Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 19743886
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19743886 regulatory factor X4 isoform a [Homo sapiens]
(641 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19743886 regulatory factor X4 isoform a [Homo sapiens] 1320 0.0
gi|47132527 regulatory factor X4 isoform c [Homo sapiens] 1251 0.0
gi|15011898 regulatory factor X4 isoform b [Homo sapiens] 841 0.0
gi|27734871 regulatory factor X, 6 [Homo sapiens] 332 6e-91
gi|238859557 regulatory factor X1 [Homo sapiens] 197 2e-50
gi|4506495 regulatory factor X3 isoform a [Homo sapiens] 193 4e-49
gi|19743879 regulatory factor X2 isoform b [Homo sapiens] 193 5e-49
gi|19743881 regulatory factor X2 isoform a [Homo sapiens] 193 5e-49
gi|19743884 regulatory factor X3 isoform b [Homo sapiens] 192 1e-48
gi|224586784 hypothetical protein LOC731220 [Homo sapiens] 85 2e-16
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 49 1e-05
gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 45 2e-04
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 44 6e-04
gi|116284392 mucin 2 precursor [Homo sapiens] 43 8e-04
gi|151301154 mucin 6, gastric [Homo sapiens] 43 0.001
gi|37595553 ring finger protein 111 [Homo sapiens] 43 0.001
gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Hom... 41 0.004
gi|109637784 GLIS family zinc finger 3 isoform a [Homo sapiens] 40 0.009
gi|109637782 GLIS family zinc finger 3 isoform b [Homo sapiens] 40 0.009
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens] 39 0.015
gi|167736355 mucin 4 isoform a [Homo sapiens] 39 0.015
gi|20070107 orthodenticle homeobox 1 [Homo sapiens] 39 0.019
gi|91982772 mucin 17 [Homo sapiens] 39 0.019
gi|33946327 nucleoporin 214kDa [Homo sapiens] 38 0.033
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 38 0.033
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 38 0.033
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] 38 0.033
gi|83367077 mucin 16 [Homo sapiens] 37 0.043
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 37 0.056
gi|239749213 PREDICTED: mucin 3B, cell surface associated, parti... 37 0.056
>gi|19743886 regulatory factor X4 isoform a [Homo sapiens]
Length = 641
Score = 1320 bits (3415), Expect = 0.0
Identities = 641/641 (100%), Positives = 641/641 (100%)
Query: 1 MNWAAFGGSEFFIPEGIQIDSRCPLSRNITEWYHYYGIAVKESSQYYDVMYSKKGAAWVS 60
MNWAAFGGSEFFIPEGIQIDSRCPLSRNITEWYHYYGIAVKESSQYYDVMYSKKGAAWVS
Sbjct: 1 MNWAAFGGSEFFIPEGIQIDSRCPLSRNITEWYHYYGIAVKESSQYYDVMYSKKGAAWVS 60
Query: 61 ETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILD 120
ETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILD
Sbjct: 61 ETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILD 120
Query: 121 TVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQA 180
TVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQA
Sbjct: 121 TVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQA 180
Query: 181 LPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLCQASR 240
LPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLCQASR
Sbjct: 181 LPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLCQASR 240
Query: 241 TVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDEHRKLITQLYQEFDHLLEEQSPI 300
TVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDEHRKLITQLYQEFDHLLEEQSPI
Sbjct: 241 TVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDEHRKLITQLYQEFDHLLEEQSPI 300
Query: 301 ESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFH 360
ESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFH
Sbjct: 301 ESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFH 360
Query: 361 LIHLMFDDYVLYLLESLHCQERANELMRAMKGEGSTAEVREEIILTEAAAPTPSPVPSFS 420
LIHLMFDDYVLYLLESLHCQERANELMRAMKGEGSTAEVREEIILTEAAAPTPSPVPSFS
Sbjct: 361 LIHLMFDDYVLYLLESLHCQERANELMRAMKGEGSTAEVREEIILTEAAAPTPSPVPSFS 420
Query: 421 PAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPC 480
PAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPC
Sbjct: 421 PAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPC 480
Query: 481 MRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPL 540
MRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPL
Sbjct: 481 MRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPL 540
Query: 541 HYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSAR 600
HYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSAR
Sbjct: 541 HYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSAR 600
Query: 601 YGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGEASTGWAK 641
YGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGEASTGWAK
Sbjct: 601 YGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGEASTGWAK 641
>gi|47132527 regulatory factor X4 isoform c [Homo sapiens]
Length = 735
Score = 1251 bits (3236), Expect = 0.0
Identities = 609/609 (100%), Positives = 609/609 (100%)
Query: 33 YHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKD 92
YHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKD
Sbjct: 127 YHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKD 186
Query: 93 LNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSS 152
LNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSS
Sbjct: 187 LNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSS 246
Query: 153 TVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR 212
TVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR
Sbjct: 247 TVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR 306
