDLQLVLPDYFPERSRLQREAEYFELPELV 126
D+LR QL+LP F + RLQREA ++EL LV
Sbjct: 63 DFLRTHQLLLPTEFSDYLRLQREALFYELRSLV 95
>gi|146198864 potassium channel tetramerisation domain containing 4
[Homo sapiens]
Length = 259
Score = 72.4 bits (176), Expect = 5e-13
Identities = 36/95 (37%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Query: 35 IVELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDSKGRFFLDRDGFLFRYILD 94
++ LNVGG +Y+T++ T+ PD+ L + + D+ G +F+DRDG LFR++L+
Sbjct: 34 LMTLNVGGYLYITQKQTLTKYPDTFLEGIVNGKILCPF--DADGHYFIDRDGLLFRHVLN 91
Query: 95 YLRDLQLVLPDYFPERSRLQREAEYFELPELVRRL 129
+LR+ +L+LP+ F E L +EAE+F+L L +
Sbjct: 92 FLRNGELLLPEGFRENQLLAQEAEFFQLKGLAEEV 126
>gi|218505694 potassium channel tetramerisation domain containing 1
isoform b [Homo sapiens]
Length = 865
Score = 72.0 bits (175), Expect = 7e-13
Identities = 36/92 (39%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 36 VELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDS-KGRFFLDRDGFLFRYILD 94
V ++VGG +Y + T+ P+S + R+F +P + DS K +F+DRDG +FRYIL+
Sbjct: 640 VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEP--IVLDSLKQHYFIDRDGQMFRYILN 697
Query: 95 YLRDLQLVLPDYFPERSRLQREAEYFELPELV 126
+LR +L++PD F + + L EA+YF+L ++
Sbjct: 698 FLRTSKLLIPDDFKDYTLLYEEAKYFQLQPML 729
>gi|209969708 potassium channel tetramerisation domain containing 1
isoform a [Homo sapiens]
Length = 257
Score = 72.0 bits (175), Expect = 7e-13
Identities = 36/92 (39%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 36 VELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDS-KGRFFLDRDGFLFRYILD 94
V ++VGG +Y + T+ P+S + R+F +P + DS K +F+DRDG +FRYIL+
Sbjct: 32 VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEP--IVLDSLKQHYFIDRDGQMFRYILN 89
Query: 95 YLRDLQLVLPDYFPERSRLQREAEYFELPELV 126
+LR +L++PD F + + L EA+YF+L ++
Sbjct: 90 FLRTSKLLIPDDFKDYTLLYEEAKYFQLQPML 121
>gi|40217617 potassium channel tetramerisation domain containing 1
isoform a [Homo sapiens]
Length = 257
Score = 72.0 bits (175), Expect = 7e-13
Identities = 36/92 (39%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 36 VELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDS-KGRFFLDRDGFLFRYILD 94
V ++VGG +Y + T+ P+S + R+F +P + DS K +F+DRDG +FRYIL+
Sbjct: 32 VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEP--IVLDSLKQHYFIDRDGQMFRYILN 89
Query: 95 YLRDLQLVLPDYFPERSRLQREAEYFELPELV 126
+LR +L++PD F + + L EA+YF+L ++
Sbjct: 90 FLRTSKLLIPDDFKDYTLLYEEAKYFQLQPML 121
>gi|45387953 potassium channel tetramerization domain containing 18
[Homo sapiens]
Length = 426
Score = 68.2 bits (165), Expect = 1e-11
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 34 DIVELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDSKGRFFLDRDGFLFRYIL 93
D++ LNVGG +Y RR ++ DS+L MF+ + P L D G +DRDG LF+Y+L
Sbjct: 12 DVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFP--LKTDESGACVIDRDGRLFKYLL 69
Query: 94 DYLRDLQLVLPDYFPERSRLQREAEYFELP 123
DYL ++ +P R LQ EA+YF +P
Sbjct: 70 DYLHG-EVQIPTDEQTRIALQEEADYFGIP 98
