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Search of human proteins with 19923599
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19923599 calmin [Homo sapiens]
(1002 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19923599 calmin [Homo sapiens] 1988 0.0
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 265 1e-70
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 259 7e-69
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof... 224 4e-58
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof... 224 4e-58
gi|112382252 spectrin, beta, non-erythrocytic 1 isoform 2 [Homo ... 180 7e-45
gi|112382250 spectrin, beta, non-erythrocytic 1 isoform 1 [Homo ... 179 9e-45
gi|5902122 spectrin, beta, non-erythrocytic 2 [Homo sapiens] 176 1e-43
gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... 176 1e-43
gi|67782321 spectrin beta isoform a [Homo sapiens] 175 2e-43
gi|67782319 spectrin beta isoform b [Homo sapiens] 175 2e-43
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 170 5e-42
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 170 7e-42
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 168 2e-41
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 168 3e-41
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 168 3e-41
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 168 3e-41
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 168 3e-41
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 168 3e-41
gi|33188445 microfilament and actin filament cross-linker protei... 167 6e-41
gi|34577047 dystonin isoform 1 [Homo sapiens] 166 8e-41
gi|110611228 utrophin [Homo sapiens] 165 2e-40
gi|169218211 PREDICTED: similar to plectin 1, partial [Homo sapi... 165 2e-40
gi|221316624 dystonin isoform 4 [Homo sapiens] 165 2e-40
gi|221316622 dystonin isoform 3 [Homo sapiens] 165 2e-40
gi|221316618 dystonin isoform 2 [Homo sapiens] 165 2e-40
gi|5032281 dystrophin Dp427c isoform [Homo sapiens] 162 2e-39
gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens] 161 3e-39
gi|5032283 dystrophin Dp427m isoform [Homo sapiens] 161 3e-39
gi|12025678 actinin, alpha 4 [Homo sapiens] 150 4e-36
>gi|19923599 calmin [Homo sapiens]
Length = 1002
Score = 1988 bits (5151), Expect = 0.0
Identities = 1002/1002 (100%), Positives = 1002/1002 (100%)
Query: 1 MAAHEWDWFQREELIGQISDIRVQNLQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFV 60
MAAHEWDWFQREELIGQISDIRVQNLQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFV
Sbjct: 1 MAAHEWDWFQREELIGQISDIRVQNLQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFV 60
Query: 61 DIQDGKILMALLEVLSGRNLLHEYKSSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIA 120
DIQDGKILMALLEVLSGRNLLHEYKSSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIA
Sbjct: 61 DIQDGKILMALLEVLSGRNLLHEYKSSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIA 120
Query: 121 DGNPSLVLGLIWNIILFFQIKELTGNLSRNSPSSSLSPGSGGTDSDSSFPPTPTAERSVA 180
DGNPSLVLGLIWNIILFFQIKELTGNLSRNSPSSSLSPGSGGTDSDSSFPPTPTAERSVA
Sbjct: 121 DGNPSLVLGLIWNIILFFQIKELTGNLSRNSPSSSLSPGSGGTDSDSSFPPTPTAERSVA 180
Query: 181 ISVKDQRKAIKALLAWVQRKTRKYGVAVQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALE 240
ISVKDQRKAIKALLAWVQRKTRKYGVAVQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALE
Sbjct: 181 ISVKDQRKAIKALLAWVQRKTRKYGVAVQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALE 240
Query: 241 NSTRENLEKAFSIAQDALHIPRLLEPEDIMVDTPDEQSIMTYVAQFLERFPELEAEDIFD 300
NSTRENLEKAFSIAQDALHIPRLLEPEDIMVDTPDEQSIMTYVAQFLERFPELEAEDIFD
Sbjct: 241 NSTRENLEKAFSIAQDALHIPRLLEPEDIMVDTPDEQSIMTYVAQFLERFPELEAEDIFD 300
Query: 301 SDKEVPIESTFVRIKETPSEQESKVFVLTENGERTYTVNHETSHPPPSKVFVCDKPESMK 360
SDKEVPIESTFVRIKETPSEQESKVFVLTENGERTYTVNHETSHPPPSKVFVCDKPESMK
Sbjct: 301 SDKEVPIESTFVRIKETPSEQESKVFVLTENGERTYTVNHETSHPPPSKVFVCDKPESMK 360
Query: 361 EFRLDGVSSHALSDSSTEFMHQIIDQVLQGGPGKTSDISEPSPESSILSSRKENGRSNSL 420
EFRLDGVSSHALSDSSTEFMHQIIDQVLQGGPGKTSDISEPSPESSILSSRKENGRSNSL
Sbjct: 361 EFRLDGVSSHALSDSSTEFMHQIIDQVLQGGPGKTSDISEPSPESSILSSRKENGRSNSL 420
Query: 421 PIKKTVHFEADTYKDPFCSKNLSLCFEGSPRVAKESLRQDGHVLAVEVAEEKEQKQESSK 480
PIKKTVHFEADTYKDPFCSKNLSLCFEGSPRVAKESLRQDGHVLAVEVAEEKEQKQESSK
Sbjct: 421 PIKKTVHFEADTYKDPFCSKNLSLCFEGSPRVAKESLRQDGHVLAVEVAEEKEQKQESSK 480
Query: 481 IPESSSDKVAGDIFLVEGTNNNSQSSSCNGALESTARHDEESHSLSPPGENTVMADSFQI 540
IPESSSDKVAGDIFLVEGTNNNSQSSSCNGALESTARHDEESHSLSPPGENTVMADSFQI
Sbjct: 481 IPESSSDKVAGDIFLVEGTNNNSQSSSCNGALESTARHDEESHSLSPPGENTVMADSFQI 540
Query: 541 KVNLMTVEALEEGDYFEAIPLKASKFNSDLIDFASTSQAFNKVPSPHETKPDEDAEAFEN 600
KVNLMTVEALEEGDYFEAIPLKASKFNSDLIDFASTSQAFNKVPSPHETKPDEDAEAFEN
Sbjct: 541 KVNLMTVEALEEGDYFEAIPLKASKFNSDLIDFASTSQAFNKVPSPHETKPDEDAEAFEN 600
Query: 601 HAEKLGKRSIKSAHKKKDSPEPQVKMDKHEPHQDSGEEAEGCPSAPEETPVDKKPEVHEK 660
HAEKLGKRSIKSAHKKKDSPEPQVKMDKHEPHQDSGEEAEGCPSAPEETPVDKKPEVHEK
Sbjct: 601 HAEKLGKRSIKSAHKKKDSPEPQVKMDKHEPHQDSGEEAEGCPSAPEETPVDKKPEVHEK 660
Query: 661 AKRKSTRPHYEEEGEDDDLQGVGEELSSSPPSSCVSLETLGSHSEEGLDFKPSPPLSKVS 720
AKRKSTRPHYEEEGEDDDLQGVGEELSSSPPSSCVSLETLGSHSEEGLDFKPSPPLSKVS
Sbjct: 661 AKRKSTRPHYEEEGEDDDLQGVGEELSSSPPSSCVSLETLGSHSEEGLDFKPSPPLSKVS 720
Query: 721 VIPHDLFYFPHYEVPLAAVLEAYVEDPEDLKNEEMDLEEPEGYMPDLDSREEEADGSQSS 780