Query: 213 NIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTM 272
NIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTM
Sbjct: 307 NIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTM 366
Query: 273 EDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQ 332
EDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQ
Sbjct: 367 EDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQ 426
Query: 333 FLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKG 392
FLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKG
Sbjct: 427 FLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKG 486
Query: 393 EGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGA 452
EGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGA
Sbjct: 487 EGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGA 546
Query: 453 MQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNY 512
MQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNY
Sbjct: 547 MQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNY 606
Query: 513 GSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRL 572
GSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRL
Sbjct: 607 GSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRL 666
Query: 573 HPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYIN 632
HPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYIN
Sbjct: 667 HPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYIN 726
Query: 633 GEASTGWAK 641
GEASTGWAK
Sbjct: 727 GEASTGWAK 735
>gi|15011898 regulatory factor X4 isoform b [Homo sapiens]
Length = 563
Score = 841 bits (2173), Expect = 0.0
Identities = 420/424 (99%), Positives = 422/424 (99%)
Query: 33 YHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKD 92
YHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKD
Sbjct: 136 YHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKD 195
Query: 93 LNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSS 152
LNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSS
Sbjct: 196 LNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSS 255
Query: 153 TVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR 212
TVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR
Sbjct: 256 TVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR 315
Query: 213 NIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTM 272
NIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTM
Sbjct: 316 NIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTM 375
Query: 273 EDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQ 332
EDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQ
Sbjct: 376 EDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQ 435
Query: 333 FLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKG 392
FLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKG
Sbjct: 436 FLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKG 495
Query: 393 EGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGA 452
EGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTG
Sbjct: 496 EGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGN 555
Query: 453 MQSY 456
+S+
Sbjct: 556 GKSF 559
>gi|27734871 regulatory factor X, 6 [Homo sapiens]
Length = 928
Score = 332 bits (851), Expect = 6e-91
Identities = 200/530 (37%), Positives = 280/530 (52%), Gaps = 34/530 (6%)
Query: 33 YHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKD 92
YHYYGI +KESS YY +YS KG S + K T YS SK GTLLPEFP+ +
Sbjct: 190 YHYYGIGIKESSAYYHSVYSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTLLPEFPSAQH 249
Query: 93 LNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSS 152
L + ++KV T IMMY+THCQ ILD I NF+E+Q FLLHFWQGMP H+LP+L +
Sbjct: 250 LVYQGCISKDKVDTLIMMYKTHCQCILDNAINGNFEEIQHFLLHFWQGMPDHLLPLLENP 309
Query: 153 TVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR 212
+++I VCDSILYK ++ VL+P +Q +P+SL IR FAK ++W+ +L +LPE L
Sbjct: 310 VIIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALT 369
Query: 213 NIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTM 272
+ K + RRF L+RQTS HL Q +R + + M+ D VDLNSI Q L T+
Sbjct: 370 DKKIPIVRRFVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIERVDLNSIGSQALLTI 429
Query: 273 EDSRDEHRKLITQ-----LYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLK 327
S D + T+ ++QE LL++ + +E++IEWLDT+V++ V+K + + SLK
Sbjct: 430 SGSTDTESGIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQNGRSLK 489
Query: 328 KVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELM 387
K AQ FLL WS FG RV+ ++TL++A SFGSFHLI ++ D+Y+L +E+ ++ EL
Sbjct: 490 KRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAMETQFNNDKEQELQ 549
Query: 388 RAM-----KGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVE---VPPPSSPVSN 439
+ + S A A + S K+ + VE +P PSS
Sbjct: 550 NLLDKYMKNSDASKAAFTASPSSCFLANRNKGSMVSSDAVKNESHVETTYLPLPSSQPGG 609
Query: 440 --------PSPEYTGLSTTGAM---QSYTWSLTYTVTTAAGSPAENSQQLPCMRN----- 483
P+ + TG M Q +T ++ A S Q P
Sbjct: 610 LGPALHQFPAGNTDNMPLTGQMELSQIAGHLMTPPISPAMASRGSVINQGPMAGRPPSVG 669
Query: 484 --THVPSSSVTHRIPVY---PHREEHGYTGSYNYGSYGNQHPHPMQSQYP 528
PS T+ P+Y P Y+ S NY + PH YP
Sbjct: 670 PVLSAPSHCSTYPEPIYPALPQANHDFYSTSSNYQTVFRAQPHSTSGLYP 719
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 197 bits (501), Expect = 2e-50
Identities = 134/415 (32%), Positives = 205/415 (49%), Gaps = 64/415 (15%)
Query: 33 YHYYGIAVKESSQYYDVMYSKKGAAWVSE----------------------------TGK 64
YHYYG+ +K SS +M ++ A + TG
Sbjct: 504 YHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGQQPSTGL 563