>gi|142356950 potassium channel tetramerisation domain containing 14
[Homo sapiens]
Length = 255
Score = 64.7 bits (156), Expect = 1e-10
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
Query: 30 PLFPDIVELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDSKGRFFLDRDGFLF 89
P +VELNVGG+ + T T+ P S L MF+ + + D++GRFF+DR F
Sbjct: 29 PTMSTVVELNVGGEFHTTTLGTLRKFPGSKLAEMFSSLA--KASTDAEGRFFIDRPSTYF 86
Query: 90 RYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRL 129
R ILDYLR Q V + PE + REA+++E+ LV+ L
Sbjct: 87 RPILDYLRTGQ-VPTQHIPE---VYREAQFYEIKPLVKLL 122
>gi|23308551 potassium channel tetramerisation domain containing 7
[Homo sapiens]
Length = 289
Score = 62.4 bits (150), Expect = 5e-10
Identities = 37/104 (35%), Positives = 61/104 (58%), Gaps = 11/104 (10%)
Query: 29 PPLFPDIVELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDSKGRFFLDRDGFL 88
P FP++V LN+GG + TR T+ D++L MF+ + + DS+GR+F+DRDG
Sbjct: 46 PQEFPEVVPLNIGGAHFTTRLSTLRCYEDTMLAAMFSGR--HYIPTDSEGRYFIDRDGTH 103
Query: 89 FRYILDYLRDLQLVLPDYFPERSRLQ---REAEYFELPELVRRL 129
F +L++LR L P R R++ +EA+Y+ + L+ +L
Sbjct: 104 FGDVLNFLRSGDL------PPRERVRAVYKEAQYYAIGPLLEQL 141
>gi|53829365 potassium channel tetramerisation domain containing 2
[Homo sapiens]
Length = 263
Score = 61.6 bits (148), Expect = 9e-10
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 15/120 (12%)
Query: 9 GLPNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQ 68
G P GGGG + V LNVGG +VT R T+ P S L R+ Q+
Sbjct: 60 GPPERAGGGGAARW-------------VRLNVGGTYFVTTRQTLGREPKSFLCRLCCQED 106
Query: 69 PQ-ELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVR 127
P+ + +D G + +DRD F IL+YLR +L++ E L+ EAE++ + LVR
Sbjct: 107 PELDSDKDETGAYLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLE-EAEFYNIASLVR 165
>gi|9506651 potassium channel tetramerisation domain containing 5
[Homo sapiens]
Length = 234
Score = 59.3 bits (142), Expect = 4e-09
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 3 LADSTRGLPNGGGGGG-----GSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPD 57
L RG G GGG +G + + P V LNVGG ++T R T+ P
Sbjct: 8 LLSPARGGIGAGLGGGLCRRCSAGLGALAQRPGSVSKWVRLNVGGTYFLTTRQTLCRDPK 67
Query: 58 SLLWRMFTQQQPQELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREA 117
S L+R+ + +D G + +DRD F +L+YLR +LV+ E L+ EA
Sbjct: 68 SFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGVLE-EA 126
Query: 118 EYFELPELVR 127
E++ + L++
Sbjct: 127 EFYNITSLIK 136
>gi|46255026 potassium channel tetramerisation domain containing 3
[Homo sapiens]
Length = 815
Score = 55.8 bits (133), Expect = 5e-08
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 17 GGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDS 76
GG GS ++A +IV+LNVGG + T R T++ +PDS + + + RD
Sbjct: 3 GGHCGSFPAAAAGS--GEIVQLNVGGTRFSTSRQTLMWIPDSFFSSLLSGR--ISTLRDE 58
Query: 77 KGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRL 129
G F+DRD F IL++LR +L L + L+ EAE++ + LVRRL
Sbjct: 59 TGAIFIDRDPAAFAPILNFLRTKELDLRGV--SINVLRHEAEFYGITPLVRRL 109