VIPHDLFYFPHYEVPLAAVLEAYVEDPEDLKNEEMDLEEPEGYMPDLDSREEEADGSQSS
Sbjct: 721 VIPHDLFYFPHYEVPLAAVLEAYVEDPEDLKNEEMDLEEPEGYMPDLDSREEEADGSQSS 780
Query: 781 SSSSVPGESLPSASDQVLYLSRGGVGTTPASEPAPLAPHEDHQQRETKENDPMDSHQSQE 840
SSSSVPGESLPSASDQVLYLSRGGVGTTPASEPAPLAPHEDHQQRETKENDPMDSHQSQE
Sbjct: 781 SSSSVPGESLPSASDQVLYLSRGGVGTTPASEPAPLAPHEDHQQRETKENDPMDSHQSQE 840
Query: 841 SPNLENIANPLEENVTKESISSKKKEKRKHVDHVESSLFVAPGSVQSSDDLEEDSSDYSI 900
SPNLENIANPLEENVTKESISSKKKEKRKHVDHVESSLFVAPGSVQSSDDLEEDSSDYSI
Sbjct: 841 SPNLENIANPLEENVTKESISSKKKEKRKHVDHVESSLFVAPGSVQSSDDLEEDSSDYSI 900
Query: 901 PSRTSHSDSSIYLRRHTHRSSESDHFSYVQLRNAADLDDRRNRILTRKANSSGEAMSLGS 960
PSRTSHSDSSIYLRRHTHRSSESDHFSYVQLRNAADLDDRRNRILTRKANSSGEAMSLGS
Sbjct: 901 PSRTSHSDSSIYLRRHTHRSSESDHFSYVQLRNAADLDDRRNRILTRKANSSGEAMSLGS 960
Query: 961 HSPQSDSLTQLVQQPDMMYFILFLWLLVYCLLLFPQLDVSRL 1002
HSPQSDSLTQLVQQPDMMYFILFLWLLVYCLLLFPQLDVSRL
Sbjct: 961 HSPQSDSLTQLVQQPDMMYFILFLWLLVYCLLLFPQLDVSRL 1002
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform
1 [Homo sapiens]
Length = 8797
Score = 265 bits (678), Expect = 1e-70
Identities = 166/350 (47%), Positives = 218/350 (62%), Gaps = 19/350 (5%)
Query: 23 VQNLQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLLH 82
+Q LQ E+E VQKRTFT+WIN HL K PP+ V DLF D++DG L+ALLEVLSG+ L
Sbjct: 18 MQRLQDEQEIVQKRTFTKWINSHLAKRKPPMVVDDLFEDMKDGVKLLALLEVLSGQKLPC 77
Query: 83 EYKSSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIKE 142
E RI + NI ALKFLE +KLV+I++ +IADG PS+VLGL+W IIL+FQI+E
Sbjct: 78 EQGRRMKRIHAVANIGTALKFLEGRKIKLVNINSTDIADGRPSIVLGLMWTIILYFQIEE 137
Query: 143 LTGNLSRNSPSSSLSPGSGGTDS-DSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKT 201
LT NL + SLS + DS SS P+P ++R V + K Q A KALL WVQ
Sbjct: 138 LTSNLPQ---LQSLSSSASSVDSIVSSETPSPPSKRKV--TTKIQGNAKKALLKWVQYTA 192
Query: 202 RKY-GVAVQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQDALHI 260
K G+ V+DF SWRSG+AF +VI AI P LVD++ S RENLE AF+IA+ L I
Sbjct: 193 GKQTGIEVKDFGKSWRSGVAFHSVIHAIRPELVDLETVKGRSNRENLEDAFTIAETELGI 252
Query: 261 PRLLEPEDIMVDTPDEQSIMTYVAQFLERFPELE--AEDIFDSDKEVPIESTFVRIKETP 318
PRLL+PED+ VD PDE+SIMTYVAQFL+ +P++ + D + D+ +P +F +
Sbjct: 253 PRLLDPEDVDVDKPDEKSIMTYVAQFLKHYPDIHNASTDGQEDDEILPGFPSFANSVQNF 312
Query: 319 SEQESKVF----VLTENGERTYTVNHETSHPPPSKVFVCDKPESMKEFRL 364
++ +F V E ER T + + DK +S K FR+
Sbjct: 313 KREDRVIFKEMKVWIEQFERDLT------RAQMVESNLQDKYQSFKHFRV 356
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform
2 [Homo sapiens]
Length = 8749
Score = 259 bits (663), Expect = 7e-69
Identities = 167/357 (46%), Positives = 219/357 (61%), Gaps = 26/357 (7%)
Query: 23 VQNLQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLLH 82
+Q LQ E+E VQKRTFT+WIN HL K PP+ V DLF D++DG L+ALLEVLSG+ L
Sbjct: 18 MQRLQDEQEIVQKRTFTKWINSHLAKRKPPMVVDDLFEDMKDGVKLLALLEVLSGQKLPC 77
Query: 83 EYKSSSHRIFRLNNIAKALKFLED-------SNVKLVSIDAAEIADGNPSLVLGLIWNII 135
E RI + NI ALKFLE S +KLV+I++ +IADG PS+VLGL+W II
Sbjct: 78 EQGRRMKRIHAVANIGTALKFLEGRKSMHRGSPIKLVNINSTDIADGRPSIVLGLMWTII 137
Query: 136 LFFQIKELTGNLSRNSPSSSLSPGSGGTDSD-SSFPPTPTAERSVAISVKDQRKAIKALL 194
L+FQI+ELT NL + SLS + DS SS P+P ++R V + K Q A KALL
Sbjct: 138 LYFQIEELTSNLPQ---LQSLSSSASSVDSIVSSETPSPPSKRKV--TTKIQGNAKKALL 192
Query: 195 AWVQRKTRKY-GVAVQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSI 253
WVQ K G+ V+DF SWRSG+AF +VI AI P LVD++ S RENLE AF+I
Sbjct: 193 KWVQYTAGKQTGIEVKDFGKSWRSGVAFHSVIHAIRPELVDLETVKGRSNRENLEDAFTI 252
Query: 254 AQDALHIPRLLEPEDIMVDTPDEQSIMTYVAQFLERFPELE--AEDIFDSDKEVPIESTF 311
A+ L IPRLL+PED+ VD PDE+SIMTYVAQFL+ +P++ + D + D+ +P +F
Sbjct: 253 AETELGIPRLLDPEDVDVDKPDEKSIMTYVAQFLKHYPDIHNASTDGQEDDEILPGFPSF 312
Query: 312 VRIKETPSEQESKVF----VLTENGERTYTVNHETSHPPPSKVFVCDKPESMKEFRL 364
+ ++ +F V E ER T + + DK +S K FR+
Sbjct: 313 ANSVQNFKREDRVIFKEMKVWIEQFERDLT------RAQMVESNLQDKYQSFKHFRV 363
>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform
5 [Homo sapiens]
Length = 6907
Score = 224 bits (570), Expect = 4e-58
Identities = 128/272 (47%), Positives = 173/272 (63%), Gaps = 7/272 (2%)
Query: 18 ISDIRVQNLQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSG 77
I D+ + +LQ E+E+ QK+ FT WIN L + P + DLF DI+ G +L+ LLEVLSG
Sbjct: 18 IDDLHI-SLQAEQEDTQKKAFTCWINSQLARHTSPSVISDLFTDIKKGHVLLDLLEVLSG 76
Query: 78 RNLLHEYKSSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILF 137
+ L + S++ + R+N I AL FL + ++KL++I +I DGNPS++LGLIW IIL
Sbjct: 77 QQLPRDKGSNTFQC-RIN-IEHALTFLRNRSIKLINIHVTDIIDGNPSIILGLIWTIILH 134
Query: 138 FQIKELTGNLSRNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWV 197
F I++L LS N SL S S +S PP A++ + + Q A KALL W
Sbjct: 135 FHIEKLAQTLSCNYNQPSLDDVSVVDSSPASSPP---AKKCSKVQARWQMSARKALLLWA 191
Query: 198 QRKTRKY-GVAVQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQD 256
Q + Y V V DF SWR+G+AFLA+I A+ P L+DMK S ++NL +AF IA+
Sbjct: 192 QEQCATYESVNVTDFKSSWRNGMAFLAIIHALRPDLIDMKSVKHRSNKDNLREAFRIAEQ 251
Query: 257 ALHIPRLLEPEDIMVDTPDEQSIMTYVAQFLE 288
L IPRLLEPED+ V PDE+SIMTYVAQFL+
Sbjct: 252 ELKIPRLLEPEDVDVVDPDEKSIMTYVAQFLQ 283
>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform
1 [Homo sapiens]
Length = 6885
Score = 224 bits (570), Expect = 4e-58
Identities = 128/272 (47%), Positives = 173/272 (63%), Gaps = 7/272 (2%)