Query: 65 KEVSKQTVAYSPRSKLGTLLPEFPNVKDLN---LPASLPEEKVSTFIMMYRTHCQRILDT 121
++S Q Y LP+F + DL LP + + F ++YR HC+ I+D
Sbjct: 564 SDISAQVQQYQQFLDASRSLPDFTEL-DLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDV 622
Query: 122 VIRANFDEVQSFLLHFW--------------------QGMPPHMLPVLGS-STVVNIVGV 160
++ F V++ FW + +P +L +L V+
Sbjct: 623 MVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPKAILVLLSKFEPVLQWTKH 682
Query: 161 CDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSR 220
CD++LY+ + +L+P VL+ +P +LTQ IR FAK L+ WL A+ ++PE + +K +
Sbjct: 683 CDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAG 742
Query: 221 RFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDEHR 280
F+Q LRR TSLNHL QA+R V+ + QML D VD ++ +Q + R E R
Sbjct: 743 AFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWV---CRCEDR 799
Query: 281 KLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGS--LKKVAQQFLLMWS 338
++ +L Q+F L++Q+ +E + WLD +V +V QGS K A+ FLL WS
Sbjct: 800 -VVQRLEQDFKVTLQQQNSLEQWAAWLDGVVS----QVLKPYQGSAGFPKAAKLFLLKWS 854
Query: 339 CFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGE 393
+ + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E Q + E A+ GE
Sbjct: 855 FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAK-GETPIAVMGE 908
>gi|4506495 regulatory factor X3 isoform a [Homo sapiens]
Length = 707
Score = 193 bits (491), Expect = 4e-49
Identities = 129/420 (30%), Positives = 202/420 (48%), Gaps = 61/420 (14%)
Query: 33 YHYYGIAVKESS----------------------QYYDVMYSKKGAA-WVSETGKK---E 66
YHYYGI VK S Q Y M G A + +G++
Sbjct: 249 YHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQQTGTS 308
Query: 67 VSKQTVAYSPRSK----LGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTV 122
V + +A S + LPEF V+ +LP E + + +YR HC+ ILD V
Sbjct: 309 VEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEAILDVV 368
Query: 123 IRANFDEVQSFLLHFWQGMP------------------------PHMLPVLGSSTVVNIV 158
+ F ++ FW+ P ++ + +++ +
Sbjct: 369 VNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHESILKWM 428
Query: 159 GVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFEL 218
CD +Y+A+ +L+P VL+ +P +LTQ IR FAK L+ WL A++++P+ + K
Sbjct: 429 CNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQTKVAA 488
Query: 219 SRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDE 278
F+Q LRR TSLNHL QA+R V+ + QML D VD ++ +Q + + +
Sbjct: 489 VSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCDDN- 547
Query: 279 HRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWS 338
++ +L +F L++QS +E + WLD ++ + + + S K A+QFLL WS
Sbjct: 548 ---MVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGR--PSFPKAARQFLLKWS 602
Query: 339 CFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGEGSTAE 398
+ + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E + E A+ GE AE
Sbjct: 603 FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEH-RVAQATGETPIAVMGEVREAE 661
>gi|19743879 regulatory factor X2 isoform b [Homo sapiens]
Length = 698
Score = 193 bits (490), Expect = 5e-49
Identities = 133/414 (32%), Positives = 203/414 (49%), Gaps = 60/414 (14%)
Query: 33 YHYYGIAVK---------ESSQYYDV----MYSKKGAAWVSET----------GKKEVSK 69
YHYYGI +K E +QY + M+ K +T G +
Sbjct: 240 YHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPRYRPAQKTDSLGDSGSHSGLHSTPE 299
Query: 70 QTVAYSPRSK-----LGTLLPEFP--NVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTV 122
QT+A + + + PEFP ++ L + V ++YR HC+ +D V
Sbjct: 300 QTMAVQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDGVTLHDVKALQLVYRRHCEATVDVV 359
Query: 123 IRANFDEVQSFLLHFWQGMP-----PHMLP---------VLGSSTVVNI---------VG 159
+ F ++ L FW P LP VL ++++ +
Sbjct: 360 MNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDPEGAVLPKDKLISLCQCDPILRWMR 419
Query: 160 VCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELS 219
CD ILY+A+ +L+P VL+ +P +LTQ IR FAK L+ WL A+ D P+ + K +
Sbjct: 420 SCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKSLEGWLTNAMSDFPQQVIQTKVGVV 479
Query: 220 RRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDEH 279
F+Q LRR TSLNHL QA+R V+ + QML D VD ++ +Q + +
Sbjct: 480 SAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQC----E 535
Query: 280 RKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSC 339
++ +L Q+F L++QS ++ + WLD++V + + + A S K A+QFLL WS
Sbjct: 536 ESVVQRLEQDFKLTLQQQSSLDQWASWLDSVVTQVLKQHAG--SPSFPKAARQFLLKWSF 593
Query: 340 FGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGE 393
+ + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E E E A+ GE
Sbjct: 594 YSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEH-RVAEATGETPIAVMGE 646
>gi|19743881 regulatory factor X2 isoform a [Homo sapiens]
Length = 723
Score = 193 bits (490), Expect = 5e-49
Identities = 133/414 (32%), Positives = 203/414 (49%), Gaps = 60/414 (14%)
Query: 33 YHYYGIAVK---------ESSQYYDV----MYSKKGAAWVSET----------GKKEVSK 69
YHYYGI +K E +QY + M+ K +T G +
Sbjct: 265 YHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPRYRPAQKTDSLGDSGSHSGLHSTPE 324
Query: 70 QTVAYSPRSK-----LGTLLPEFP--NVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTV 122
QT+A + + + PEFP ++ L + V ++YR HC+ +D V
Sbjct: 325 QTMAVQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDGVTLHDVKALQLVYRRHCEATVDVV 384
Query: 123 IRANFDEVQSFLLHFWQGMP-----PHMLP---------VLGSSTVVNI---------VG 159
+ F ++ L FW P LP VL ++++ +
Sbjct: 385 MNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDPEGAVLPKDKLISLCQCDPILRWMR 444
Query: 160 VCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELS 219