>gi|39753959 potassium channel tetramerisation domain containing 9
[Homo sapiens]
Length = 389
Score = 55.8 bits (133), Expect = 5e-08
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 34 DIVELNVGGQVYVTRRCTVVSV-PDSLLWRMFTQQQPQELARDSKGRFFLDRDGFLFRYI 92
D + LNVGG+ + T R T+V+ PDS+L MF + +D +G F +DR F I
Sbjct: 89 DWLTLNVGGRYFTTTRSTLVNKEPDSMLAHMFKDKGVWGNKQDHRGAFLIDRSPEYFEPI 148
Query: 93 LDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRLGA----PQQPGPGPPPSRR 144
L+YLR QL++ D L+ EA +F + L+ L Q P P SR+
Sbjct: 149 LNYLRHGQLIVNDGINLLGVLE-EARFFGIDSLIEHLEVAIKNSQPPEDHSPISRK 203
>gi|169234778 potassium channel tetramerisation domain containing 17
[Homo sapiens]
Length = 297
Score = 53.9 bits (128), Expect = 2e-07
Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 11 PNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQ 70
P G GG +G + V LNVGG V++T R T+ S L R+ ++ Q
Sbjct: 17 PPAGAGGRAAGG---------WGKWVRLNVGGTVFLTTRQTLCREQKSFLSRLCQGEELQ 67
Query: 71 ELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVR 127
RD G + +DRD F IL++LR +LVL E L+ EAE++ + L+R
Sbjct: 68 S-DRDETGAYLIDRDPTYFGPILNFLRHGKLVLDKDMAEEGVLE-EAEFYNIGPLIR 122
>gi|13994353 potassium channel tetramerisation domain containing 10
[Homo sapiens]
Length = 313
Score = 53.5 bits (127), Expect = 2e-07
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 36 VELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDSKGRFFLDRDGFLFRYILDY 95
V+LNVGG +Y T T+ D++L MF+ + E+ DS+G +DR G F IL+Y
Sbjct: 34 VKLNVGGALYYTTMQTLTK-QDTMLKAMFSGRM--EVLTDSEGWILIDRCGKHFGTILNY 90
Query: 96 LRDLQLVLPDYFPERSRLQREAEYFELPELVRRLGAPQQ 134
LRD + LP+ E L EA+Y+ + LV A Q
Sbjct: 91 LRDGAVPLPESRREIEELLAEAKYYLVQGLVEECQAALQ 129
>gi|223005950 SH3KBP1 binding protein 1 [Homo sapiens]
Length = 707
Score = 53.1 bits (126), Expect = 3e-07
Identities = 58/211 (27%), Positives = 84/211 (39%), Gaps = 39/211 (18%)
Query: 2 ALADSTRGLPNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLLW 61
A A + G+P+ G G +++ LNVGG+ + T R T+ +PDS
Sbjct: 3 AAATAAEGVPSRGPPG----------------EVIHLNVGGKRFSTSRQTLTWIPDSFFS 46
Query: 62 RMFTQQQPQELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFE 121
+ + + +D G F+DRD +F IL++LR + L S L EA+++
Sbjct: 47 SLLSGR--ISTLKDETGAIFIDRDPTVFAPILNFLRTKE--LDPRGVHGSSLLHEAQFYG 102
Query: 122 LPELVRRLGAPQQ---------------PGPGPPPSRRGVHK---EGSLGDELLPLGYSE 163
L LVRRL ++ P P P RR H LG P+ S
Sbjct: 103 LTPLVRRLQLREELDRSSCGNVLFNGYLPPPVFPVKRRNRHSLVGPQQLGGRPAPVRRSN 162
Query: 164 PEQQEGASAGAPSPTL-ELASRSPSGGAAGP 193
+AG L E SPSG P
Sbjct: 163 TMPPNLGNAGLLGRMLDEKTPPSPSGQPEEP 193
>gi|10863937 tumor necrosis factor, alpha-induced protein 1 [Homo
sapiens]
Length = 316
Score = 51.6 bits (122), Expect = 9e-07
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 14 GGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELA 73
G GGG G+ V+LNVGG +Y T ++ D++L MF+ + E+
Sbjct: 19 GFKGGGLGNK-----------YVQLNVGGSLYYTT-VRALTRHDTMLKAMFSGRM--EVL 64
Query: 74 RDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELV 126