Query: 18 ISDIRVQNLQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSG 77
I D+ + +LQ E+E+ QK+ FT WIN L + P + DLF DI+ G +L+ LLEVLSG
Sbjct: 18 IDDLHI-SLQAEQEDTQKKAFTCWINSQLARHTSPSVISDLFTDIKKGHVLLDLLEVLSG 76
Query: 78 RNLLHEYKSSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILF 137
+ L + S++ + R+N I AL FL + ++KL++I +I DGNPS++LGLIW IIL
Sbjct: 77 QQLPRDKGSNTFQC-RIN-IEHALTFLRNRSIKLINIHVTDIIDGNPSIILGLIWTIILH 134
Query: 138 FQIKELTGNLSRNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWV 197
F I++L LS N SL S S +S PP A++ + + Q A KALL W
Sbjct: 135 FHIEKLAQTLSCNYNQPSLDDVSVVDSSPASSPP---AKKCSKVQARWQMSARKALLLWA 191
Query: 198 QRKTRKY-GVAVQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQD 256
Q + Y V V DF SWR+G+AFLA+I A+ P L+DMK S ++NL +AF IA+
Sbjct: 192 QEQCATYESVNVTDFKSSWRNGMAFLAIIHALRPDLIDMKSVKHRSNKDNLREAFRIAEQ 251
Query: 257 ALHIPRLLEPEDIMVDTPDEQSIMTYVAQFLE 288
L IPRLLEPED+ V PDE+SIMTYVAQFL+
Sbjct: 252 ELKIPRLLEPEDVDVVDPDEKSIMTYVAQFLQ 283
>gi|112382252 spectrin, beta, non-erythrocytic 1 isoform 2 [Homo
sapiens]
Length = 2155
Score = 180 bits (456), Expect = 7e-45
Identities = 106/275 (38%), Positives = 156/275 (56%), Gaps = 37/275 (13%)
Query: 22 RVQNLQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLL 81
R + LQ ERE VQK+TFT+W+N HL + + + DL+ D++DG++L+ LLEVLSG L
Sbjct: 31 RFKQLQDEREAVQKKTFTKWVNSHLARVS--CRITDLYTDLRDGRMLIKLLEVLSGERLP 88
Query: 82 HEYKSSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIK 141
K RI L N+ KAL+FL++ V L ++ + +I DGN L LGLIW IIL FQI+
Sbjct: 89 KPTKGRM-RIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQ 147
Query: 142 ELTGNLSRNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKT 201
+++ N K+++ A ALL W Q KT
Sbjct: 148 DISVETEDN---------------------------------KEKKSAKDALLLWCQMKT 174
Query: 202 RKY-GVAVQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQDALHI 260
Y V + +F SWR G+AF A+I P L+D + +++ NL+ AF++A+ L +
Sbjct: 175 AGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGL 234
Query: 261 PRLLEPEDIMVDTPDEQSIMTYVAQFLERFPELEA 295
+LL+PEDI VD PDE+SI+TYV + F +++A
Sbjct: 235 TKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKA 269
>gi|112382250 spectrin, beta, non-erythrocytic 1 isoform 1 [Homo
sapiens]
Length = 2364
Score = 179 bits (455), Expect = 9e-45
Identities = 107/290 (36%), Positives = 158/290 (54%), Gaps = 37/290 (12%)
Query: 7 DWFQREELIGQISDIRVQNLQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGK 66
DW R++ L ERE VQK+TFT+W+N HL + + + DL+ D++DG+
Sbjct: 29 DWDNENSSARLFERSRIKALADEREAVQKKTFTKWVNSHLARVS--CRITDLYTDLRDGR 86
Query: 67 ILMALLEVLSGRNLLHEYKSSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSL 126
+L+ LLEVLSG L K RI L N+ KAL+FL++ V L ++ + +I DGN L
Sbjct: 87 MLIKLLEVLSGERLPKPTKGRM-RIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRL 145
Query: 127 VLGLIWNIILFFQIKELTGNLSRNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQ 186
LGLIW IIL FQI++++ N K++
Sbjct: 146 TLGLIWTIILRFQIQDISVETEDN---------------------------------KEK 172
Query: 187 RKAIKALLAWVQRKTRKY-GVAVQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRE 245
+ A ALL W Q KT Y V + +F SWR G+AF A+I P L+D + +++
Sbjct: 173 KSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHY 232
Query: 246 NLEKAFSIAQDALHIPRLLEPEDIMVDTPDEQSIMTYVAQFLERFPELEA 295
NL+ AF++A+ L + +LL+PEDI VD PDE+SI+TYV + F +++A
Sbjct: 233 NLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKA 282
Score = 30.4 bits (67), Expect = 8.7
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 14/90 (15%)
Query: 401 PSPESSILSSRKENGRSNSLPIKKTVHFEADTYKDPFCSKNLSLCFEGSPRVAKESLRQD 460
PSPE S S + + + DT K S+N +GSPR+A+ D
Sbjct: 2101 PSPEPSTKVSEEAESQQ-----------QWDTSKGEQVSQNGLPAEQGSPRMAETV---D 2146
Query: 461 GHVLAVEVAEEKEQKQESSKIPESSSDKVA 490
+ E++ +ESS IP +SD+ A
Sbjct: 2147 TSEMVNGATEQRTSSKESSPIPSPTSDRKA 2176
>gi|5902122 spectrin, beta, non-erythrocytic 2 [Homo sapiens]
Length = 2390
Score = 176 bits (446), Expect = 1e-43
Identities = 107/290 (36%), Positives = 157/290 (54%), Gaps = 37/290 (12%)
Query: 7 DWFQREELIGQISDIRVQNLQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGK 66
DW R++ L ERE VQK+TFT+W+N HL + V DL+ D++DG+
Sbjct: 32 DWDNDSSSARLFERSRIKALADEREAVQKKTFTKWVNSHLARVT--CRVGDLYSDLRDGR 89
Query: 67 ILMALLEVLSGRNLLHEYKSSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSL 126
L+ LLEVLSG +L + RI L N+ KAL+FL++ V L ++ + +I DGN L
Sbjct: 90 NLLRLLEVLSGE-ILPKPTKGRMRIHCLENVDKALQFLKEQKVHLENMGSHDIVDGNHRL 148
Query: 127 VLGLIWNIILFFQIKELTGNLSRNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQ 186
LGL+W IIL FQI++++ N K++
Sbjct: 149 TLGLVWTIILRFQIQDISVETEDN---------------------------------KEK 175
Query: 187 RKAIKALLAWVQRKTRKY-GVAVQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRE 245
+ A ALL W Q KT Y V V +F SWR GLAF A++ P L+D + + +
Sbjct: 176 KSAKDALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKKCNAHY 235
Query: 246 NLEKAFSIAQDALHIPRLLEPEDIMVDTPDEQSIMTYVAQFLERFPELEA 295
NL+ AF++A+ L + +LL+PED+ VD PDE+SI+TYVA + F +++A
Sbjct: 236 NLQNAFNLAEKELGLTKLLDPEDVNVDQPDEKSIITYVATYYHYFSKMKA 285
>gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1
[Homo sapiens]
Length = 2564
Score = 176 bits (446), Expect = 1e-43