CD ILY+A+ +L+P VL+ +P +LTQ IR FAK L+ WL A+ D P+ + K +
Sbjct: 445 SCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKSLEGWLTNAMSDFPQQVIQTKVGVV 504
Query: 220 RRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDEH 279
F+Q LRR TSLNHL QA+R V+ + QML D VD ++ +Q + +
Sbjct: 505 SAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQC----E 560
Query: 280 RKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSC 339
++ +L Q+F L++QS ++ + WLD++V + + + A S K A+QFLL WS
Sbjct: 561 ESVVQRLEQDFKLTLQQQSSLDQWASWLDSVVTQVLKQHAG--SPSFPKAARQFLLKWSF 618
Query: 340 FGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGE 393
+ + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E E E A+ GE
Sbjct: 619 YSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEH-RVAEATGETPIAVMGE 671
>gi|19743884 regulatory factor X3 isoform b [Homo sapiens]
Length = 749
Score = 192 bits (487), Expect = 1e-48
Identities = 123/397 (30%), Positives = 194/397 (48%), Gaps = 60/397 (15%)
Query: 33 YHYYGIAVKESS----------------------QYYDVMYSKKGAA-WVSETGKK---E 66
YHYYGI VK S Q Y M G A + +G++
Sbjct: 249 YHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQQTGTS 308
Query: 67 VSKQTVAYSPRSK----LGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTV 122
V + +A S + LPEF V+ +LP E + + +YR HC+ ILD V
Sbjct: 309 VEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEAILDVV 368
Query: 123 IRANFDEVQSFLLHFWQGMP------------------------PHMLPVLGSSTVVNIV 158
+ F ++ FW+ P ++ + +++ +
Sbjct: 369 VNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHESILKWM 428
Query: 159 GVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFEL 218
CD +Y+A+ +L+P VL+ +P +LTQ IR FAK L+ WL A++++P+ + K
Sbjct: 429 CNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQTKVAA 488
Query: 219 SRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDE 278
F+Q LRR TSLNHL QA+R V+ + QML D VD ++ +Q + + +
Sbjct: 489 VSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCDDN- 547
Query: 279 HRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWS 338
++ +L +F L++QS +E + WLD ++ + + + S K A+QFLL WS
Sbjct: 548 ---MVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGR--PSFPKAARQFLLKWS 602
Query: 339 CFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLE 375
+ + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E
Sbjct: 603 FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVE 639
>gi|224586784 hypothetical protein LOC731220 [Homo sapiens]
Length = 473
Score = 85.1 bits (209), Expect = 2e-16
Identities = 70/285 (24%), Positives = 128/285 (44%), Gaps = 13/285 (4%)
Query: 111 YRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAIS 170
Y +C+ IL V + L FW+ + + ++ V + D LYK I
Sbjct: 69 YCNYCRDILRNV--------EDLLTSFWKSLQQDTVMLMSLPDVCQLFKCYDVQLYKGIE 120
Query: 171 GVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRRFSQILRRQT 230
VL+ L+ + + ++ F+K+ WL AL +P L+ K + F + LRR+T
Sbjct: 121 DVLLHDFLEDVSIQYLKSVQLFSKKFKLWLLNALEGVPALLQISKLKEVTLFVKRLRRKT 180
Query: 231 SLNHLCQASRTVIHSADITFQMLEDWR---NVDLNSITKQTLYTMEDSRDE-HRKLITQL 286
L+++ + R V+ S + D + N + +K+ L + DE +
Sbjct: 181 YLSNMAKTMRMVLKSKRRVSVLKSDLQAIINQGTLATSKKALASDRSGADELENNPEMKC 240
Query: 287 YQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIR 346
+ LL + + ++ L + + V + + ++ K+A F L W+ T V +
Sbjct: 241 LRNLISLLGTSTDLRVFLSCLSSHLQAFVFQTSRSKE-EFTKLAASFQLRWNLLLTAVSK 299
Query: 347 DMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMK 391
MTL SFGS+HL HL+ +Y++++L+S +E E M +K
Sbjct: 300 AMTLCHRDSFGSWHLFHLLLLEYMIHILQSCLEEEEEEEDMGTVK 344
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 49.3 bits (116), Expect = 1e-05
Identities = 66/239 (27%), Positives = 95/239 (39%), Gaps = 26/239 (10%)
Query: 410 APTPSPV-PSFSPAK---SATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLT---Y 462
+P+ SP PS+SP S TS P S S SP YT S + + S ++S T Y
Sbjct: 1717 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNY 1776
Query: 463 TVTTAAGSPAENS------QQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYG 516
T T+ SP S P + S T + P Y S +Y
Sbjct: 1777 TPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTS 1836
Query: 517 NQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPT- 575
++ S P+ P T S P + + S P SPTS P +TP+ PT
Sbjct: 1837 PKYTPTSPSYSPSSPEYTPTS-PKYSPTSPKYSPTSPKYSPTS---PTYSPTTPKYSPTS 1892
Query: 576 ----PVTPRW-PEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFA 629
P +P + P P + + S S +Y +S Y+P T+ + S Y PG++
Sbjct: 1893 PTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP-TSPKGSTYSPTS--PGYS 1948
Score = 46.2 bits (108), Expect = 9e-05
Identities = 61/215 (28%), Positives = 86/215 (40%), Gaps = 20/215 (9%)
Query: 410 APTPSPV-PSFSPAK---SATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLT---Y 462
+P+ SP PS+SP S TS P S S SP Y+ S + + S ++S T Y
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1671
Query: 463 TVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHP 522
+ T+ + SP S P + S S + P Y S +Y +
Sbjct: 1672 SPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730
Query: 523 MQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPT-SRMEPCLMSSTPRLHPT-----P 576
S P P + S +Y+P +S Y SP+ S P ++P PT P
Sbjct: 1731 SPSYSPTSPSYSPTSP--NYSP---TSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSP 1785
Query: 577 VTPRW-PEVPSANTCYTSPSVHSARYGNSSDMYTP 610
+P + P PS + S S S RY S YTP
Sbjct: 1786 TSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTP 1820
Score = 41.2 bits (95), Expect = 0.003
Identities = 54/200 (27%), Positives = 75/200 (37%), Gaps = 38/200 (19%)