D +G +DR G F IL+YLRD + LP E L EA+Y+ + LV
Sbjct: 65 TDKEGWILIDRCGKHFGTILNYLRDDTITLPQNRQEIKELMAEAKYYLIQGLV 117
>gi|30578412 potassium channel tetramerisation domain containing 13
[Homo sapiens]
Length = 329
Score = 49.3 bits (116), Expect = 5e-06
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 30 PLFPD--IVELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDSKGRFFLDRDGF 87
PL P+ V+LNVGG ++ T T+ D++L MF+ + E+ D+ G +DR G
Sbjct: 35 PLTPNSKYVKLNVGGSLHYTTLRTLTG-QDTMLKAMFSGRV--EVLTDAGGWVLIDRSGR 91
Query: 88 LFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELV 126
F IL+YLRD + LP+ E L EA Y+ + L+
Sbjct: 92 HFGTILNYLRDGSVPLPESTRELGELLGEARYYLVQGLI 130
>gi|51036594 potassium channel tetramerisation domain containing 11
[Homo sapiens]
Length = 232
Score = 48.9 bits (115), Expect = 6e-06
Identities = 27/89 (30%), Positives = 48/89 (53%)
Query: 69 PQELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRR 128
P L G +F+DRDG FR+IL++LR +L LP + E + L+ EA+++++ L+
Sbjct: 13 PPNLNSQGGGHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLDA 72
Query: 129 LGAPQQPGPGPPPSRRGVHKEGSLGDELL 157
L + P P+ +H + + L+
Sbjct: 73 LRELEASQGTPAPTAALLHADVDVSPRLV 101
>gi|169184031 PREDICTED: similar to potassium channel
tetramerisation domain containing 9 [Homo sapiens]
Length = 261
Score = 48.1 bits (113), Expect = 1e-05
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 34 DIVELNVGGQVYVTRRCTVVSV-PDSLLWRMFTQQQPQELARDSKGRFFLDRDGFLFRYI 92
D + L+VGGQ + T T+V+ PD +L MF + +D +G F +D+ F I
Sbjct: 89 DWLTLHVGGQYFTTTWSTLVNKEPDIMLAHMFKDKGVWGNKQDHRGAFLIDQSPEYFEPI 148
Query: 93 LDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRL 129
L+YLR QL++ D L+ EA +F + L+ L
Sbjct: 149 LNYLRHGQLIVNDGIDLLGVLE-EARFFGIDSLIEHL 184
>gi|169179790 PREDICTED: similar to potassium channel
tetramerisation domain containing 9 [Homo sapiens]
Length = 261
Score = 48.1 bits (113), Expect = 1e-05
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 34 DIVELNVGGQVYVTRRCTVVSV-PDSLLWRMFTQQQPQELARDSKGRFFLDRDGFLFRYI 92
D + L+VGGQ + T T+V+ PD +L MF + +D +G F +D+ F I
Sbjct: 89 DWLTLHVGGQYFTTTWSTLVNKEPDIMLAHMFKDKGVWGNKQDHRGAFLIDQSPEYFEPI 148
Query: 93 LDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRL 129
L+YLR QL++ D L+ EA +F + L+ L
Sbjct: 149 LNYLRHGQLIVNDGIDLLGVLE-EARFFGIDSLIEHL 184
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.136 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,015,214
Number of Sequences: 37866
Number of extensions: 847052
Number of successful extensions: 9697
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 205
Number of HSP's that attempted gapping in prelim test: 8576
Number of HSP's gapped (non-prelim): 1140
length of query: 325
length of database: 18,247,518
effective HSP length: 102
effective length of query: 223
effective length of database: 14,385,186
effective search space: 3207896478
effective search space used: 3207896478
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.