Identities = 106/275 (38%), Positives = 151/275 (54%), Gaps = 37/275 (13%)
Query: 22 RVQNLQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLL 81
R++ L ERE VQK+TFT+W+N HL + + DL+VD++DG +L LLEVLSG L
Sbjct: 51 RIKALADEREAVQKKTFTKWVNSHLARVG--CHIGDLYVDLRDGFVLTRLLEVLSGEQLP 108
Query: 82 HEYKSSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIK 141
+ RI L N+ KAL+FL++ V L ++ + +I DGN L LGL+W IIL FQI+
Sbjct: 109 RPTRGRM-RIHSLENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQ 167
Query: 142 ELTGNLSRNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKT 201
+ N ++ R A ALL W Q KT
Sbjct: 168 VIKIETEDN---------------------------------RETRSAKDALLLWCQMKT 194
Query: 202 RKY-GVAVQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQDALHI 260
Y V +Q+F SWR GLAF A+I P LVD + +++ NL++AF A+ L +
Sbjct: 195 AGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFSKLTKSNANYNLQRAFRTAEQHLGL 254
Query: 261 PRLLEPEDIMVDTPDEQSIMTYVAQFLERFPELEA 295
RLL+PED+ ++ PDE+SI+TYV F F +++A
Sbjct: 255 ARLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKA 289
>gi|67782321 spectrin beta isoform a [Homo sapiens]
Length = 2328
Score = 175 bits (443), Expect = 2e-43
Identities = 106/274 (38%), Positives = 152/274 (55%), Gaps = 37/274 (13%)
Query: 22 RVQNLQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLL 81
R++ L ERE VQK+TFT+W+N HL + + + DL+ D++DG++L+ LLEVLSG L
Sbjct: 44 RIKALADEREVVQKKTFTKWVNSHLARVS--CRITDLYKDLRDGRMLIKLLEVLSGEMLP 101
Query: 82 HEYKSSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIK 141
K RI L N+ KAL+FL++ V L ++ + +I DGN LVLGLIW IIL FQI+
Sbjct: 102 KPTKGKM-RIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQ 160
Query: 142 ELTGNLSRNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKT 201
++ ++ R A ALL W Q KT
Sbjct: 161 DIVVQTQEG---------------------------------RETRSAKDALLLWCQMKT 187
Query: 202 RKY-GVAVQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQDALHI 260
Y V V +F SW+ GLAF A+I P L+D + +++ R NLE AF++A+ L I
Sbjct: 188 AGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHNLEHAFNVAERQLGI 247
Query: 261 PRLLEPEDIMVDTPDEQSIMTYVAQFLERFPELE 294
LL+PED+ + PDE+SI+TYV F F +++
Sbjct: 248 IPLLDPEDVFTENPDEKSIITYVVAFYHYFSKMK 281
>gi|67782319 spectrin beta isoform b [Homo sapiens]
Length = 2137
Score = 175 bits (443), Expect = 2e-43
Identities = 106/274 (38%), Positives = 152/274 (55%), Gaps = 37/274 (13%)
Query: 22 RVQNLQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLL 81
R++ L ERE VQK+TFT+W+N HL + + + DL+ D++DG++L+ LLEVLSG L
Sbjct: 44 RIKALADEREVVQKKTFTKWVNSHLARVS--CRITDLYKDLRDGRMLIKLLEVLSGEMLP 101
Query: 82 HEYKSSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIK 141
K RI L N+ KAL+FL++ V L ++ + +I DGN LVLGLIW IIL FQI+
Sbjct: 102 KPTKGKM-RIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQ 160
Query: 142 ELTGNLSRNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKT 201
++ ++ R A ALL W Q KT
Sbjct: 161 DIVVQTQEG---------------------------------RETRSAKDALLLWCQMKT 187
Query: 202 RKY-GVAVQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQDALHI 260
Y V V +F SW+ GLAF A+I P L+D + +++ R NLE AF++A+ L I
Sbjct: 188 AGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKLKDSNARHNLEHAFNVAERQLGI 247
Query: 261 PRLLEPEDIMVDTPDEQSIMTYVAQFLERFPELE 294
LL+PED+ + PDE+SI+TYV F F +++
Sbjct: 248 IPLLDPEDVFTENPDEKSIITYVVAFYHYFSKMK 281
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 170 bits (431), Expect = 5e-42
Identities = 104/272 (38%), Positives = 145/272 (53%), Gaps = 40/272 (14%)
Query: 23 VQNLQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLLH 82
+ +L+ ER+ VQK+TFT+W+N HL K + DL+ D++DG L++LLEVLSG +L
Sbjct: 11 ISSLKDERDRVQKKTFTKWVNKHLIKAQR--HISDLYEDLRDGHNLISLLEVLSGDSLPR 68
Query: 83 EYKSSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIKE 142
E R +L N+ AL +L VKLV+I +IADGNP L LGLIW IIL FQI +
Sbjct: 69 E--KGRMRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISD 126
Query: 143 LTGNLSRNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKTR 202
+ G D + A + LL W QR
Sbjct: 127 IQ---------------VSGQSEDMT--------------------AKEKLLLWSQRMVE 151
Query: 203 KY-GVAVQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQDALHIP 261
Y G+ +F SWR G F A+I P L+DM + + ENL++AFS+A+ L +
Sbjct: 152 GYQGLRCDNFTSSWRDGRLFNAIIHRHKPLLIDMNKVYRQTNLENLDQAFSVAERDLGVT 211
Query: 262 RLLEPEDIMVDTPDEQSIMTYVAQFLERFPEL 293
RLL+PED+ V PDE+SI+TYV+ + P +
Sbjct: 212 RLLDPEDVDVPQPDEKSIITYVSSLYDAMPRV 243
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 170 bits (430), Expect = 7e-42
Identities = 105/271 (38%), Positives = 144/271 (53%), Gaps = 40/271 (14%)
Query: 24 QNLQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLLHE 83
Q+ Q ER+ VQK+TFT+W+N HL K + DL+ D++DG L++LLEVLSG +L E
Sbjct: 34 QDEQDERDRVQKKTFTKWVNKHLIKAQR--HISDLYEDLRDGHNLISLLEVLSGDSLPRE 91
Query: 84 YKSSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIKEL 143
R +L N+ AL +L VKLV+I +IADGNP L LGLIW IIL FQI ++
Sbjct: 92 --KGRMRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISDI 149
Query: 144 TGNLSRNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKTRK 203
G D + A + LL W QR
Sbjct: 150 Q---------------VSGQSEDMT--------------------AKEKLLLWSQRMVEG 174