Query: 419 FSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQQL 478
FSP+ ++ + P SP +P+P + GSP +S +
Sbjct: 1546 FSPSAASDASGFSPGYSPAWSPTP-----------------------GSPGSPGPSSPYI 1582
Query: 479 PCMRNTHVPSSSVTHRIPVYPHREEHGYT-GSYNYGSYGNQHPHPMQSQYPALPHDTAIS 537
P PS S T P Y R GYT S +Y + S P P+ + S
Sbjct: 1583 PSPGGAMSPSYSPTS--PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1640
Query: 538 GPLHYAPYHRS-SAQYPFNSPTSRMEPCLMSSTPRLHPT-----PVTPRW-PEVPSANTC 590
Y+P S S P SPTS P ++P PT P +P + P PS +
Sbjct: 1641 P--SYSPTSPSYSPTSPSYSPTS---PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 591 YTSPSVHSARYGNSSDMYTP 610
S S S Y +S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPSYSP 1715
Score = 30.0 bits (66), Expect = 6.8
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 410 APTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAG 469
+PT SP SP + TS + P S S SP+Y+ S T + S S TY+ T+
Sbjct: 1892 SPTYSPT---SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGS-TYSPTSPGY 1947
Query: 470 SPAENSQQL 478
SP + L
Sbjct: 1948 SPTSPTYSL 1956
>gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]
Length = 2639
Score = 45.4 bits (106), Expect = 2e-04
Identities = 53/218 (24%), Positives = 79/218 (36%), Gaps = 23/218 (10%)
Query: 406 TEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAM---------QSY 456
T PTP+ S +P T+ V P +P +P T ++TT + Q+
Sbjct: 1321 TVTPTPTPTSTQSTTPTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP 1380
Query: 457 TWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHREEHGYTGSYNYGSY 515
T + T TT +P Q P T P ++ T P P + T +
Sbjct: 1381 TTTPITTTTTVTPTPTPTGTQTP----TSTPITTTTTVTPTPTPTGTQTPTTTPITTTTT 1436
Query: 516 GNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPT 575
P P +Q P TAI+ P P + T P ++T PT
Sbjct: 1437 VTPTPTPTGTQAPT---PTAITTTSTVTP-----TPTPTGTQTPTTTPITTTTTVTPTPT 1488
Query: 576 PVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 613
P + P P+A T T+ + G + TP+TT
Sbjct: 1489 PTGTQTP-TPTAITTTTTVTPTPTPTGTQTPTSTPITT 1525
Score = 40.4 bits (93), Expect = 0.005
Identities = 59/251 (23%), Positives = 88/251 (35%), Gaps = 34/251 (13%)
Query: 394 GSTAEVREEIILTEAAAPTPSPV----PSFSPAKSATSVEVPPPSSPVSNPSPEYTGLST 449
G+ A I T PTP+P P+ +P + T+ V P +P +P T ++T
Sbjct: 1445 GTQAPTPTAITTTSTVTPTPTPTGTQTPTTTPITTTTT--VTPTPTPTGTQTPTPTAITT 1502
Query: 450 TGAM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YP 499
T + Q+ T + T TT +P Q P T P S+ T P P
Sbjct: 1503 TTTVTPTPTPTGTQTPTSTPITTTTTVTPTPTPTGTQTP----TPTPISTTTTVTPTPTP 1558
Query: 500 HREEHGYTGSYNYGSYGNQHPHPMQSQYP--ALPHDTAISGPLHYAPYHRSSAQYPFN-- 555
+ T + P P +Q P L T P +S+ P
Sbjct: 1559 TGTQTPTTTPITTTTTVTPTPTPTGTQTPTTVLITTTTTMTPTPTPTSTKSTTVTPITTT 1618
Query: 556 -------SPTSRMEPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSD 606
+PT P + +S+T + PTP P +T T+P +
Sbjct: 1619 TTVTATPTPTGTQTPTMIPISTTTTVTPTPTPTTGSTGPPTHTS-TAPIAELTTSNPPPE 1677
Query: 607 MYTPLTTRRNS 617
TP T+R S
Sbjct: 1678 SSTPQTSRSTS 1688
Score = 38.9 bits (89), Expect = 0.015
Identities = 53/233 (22%), Positives = 84/233 (36%), Gaps = 27/233 (11%)
Query: 394 GSTAEVREEIILTEAAAPTPSPV----PSFSPAKSATSVEVPPPSSPVSNPSPEYTGLST 449
G+ I T PTP+P P+ +P + T+ V P +P +P T ++T
Sbjct: 1353 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTT--VTPTPTPTGTQTPTSTPITT 1410
Query: 450 TGAM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPH 500
T + Q+ T + T TT +P Q P T + ++S P P
Sbjct: 1411 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQAP--TPTAITTTSTVTPTPT-PT 1467
Query: 501 REEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSR 560
+ T + P P +Q P TAI+ P P + T
Sbjct: 1468 GTQTPTTTPITTTTTVTPTPTPTGTQTPT---PTAITTTTTVTP-----TPTPTGTQTPT 1519
Query: 561 MEPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 613
P ++T PTP + P P+ + T+ + G + TP+TT
Sbjct: 1520 STPITTTTTVTPTPTPTGTQTP-TPTPISTTTTVTPTPTPTGTQTPTTTPITT 1571
Score = 35.8 bits (81), Expect = 0.12
Identities = 51/225 (22%), Positives = 78/225 (34%), Gaps = 54/225 (24%)
Query: 405 LTEAAAPTPSPVPSFSPAKSATSV----EVPPPSSPVSNPSPEYTGLSTTGAM------- 453
+T TP+P P+ + A + T++ V P +P +P T ++TT +
Sbjct: 1431 ITTTTTVTPTPTPTGTQAPTPTAITTTSTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 1490
Query: 454 --QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYN 511
Q+ T + T TT +P Q P T P ++ T P
Sbjct: 1491 GTQTPTPTAITTTTTVTPTPTPTGTQTP----TSTPITTTTTVTPT-------------- 1532
Query: 512 YGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPR 571
P P +Q P T IS P P + T P ++T
Sbjct: 1533 --------PTPTGTQTPT---PTPISTTTTVTP-----TPTPTGTQTPTTTPITTTTTVT 1576
Query: 572 LHPTPV---TPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 613
PTP TP + + T +P+ S + S TP+TT
Sbjct: 1577 PTPTPTGTQTPTTVLITTTTTMTPTPTPTSTK----STTVTPITT 1617
Score = 34.7 bits (78), Expect = 0.28
Identities = 50/188 (26%), Positives = 74/188 (39%), Gaps = 29/188 (15%)
Query: 407 EAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTT 466
E + P P+ +P ++ + PP S ++P T +TTG+ + T S T TT
Sbjct: 1706 EMTSTAPPSTPT-APTTTSGGHTLSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTVQTTTT 1764
Query: 467 AAGSPAENSQQLPCMRNT----HVPSSSVTHRI--PVYPHREEHGYTGSYNYGSYGNQHP 520
+A +P P + T PSS + + Y E Y G+Y Y
Sbjct: 1765 SAWTPTPTPLSTPSIIRTTGLRPYPSSVLICCVLNDTYYAPGEEVYNGTYGDTCYF---- 1820
Query: 521 HPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPT---SRMEPCLMSSTPRLHPTPV 577
+ ++S L + Y+ S P +PT S P SSTP PTP
Sbjct: 1821 -----------VNCSLSCTLEF--YNWSCPSTPSPTPTPSKSTPTPSKPSSTPS-KPTPG 1866
Query: 578 TPRWPEVP 585