Query: 204 Y-GVAVQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQDALHIPR 262
Y G+ +F SWR G F A+I P L+DM + + ENL++AFS+A+ L + R
Sbjct: 175 YQGLRCDNFTSSWRDGRLFNAIIHRHKPLLIDMNKVYRQTNLENLDQAFSVAERDLGVTR 234
Query: 263 LLEPEDIMVDTPDEQSIMTYVAQFLERFPEL 293
LL+PED+ V PDE+SI+TYV+ + P +
Sbjct: 235 LLDPEDVDVPQPDEKSIITYVSSLYDAMPRV 265
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 168 bits (426), Expect = 2e-41
Identities = 105/283 (37%), Positives = 149/283 (52%), Gaps = 41/283 (14%)
Query: 12 EELIGQISDIRVQNLQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMAL 71
++ I ++R + + ER+ VQK+TFT+W+N HL K + DL+ D++DG L++L
Sbjct: 9 QDFIQAYEEVR-EKYKDERDRVQKKTFTKWVNKHLIKAQR--HISDLYEDLRDGHNLISL 65
Query: 72 LEVLSGRNLLHEYKSSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLI 131
LEVLSG +L E R +L N+ AL +L VKLV+I +IADGNP L LGLI
Sbjct: 66 LEVLSGDSLPRE--KGRMRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLI 123
Query: 132 WNIILFFQIKELTGNLSRNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIK 191
W IIL FQI ++ G D + A +
Sbjct: 124 WTIILHFQISDIQ---------------VSGQSEDMT--------------------AKE 148
Query: 192 ALLAWVQRKTRKY-GVAVQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKA 250
LL W QR Y G+ +F SWR G F A+I P L+DM + + ENL++A
Sbjct: 149 KLLLWSQRMVEGYQGLRCDNFTSSWRDGRLFNAIIHRHKPLLIDMNKVYRQTNLENLDQA 208
Query: 251 FSIAQDALHIPRLLEPEDIMVDTPDEQSIMTYVAQFLERFPEL 293
FS+A+ L + RLL+PED+ V PDE+SI+TYV+ + P +
Sbjct: 209 FSVAERDLGVTRLLDPEDVDVPQPDEKSIITYVSSLYDAMPRV 251
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 168 bits (425), Expect = 3e-41
Identities = 103/266 (38%), Positives = 141/266 (53%), Gaps = 40/266 (15%)
Query: 29 ERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLLHEYKSSS 88
ER+ VQK+TFT+W+N HL K + DL+ D++DG L++LLEVLSG +L E
Sbjct: 39 ERDRVQKKTFTKWVNKHLIKAQR--HISDLYEDLRDGHNLISLLEVLSGDSLPRE--KGR 94
Query: 89 HRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIKELTGNLS 148
R +L N+ AL +L VKLV+I +IADGNP L LGLIW IIL FQI ++
Sbjct: 95 MRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISDIQ---- 150
Query: 149 RNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKTRKY-GVA 207
G D + A + LL W QR Y G+
Sbjct: 151 -----------VSGQSEDMT--------------------AKEKLLLWSQRMVEGYQGLR 179
Query: 208 VQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQDALHIPRLLEPE 267
+F SWR G F A+I P L+DM + + ENL++AFS+A+ L + RLL+PE
Sbjct: 180 CDNFTSSWRDGRLFNAIIHRHKPLLIDMNKVYRQTNLENLDQAFSVAERDLGVTRLLDPE 239
Query: 268 DIMVDTPDEQSIMTYVAQFLERFPEL 293
D+ V PDE+SI+TYV+ + P +
Sbjct: 240 DVDVPQPDEKSIITYVSSLYDAMPRV 265
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 168 bits (425), Expect = 3e-41
Identities = 103/266 (38%), Positives = 141/266 (53%), Gaps = 40/266 (15%)
Query: 29 ERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLLHEYKSSS 88
ER+ VQK+TFT+W+N HL K + DL+ D++DG L++LLEVLSG +L E
Sbjct: 43 ERDRVQKKTFTKWVNKHLIKAQR--HISDLYEDLRDGHNLISLLEVLSGDSLPRE--KGR 98
Query: 89 HRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIKELTGNLS 148
R +L N+ AL +L VKLV+I +IADGNP L LGLIW IIL FQI ++
Sbjct: 99 MRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISDIQ---- 154
Query: 149 RNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKTRKY-GVA 207
G D + A + LL W QR Y G+
Sbjct: 155 -----------VSGQSEDMT--------------------AKEKLLLWSQRMVEGYQGLR 183
Query: 208 VQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQDALHIPRLLEPE 267
+F SWR G F A+I P L+DM + + ENL++AFS+A+ L + RLL+PE
Sbjct: 184 CDNFTSSWRDGRLFNAIIHRHKPLLIDMNKVYRQTNLENLDQAFSVAERDLGVTRLLDPE 243
Query: 268 DIMVDTPDEQSIMTYVAQFLERFPEL 293
D+ V PDE+SI+TYV+ + P +
Sbjct: 244 DVDVPQPDEKSIITYVSSLYDAMPRV 269
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 168 bits (425), Expect = 3e-41
Identities = 103/266 (38%), Positives = 141/266 (53%), Gaps = 40/266 (15%)
Query: 29 ERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLLHEYKSSS 88
ER+ VQK+TFT+W+N HL K + DL+ D++DG L++LLEVLSG +L E
Sbjct: 7 ERDRVQKKTFTKWVNKHLIKAQR--HISDLYEDLRDGHNLISLLEVLSGDSLPRE--KGR 62
Query: 89 HRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIKELTGNLS 148
R +L N+ AL +L VKLV+I +IADGNP L LGLIW IIL FQI ++
Sbjct: 63 MRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISDIQ---- 118
Query: 149 RNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKTRKY-GVA 207
G D + A + LL W QR Y G+
Sbjct: 119 -----------VSGQSEDMT--------------------AKEKLLLWSQRMVEGYQGLR 147
Query: 208 VQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQDALHIPRLLEPE 267
+F SWR G F A+I P L+DM + + ENL++AFS+A+ L + RLL+PE
Sbjct: 148 CDNFTSSWRDGRLFNAIIHRHKPLLIDMNKVYRQTNLENLDQAFSVAERDLGVTRLLDPE 207
Query: 268 DIMVDTPDEQSIMTYVAQFLERFPEL 293
D+ V PDE+SI+TYV+ + P +
Sbjct: 208 DVDVPQPDEKSIITYVSSLYDAMPRV 233
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 168 bits (425), Expect = 3e-41
Identities = 103/266 (38%), Positives = 141/266 (53%), Gaps = 40/266 (15%)
Query: 29 ERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLLHEYKSSS 88
ER+ VQK+TFT+W+N HL K + DL+ D++DG L++LLEVLSG +L E
Sbjct: 176 ERDRVQKKTFTKWVNKHLIKAQR--HISDLYEDLRDGHNLISLLEVLSGDSLPRE--KGR 231
Query: 89 HRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIKELTGNLS 148
R +L N+ AL +L VKLV+I +IADGNP L LGLIW IIL FQI ++
Sbjct: 232 MRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISDIQ---- 287
Query: 149 RNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKTRKY-GVA 207
G D + A + LL W QR Y G+
Sbjct: 288 -----------VSGQSEDMT--------------------AKEKLLLWSQRMVEGYQGLR 316
Query: 208 VQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQDALHIPRLLEPE 267
+F SWR G F A+I P L+DM + + ENL++AFS+A+ L + RLL+PE
Sbjct: 317 CDNFTSSWRDGRLFNAIIHRHKPLLIDMNKVYRQTNLENLDQAFSVAERDLGVTRLLDPE 376
Query: 268 DIMVDTPDEQSIMTYVAQFLERFPEL 293
D+ V PDE+SI+TYV+ + P +
Sbjct: 377 DVDVPQPDEKSIITYVSSLYDAMPRV 402
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 168 bits (425), Expect = 3e-41
Identities = 103/266 (38%), Positives = 141/266 (53%), Gaps = 40/266 (15%)
Query: 29 ERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLLHEYKSSS 88
ER+ VQK+TFT+W+N HL K + DL+ D++DG L++LLEVLSG +L E
Sbjct: 66 ERDRVQKKTFTKWVNKHLIKAQR--HISDLYEDLRDGHNLISLLEVLSGDSLPRE--KGR 121
Query: 89 HRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIKELTGNLS 148
R +L N+ AL +L VKLV+I +IADGNP L LGLIW IIL FQI ++
Sbjct: 122 MRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISDIQ---- 177
Query: 149 RNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKTRKY-GVA 207
G D + A + LL W QR Y G+
Sbjct: 178 -----------VSGQSEDMT--------------------AKEKLLLWSQRMVEGYQGLR 206
Query: 208 VQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQDALHIPRLLEPE 267
+F SWR G F A+I P L+DM + + ENL++AFS+A+ L + RLL+PE
Sbjct: 207 CDNFTSSWRDGRLFNAIIHRHKPLLIDMNKVYRQTNLENLDQAFSVAERDLGVTRLLDPE 266
Query: 268 DIMVDTPDEQSIMTYVAQFLERFPEL 293
D+ V PDE+SI+TYV+ + P +
Sbjct: 267 DVDVPQPDEKSIITYVSSLYDAMPRV 292
Score = 32.7 bits (73), Expect = 1.8
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 21/126 (16%)
Query: 105 EDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIKELTGNLSRNSPSSSLSPGSGGTD 164
ED+ V+ VS D + + G+PS L WN+ G R+ S G G
Sbjct: 4 EDAEVRAVSEDVSNGSSGSPSPGDTLPWNL----------GKTQRSRRS-----GGGAGS 48
Query: 165 SDSSFPPTPTAERSVAISVKDQRKAI--KALLAWVQRKTRKYGVAVQDFAGSWRSGLAFL 222
+ S P AER+V I + D+R + K WV + K + D R G +
Sbjct: 49 NGSVLDP---AERAV-IRIADERDRVQKKTFTKWVNKHLIKAQRHISDLYEDLRDGHNLI 104
Query: 223 AVIKAI 228
++++ +
Sbjct: 105 SLLEVL 110
>gi|33188445 microfilament and actin filament cross-linker protein
isoform a [Homo sapiens]
Length = 5430
Score = 167 bits (422), Expect = 6e-41
Identities = 105/266 (39%), Positives = 143/266 (53%), Gaps = 41/266 (15%)
Query: 29 ERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLLHEYKSSS 88
ER+ VQK+TFT+W+N HL K + DL+ D++DG L++LLEVLSG L E
Sbjct: 75 ERDRVQKKTFTKWVNKHLMKVRK--HINDLYEDLRDGHNLISLLEVLSGIKLPRE--KGR 130
Query: 89 HRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIKELTGNLS 148
R RL N+ AL FL+ VKLV+I +I DGNP L LGLIW IIL FQI ++
Sbjct: 131 MRFHRLQNVQIALDFLKQRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQISDIY---- 186
Query: 149 RNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKTRKY-GVA 207
G D S A + LL W Q+ T Y G+
Sbjct: 187 -----------ISGESGDMS--------------------AKEKLLLWTQKVTAGYTGIK 215
Query: 208 VQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQDALHIPRLLEPE 267
+F+ W G F A+I P LVDM++ S RENLE+AF +A + L + RLL+ E
Sbjct: 216 CTNFSSCWSDGKMFNALIHRYRPDLVDMERVQIQSNRENLEQAFEVA-ERLGVTRLLDAE 274
Query: 268 DIMVDTPDEQSIMTYVAQFLERFPEL 293
D+ V +PDE+S++TYV+ + FP++
Sbjct: 275 DVDVPSPDEKSVITYVSSIYDAFPKV 300
>gi|34577047 dystonin isoform 1 [Homo sapiens]
Length = 5497
Score = 166 bits (421), Expect = 8e-41
Identities = 111/301 (36%), Positives = 156/301 (51%), Gaps = 44/301 (14%)
Query: 8 WFQREELIGQISDIRVQNLQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKI 67
+ + +E + D+ ++ + ER+ VQK+TFT+WIN HL K V DL+ D++DG
Sbjct: 12 YVEEQEYLQAYEDV-LERYKDERDKVQKKTFTKWINQHLMKVRK--HVNDLYEDLRDGHN 68
Query: 68 LMALLEVLSGRNLLHEYKSSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLV 127
L++LLEVLSG L E R RL N+ AL +L+ VKLV+I +I DGNP L
Sbjct: 69 LISLLEVLSGDTLPRE--KGRMRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLT 126
Query: 128 LGLIWNIILFFQIKELTGNLSRNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQR 187
LGLIW IIL FQI ++ G D S
Sbjct: 127 LGLIWTIILHFQISDIHVT---------------GESEDMS------------------- 152
Query: 188 KAIKALLAWVQRKTRKY-GVAVQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTREN 246
A + LL W Q+ T Y G+ ++F WR G F A+I P L+DM S N
Sbjct: 153 -AKERLLLWTQQATEGYAGIRCENFTTCWRDGKLFNAIIHKYRPDLIDMNTVAVQSNLAN 211
Query: 247 LEKAFSIAQDALHIPRLLEPEDIMVDTPDEQSIMTYVAQFLERFPELE--AEDIFDSDKE 304
LE AF +A + + + RLL+PED+ V +PDE+S++TYV+ + FP++ E I +D E
Sbjct: 212 LEHAFYVA-EKIGVIRLLDPEDVDVSSPDEKSVITYVSSLYDAFPKVPEGGEGIGANDVE 270
Query: 305 V 305
V
Sbjct: 271 V 271
>gi|110611228 utrophin [Homo sapiens]
Length = 3433
Score = 165 bits (418), Expect = 2e-40
Identities = 108/313 (34%), Positives = 163/313 (52%), Gaps = 44/313 (14%)
Query: 17 QISDIRVQNLQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLS 76
+ SDI +++ E +VQK+TFT+WIN K P + D+F D++DG+ L+ LLE L+
Sbjct: 17 EFSDI-IKSRSDEHNDVQKKTFTKWINARFSKSGKP-PINDMFTDLKDGRKLLDLLEGLT 74
Query: 77 GRNLLHEYKSSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIIL 136