T + PE P
Sbjct: 1867 T-KPPECP 1873
Score = 33.5 bits (75), Expect = 0.62
Identities = 55/242 (22%), Positives = 84/242 (34%), Gaps = 27/242 (11%)
Query: 394 GSTAEVREEIILTEAAAPTPSPV--PSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTG 451
G+ I T PTP+P + +P +T+ V P +P +P T ++TT
Sbjct: 1514 GTQTPTSTPITTTTTVTPTPTPTGTQTPTPTPISTTTTVTPTPTPTGTQTPTTTPITTTT 1573
Query: 452 AM---------QSYTWSLTYTVTTAAGSPAENSQQ----LPCMRNTHV---PSSSVTHRI 495
+ Q+ T L T TT +P S + P T V P+ + T
Sbjct: 1574 TVTPTPTPTGTQTPTTVLITTTTTMTPTPTPTSTKSTTVTPITTTTTVTATPTPTGTQTP 1633
Query: 496 PVYPHREEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFN 555
+ P T + + G+ P S P T+ P P S P
Sbjct: 1634 TMIPISTTTTVTPTPT-PTTGSTGPPTHTSTAPIAELTTSNPPPESSTPQTSRSTSSPLT 1692
Query: 556 SPTSRMEPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRR 615
T+ L + P + T P P P+A T T+ H+ S+ P T R
Sbjct: 1693 ESTT----LLSTLPPAIEMTSTAP--PSTPTAPT--TTSGGHTLSPPPSTTTSPPGTPTR 1744
Query: 616 NS 617
+
Sbjct: 1745 GT 1746
>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
Length = 1243
Score = 43.5 bits (101), Expect = 6e-04
Identities = 47/217 (21%), Positives = 82/217 (37%), Gaps = 30/217 (13%)
Query: 384 NELMRAMKGEGSTAEVRE-----EIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVS 438
NE + + +G +RE E +L P + + SP + P P+ PV
Sbjct: 722 NEFILPSERDGFLRRIREIIQRVETLLKRDTGPMEAAEDTLSPQEEPA----PLPALPVP 777
Query: 439 NPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVY 498
P P L ++ +++ +W+ T +++ G+P N P + ++ P++
Sbjct: 778 LPDPSNEELQSSTSLEHRSWTAFSTSSSSPGTPLSPG-------NPFSPGTPISPG-PIF 829
Query: 499 P------HREEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQY 552
P H ++ + S N PHP S P PL P+ +
Sbjct: 830 PITSPPCHPSPSPFSPISSQVS-SNPSPHPTSSPLPFSSSTPEFPVPLSQCPW----SSL 884
Query: 553 PFNSPTSRMEPC--LMSSTPRLHPTPVTPRWPEVPSA 587
P SP + C + S+P P P T +P +A
Sbjct: 885 PTTSPPTFSPTCSQVTLSSPFFPPCPSTSSFPSTTAA 921
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 43.1 bits (100), Expect = 8e-04
Identities = 54/237 (22%), Positives = 85/237 (35%), Gaps = 33/237 (13%)
Query: 393 EGSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTT 450
E T I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 1891 ENPTPPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTT 1950
Query: 451 GAM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPH 500
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 1951 TTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPT 2006
Query: 501 REEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSR 560
+ T + P P +Q P P ++ P +PT
Sbjct: 2007 GTQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGT 2054
Query: 561 MEPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 613
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 2055 QTPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2110
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 394 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 451
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 2053 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 2112
Query: 452 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 501
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 2113 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 2168
Query: 502 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 561
+ T + P P +Q P P ++ P +PT
Sbjct: 2169 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 2216
Query: 562 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 613
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 2217 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2271
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 394 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 451
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 2214 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 2273
Query: 452 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 501
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 2274 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 2329
Query: 502 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 561
+ T + P P +Q P P ++ P +PT
Sbjct: 2330 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 2377
Query: 562 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 613
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 2378 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2432
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 394 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 451
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 2375 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 2434
Query: 452 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 501
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 2435 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 2490
Query: 502 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 561
+ T + P P +Q P P ++ P +PT
Sbjct: 2491 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 2538
Query: 562 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 613
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 2539 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2593
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 394 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 451
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 2536 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 2595
Query: 452 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 501