G +L E S+ R+ LNN+ + L+ L +NV+LV+I +I DGN L LGL+W+IIL
Sbjct: 75 GTSLPKERGST--RVHALNNVNRVLQVLHQNNVELVNIGGTDIVDGNHKLTLGLLWSIIL 132
Query: 137 FFQIKELTGNLSRNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAW 196
+Q+K++ ++ +S Q + K LL+W
Sbjct: 133 HWQVKDVMKDV---------------------------------MSDLQQTNSEKILLSW 159
Query: 197 VQRKTRKYG-VAVQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQ 255
V++ TR Y V V +F SW GLAF AV+ P L + ++ S E LE AFS AQ
Sbjct: 160 VRQTTRPYSQVNVLNFTTSWTDGLAFNAVLHRHKPDLFSWDKVVKMSPIERLEHAFSKAQ 219
Query: 256 DALHIPRLLEPEDIMVDTPDEQSIMTYVAQFLERFPELEAEDIFDSDKEVP------IES 309
L I +LL+PED+ V PD++SI+ Y+ E P+ D + +P E
Sbjct: 220 TYLGIEKLLDPEDVAVQLPDKKSIIMYLTSLFEVLPQQVTIDAIREVETLPRKYKKECEE 279
Query: 310 TFVRIKETPSEQE 322
+ I+ T E+E
Sbjct: 280 EAINIQSTAPEEE 292
>gi|169218211 PREDICTED: similar to plectin 1, partial [Homo
sapiens]
Length = 1369
Score = 165 bits (417), Expect = 2e-40
Identities = 102/266 (38%), Positives = 140/266 (52%), Gaps = 40/266 (15%)
Query: 29 ERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLLHEYKSSS 88
ER+ VQK+T T+W+N HL K + DL+ D++DG L++LLEVLSG +L E
Sbjct: 172 ERDRVQKKTSTKWVNKHLIKAQR--HISDLYEDLRDGHNLISLLEVLSGDSLPRE--KGR 227
Query: 89 HRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIKELTGNLS 148
R +L N+ AL +L VKLV+I +IADGNP L LGLIW IIL FQI ++
Sbjct: 228 MRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISDIQ---- 283
Query: 149 RNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKTRKY-GVA 207
G D + A + LL W QR Y G+
Sbjct: 284 -----------VSGQSEDMT--------------------AKEKLLLWSQRMVEGYQGLR 312
Query: 208 VQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQDALHIPRLLEPE 267
+F SWR G F A+I P L+DM + + ENL++AFS+A+ L + RLL+PE
Sbjct: 313 CDNFTSSWRDGRLFNAIIHRHKPLLIDMNKVYRQTNLENLDQAFSVAERDLGVTRLLDPE 372
Query: 268 DIMVDTPDEQSIMTYVAQFLERFPEL 293
D+ V PDE+SI+TYV+ + P +
Sbjct: 373 DVDVPQPDEKSIITYVSSLYDAMPRV 398
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 165 bits (417), Expect = 2e-40
Identities = 109/280 (38%), Positives = 146/280 (52%), Gaps = 43/280 (15%)
Query: 29 ERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLLHEYKSSS 88
ER+ VQK+TFT+WIN HL K V DL+ D++DG L++LLEVLSG L E
Sbjct: 61 ERDKVQKKTFTKWINQHLMKVRK--HVNDLYEDLRDGHNLISLLEVLSGDTLPRE--KGR 116
Query: 89 HRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIKELTGNLS 148
R RL N+ AL +L+ VKLV+I +I DGNP L LGLIW IIL FQI ++
Sbjct: 117 MRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQISDIHVT-- 174
Query: 149 RNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKTRKY-GVA 207
G D S A + LL W Q+ T Y G+
Sbjct: 175 -------------GESEDMS--------------------AKERLLLWTQQATEGYAGIR 201
Query: 208 VQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQDALHIPRLLEPE 267
++F WR G F A+I P L+DM S NLE AF +A + + + RLL+PE
Sbjct: 202 CENFTTCWRDGKLFNAIIHKYRPDLIDMNTVAVQSNLANLEHAFYVA-EKIGVIRLLDPE 260
Query: 268 DIMVDTPDEQSIMTYVAQFLERFPELE--AEDIFDSDKEV 305
D+ V +PDE+S++TYV+ + FP++ E I +D EV
Sbjct: 261 DVDVSSPDEKSVITYVSSLYDAFPKVPEGGEGIGANDVEV 300
>gi|221316622 dystonin isoform 3 [Homo sapiens]
Length = 5537
Score = 165 bits (417), Expect = 2e-40
Identities = 109/280 (38%), Positives = 146/280 (52%), Gaps = 43/280 (15%)
Query: 29 ERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLLHEYKSSS 88
ER+ VQK+TFT+WIN HL K V DL+ D++DG L++LLEVLSG L E
Sbjct: 72 ERDKVQKKTFTKWINQHLMKVRK--HVNDLYEDLRDGHNLISLLEVLSGDTLPRE--KGR 127
Query: 89 HRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIKELTGNLS 148
R RL N+ AL +L+ VKLV+I +I DGNP L LGLIW IIL FQI ++
Sbjct: 128 MRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQISDIHVT-- 185
Query: 149 RNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKTRKY-GVA 207
G D S A + LL W Q+ T Y G+
Sbjct: 186 -------------GESEDMS--------------------AKERLLLWTQQATEGYAGIR 212
Query: 208 VQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQDALHIPRLLEPE 267
++F WR G F A+I P L+DM S NLE AF +A + + + RLL+PE
Sbjct: 213 CENFTTCWRDGKLFNAIIHKYRPDLIDMNTVAVQSNLANLEHAFYVA-EKIGVIRLLDPE 271
Query: 268 DIMVDTPDEQSIMTYVAQFLERFPELE--AEDIFDSDKEV 305
D+ V +PDE+S++TYV+ + FP++ E I +D EV
Sbjct: 272 DVDVSSPDEKSVITYVSSLYDAFPKVPEGGEGIGANDVEV 311
>gi|221316618 dystonin isoform 2 [Homo sapiens]
Length = 5675
Score = 165 bits (417), Expect = 2e-40
Identities = 109/280 (38%), Positives = 146/280 (52%), Gaps = 43/280 (15%)
Query: 29 ERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLLHEYKSSS 88
ER+ VQK+TFT+WIN HL K V DL+ D++DG L++LLEVLSG L E
Sbjct: 210 ERDKVQKKTFTKWINQHLMKVRK--HVNDLYEDLRDGHNLISLLEVLSGDTLPRE--KGR 265
Query: 89 HRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIKELTGNLS 148
R RL N+ AL +L+ VKLV+I +I DGNP L LGLIW IIL FQI ++
Sbjct: 266 MRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQISDIHVT-- 323
Query: 149 RNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKTRKY-GVA 207
G D S A + LL W Q+ T Y G+
Sbjct: 324 -------------GESEDMS--------------------AKERLLLWTQQATEGYAGIR 350
Query: 208 VQDFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQDALHIPRLLEPE 267
++F WR G F A+I P L+DM S NLE AF +A + + + RLL+PE
Sbjct: 351 CENFTTCWRDGKLFNAIIHKYRPDLIDMNTVAVQSNLANLEHAFYVA-EKIGVIRLLDPE 409
Query: 268 DIMVDTPDEQSIMTYVAQFLERFPELE--AEDIFDSDKEV 305
D+ V +PDE+S++TYV+ + FP++ E I +D EV
Sbjct: 410 DVDVSSPDEKSVITYVSSLYDAFPKVPEGGEGIGANDVEV 449
>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
Length = 3677
Score = 162 bits (409), Expect = 2e-39
Identities = 99/269 (36%), Positives = 149/269 (55%), Gaps = 38/269 (14%)
Query: 26 LQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLLHEYK 85
++ ERE+VQK+TFT+W+N K +++LF D+QDG+ L+ LLE L+G+ L E
Sbjct: 1 MEDEREDVQKKTFTKWVNAQFSKFGKQ-HIENLFSDLQDGRRLLDLLEGLTGQKLPKE-- 57
Query: 86 SSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIKELTG 145
S R+ LNN+ KAL+ L+++NV LV+I + +I DGN L LGLIWNIIL +Q+K +
Sbjct: 58 KGSTRVHALNNVNKALRVLQNNNVDLVNIGSTDIVDGNHKLTLGLIWNIILHWQVKNVMK 117
Query: 146 NLSRNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKTRKY- 204
N+ ++ Q + K LL+WV++ TR Y
Sbjct: 118 NI---------------------------------MAGLQQTNSEKILLSWVRQSTRNYP 144
Query: 205 GVAVQDFAGSWRSGLAFLAVIKAIDPSLVDMKQAL-ENSTRENLEKAFSIAQDALHIPRL 263
V V +F SW GLA A+I + P L D + + S + LE AF+IA+ L I +L
Sbjct: 145 QVNVINFTTSWSDGLALNALIHSHRPDLFDWNSVVCQQSATQRLEHAFNIARYQLGIEKL 204
Query: 264 LEPEDIMVDTPDEQSIMTYVAQFLERFPE 292
L+PED+ PD++SI+ Y+ + P+
Sbjct: 205 LDPEDVDTTYPDKKSILMYITSLFQVLPQ 233
>gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens]
Length = 3681
Score = 161 bits (408), Expect = 3e-39
Identities = 99/266 (37%), Positives = 147/266 (55%), Gaps = 38/266 (14%)
Query: 29 ERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLLHEYKSSS 88
ERE+VQK+TFT+W+N K +++LF D+QDG+ L+ LLE L+G+ L E S
Sbjct: 8 EREDVQKKTFTKWVNAQFSKFGKQ-HIENLFSDLQDGRRLLDLLEGLTGQKLPKE--KGS 64
Query: 89 HRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIKELTGNLS 148
R+ LNN+ KAL+ L+++NV LV+I + +I DGN L LGLIWNIIL +Q+K + N+
Sbjct: 65 TRVHALNNVNKALRVLQNNNVDLVNIGSTDIVDGNHKLTLGLIWNIILHWQVKNVMKNI- 123
Query: 149 RNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKTRKY-GVA 207
++ Q + K LL+WV++ TR Y V
Sbjct: 124 --------------------------------MAGLQQTNSEKILLSWVRQSTRNYPQVN 151
Query: 208 VQDFAGSWRSGLAFLAVIKAIDPSLVDMKQAL-ENSTRENLEKAFSIAQDALHIPRLLEP 266
V +F SW GLA A+I + P L D + + S + LE AF+IA+ L I +LL+P
Sbjct: 152 VINFTTSWSDGLALNALIHSHRPDLFDWNSVVCQQSATQRLEHAFNIARYQLGIEKLLDP 211
Query: 267 EDIMVDTPDEQSIMTYVAQFLERFPE 292
ED+ PD++SI+ Y+ + P+
Sbjct: 212 EDVDTTYPDKKSILMYITSLFQVLPQ 237
>gi|5032283 dystrophin Dp427m isoform [Homo sapiens]
Length = 3685
Score = 161 bits (408), Expect = 3e-39
Identities = 99/266 (37%), Positives = 147/266 (55%), Gaps = 38/266 (14%)
Query: 29 ERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLLHEYKSSS 88
ERE+VQK+TFT+W+N K +++LF D+QDG+ L+ LLE L+G+ L E S
Sbjct: 12 EREDVQKKTFTKWVNAQFSKFGKQ-HIENLFSDLQDGRRLLDLLEGLTGQKLPKE--KGS 68
Query: 89 HRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIKELTGNLS 148
R+ LNN+ KAL+ L+++NV LV+I + +I DGN L LGLIWNIIL +Q+K + N+
Sbjct: 69 TRVHALNNVNKALRVLQNNNVDLVNIGSTDIVDGNHKLTLGLIWNIILHWQVKNVMKNI- 127
Query: 149 RNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKTRKY-GVA 207
++ Q + K LL+WV++ TR Y V
Sbjct: 128 --------------------------------MAGLQQTNSEKILLSWVRQSTRNYPQVN 155
Query: 208 VQDFAGSWRSGLAFLAVIKAIDPSLVDMKQAL-ENSTRENLEKAFSIAQDALHIPRLLEP 266
V +F SW GLA A+I + P L D + + S + LE AF+IA+ L I +LL+P
Sbjct: 156 VINFTTSWSDGLALNALIHSHRPDLFDWNSVVCQQSATQRLEHAFNIARYQLGIEKLLDP 215
Query: 267 EDIMVDTPDEQSIMTYVAQFLERFPE 292
ED+ PD++SI+ Y+ + P+
Sbjct: 216 EDVDTTYPDKKSILMYITSLFQVLPQ 241
>gi|12025678 actinin, alpha 4 [Homo sapiens]
Length = 911
Score = 150 bits (380), Expect = 4e-36
Identities = 97/262 (37%), Positives = 134/262 (51%), Gaps = 44/262 (16%)
Query: 31 ENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMALLEVLSGRNLLHEYKSSSHR 90
E Q++TFT W N HL K +E D D +DG LM LLEV+SG L + R
Sbjct: 49 EKQQRKTFTAWCNSHLRKAGTQIENID--EDFRDGLKLMLLLEVISGERLPKPERGKM-R 105
Query: 91 IFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIKELTGNLSRN 150
+ ++NN+ KAL F+ VKLVSI A EI DGN + LG+IW IIL F I++++
Sbjct: 106 VHKINNVNKALDFIASKGVKLVSIGAEEIVDGNAKMTLGMIWTIILRFAIQDIS------ 159
Query: 151 SPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKTRKY-GVAVQ 209
++ A + LL W QRKT Y V VQ
Sbjct: 160 ---------------------------------VEETSAKEGLLLWCQRKTAPYKNVNVQ 186
Query: 210 DFAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQDALHIPRLLEPEDI 269
+F SW+ GLAF A+I P L++ + ++ NL AF +A+ L IP++L+ EDI
Sbjct: 187 NFHISWKDGLAFNALIHRHRPELIEYDKLRKDDPVTNLNNAFEVAEKYLDIPKMLDAEDI 246
Query: 270 M-VDTPDEQSIMTYVAQFLERF 290
+ PDE++IMTYV+ F F
Sbjct: 247 VNTARPDEKAIMTYVSSFYHAF 268
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.128 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,590,234
Number of Sequences: 37866
Number of extensions: 2071706
Number of successful extensions: 10869
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 411
Number of HSP's that attempted gapping in prelim test: 9325
Number of HSP's gapped (non-prelim): 1632
length of query: 1002
length of database: 18,247,518
effective HSP length: 112
effective length of query: 890
effective length of database: 14,006,526
effective search space: 12465808140
effective search space used: 12465808140
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.