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 2596 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 2651
Query: 502 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 561
+ T + P P +Q P P ++ P +PT
Sbjct: 2652 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 2699
Query: 562 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 613
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 2700 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2754
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 394 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 451
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 2697 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 2756
Query: 452 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 501
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 2757 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 2812
Query: 502 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 561
+ T + P P +Q P P ++ P +PT
Sbjct: 2813 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 2860
Query: 562 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 613
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 2861 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2915
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 394 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 451
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 2858 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 2917
Query: 452 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 501
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 2918 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 2973
Query: 502 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 561
+ T + P P +Q P P ++ P +PT
Sbjct: 2974 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 3021
Query: 562 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 613
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 3022 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3076
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 394 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 451
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 3019 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 3078
Query: 452 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 501
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 3079 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 3134
Query: 502 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 561
+ T + P P +Q P P ++ P +PT
Sbjct: 3135 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 3182
Query: 562 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 613
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 3183 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3237
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 394 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 451
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 3180 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 3239
Query: 452 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 501
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 3240 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 3295
Query: 502 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 561
+ T + P P +Q P P ++ P +PT
Sbjct: 3296 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 3343
Query: 562 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 613
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 3344 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3398
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 394 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 451
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 3341 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 3400
Query: 452 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 501
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 3401 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 3456
Query: 502 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 561
+ T + P P +Q P P ++ P +PT
Sbjct: 3457 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 3504
Query: 562 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 613
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 3505 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3559
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 394 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 451
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 3502 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 3561
Query: 452 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 501
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 3562 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 3617
Query: 502 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 561
+ T + P P +Q P P ++ P +PT
Sbjct: 3618 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 3665
Query: 562 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 613
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 3666 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3720
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 394 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 451
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 3663 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 3722
Query: 452 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 501
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 3723 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 3778
Query: 502 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 561
+ T + P P +Q P P ++ P +PT
Sbjct: 3779 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 3826
Query: 562 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 613
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 3827 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3881
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 394 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 451
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 3824 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 3883
Query: 452 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 501
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 3884 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 3939
Query: 502 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 561
+ T + P P +Q P P ++ P +PT
Sbjct: 3940 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 3987
Query: 562 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 613
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 3988 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 4042
Score = 39.7 bits (91), Expect = 0.009
Identities = 48/217 (22%), Positives = 78/217 (35%), Gaps = 31/217 (14%)
Query: 394 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 451
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 3985 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 4044
Query: 452 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 501
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 4045 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 4100
Query: 502 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 561
+ T + P P +Q P P ++ P +PT
Sbjct: 4101 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 4148
Query: 562 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV 596
P +++T + PTP TP + P+ T+ +V
Sbjct: 4149 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTV 4184
Score = 35.0 bits (79), Expect = 0.21
Identities = 43/202 (21%), Positives = 67/202 (33%), Gaps = 13/202 (6%)
Query: 412 TPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSP 471
TPSP + + T+ PP ++P++ P+ T TT T + T TT SP
Sbjct: 1483 TPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTP-SP 1541
Query: 472 AENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQSQYPALP 531
+ P T +P ++ P T P P + P+ P
Sbjct: 1542 PTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTT------------PSPPTTTTPSPP 1589
Query: 532 HDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVPSANTCY 591
T + P P ++ T+ P TP T + P P T
Sbjct: 1590 TITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTT 1649
Query: 592 TSPSVHSARYGNSSDMYTPLTT 613
T P + ++ P+TT
Sbjct: 1650 TPPPTTTPSPPTTTTPSPPITT 1671
Score = 34.7 bits (78), Expect = 0.28
Identities = 47/208 (22%), Positives = 72/208 (34%), Gaps = 20/208 (9%)
Query: 406 TEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVT 465
T TPSP + +P+ + PPP++ PSP T +TT + T S T
Sbjct: 1571 TPPPTTTPSPPTTTTPSPPTITTTTPPPTTT---PSPPTT--TTTTPPPTTTPS---PPT 1622
Query: 466 TAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQS 525
T +P ++ LP P ++ T P T P P +
Sbjct: 1623 TTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTT------------PSPPIT 1670
Query: 526 QYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVP 585
P T S P+ P ++ + T+ P ++TP TP P
Sbjct: 1671 TTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTT 1730
Query: 586 SANTCYTSPSVHSARYGNSSDMYTPLTT 613
+ T SP + + +PLTT
Sbjct: 1731 PSPTTTPSPPTTTMTTLPPTTTSSPLTT 1758
Score = 34.7 bits (78), Expect = 0.28
Identities = 50/188 (26%), Positives = 74/188 (39%), Gaps = 29/188 (15%)
Query: 407 EAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTT 466
E + P P+ +P ++ + PP S ++P T +TTG+ + T S T TT
Sbjct: 4246 EMTSTAPPSTPT-APTTTSGGHTLSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTVQTTTT 4304
Query: 467 AAGSPAENSQQLPCMRNT----HVPSSSVTHRI--PVYPHREEHGYTGSYNYGSYGNQHP 520
+A +P P + T PSS + + Y E Y G+Y Y
Sbjct: 4305 SAWTPTPTPLSTPSIIRTTGLRPYPSSVLICCVLNDTYYAPGEEVYNGTYGDTCYF---- 4360
Query: 521 HPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPT---SRMEPCLMSSTPRLHPTPV 577
+ ++S L + Y+ S P +PT S P SSTP PTP
Sbjct: 4361 -----------VNCSLSCTLEF--YNWSCPSTPSPTPTPSKSTPTPSKPSSTPS-KPTPG 4406
Query: 578 TPRWPEVP 585
T + PE P
Sbjct: 4407 T-KPPECP 4413
Score = 34.3 bits (77), Expect = 0.36
Identities = 45/206 (21%), Positives = 70/206 (33%), Gaps = 21/206 (10%)
Query: 412 TPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVT----TA 467
T +P P+ +P+ T+ PPP++ S P +STT T T T T
Sbjct: 1429 TTTPPPTTTPSPPITTTTTPPPTTTPSPP------ISTTTTPPPTTTPSPPTTTPSPPTT 1482
Query: 468 AGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQSQY 527
SP + P T P ++ P+ P + P +
Sbjct: 1483 TPSPPTTTTTTPPPTTTPSPPTTT----PITPPASTTTLPPTTTPSPPTTTTTTPPPTTT 1538
Query: 528 PALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVPSA 587
P+ P T I+ P ++ P PT+ P P P+P T P P+
Sbjct: 1539 PSPPTTTPITPPTSTTTLPPTTTPSP--PPTTTTTP-----PPTTTPSPPTTTTPSPPTI 1591
Query: 588 NTCYTSPSVHSARYGNSSDMYTPLTT 613
T P+ + ++ P TT
Sbjct: 1592 TTTTPPPTTTPSPPTTTTTTPPPTTT 1617
Score = 32.3 bits (72), Expect = 1.4
Identities = 43/195 (22%), Positives = 70/195 (35%), Gaps = 23/195 (11%)
Query: 424 SATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRN 483
+ T PP ++P++ + + TG T +T T TT +P Q P
Sbjct: 1888 TTTENPTPPTTTPITTTTTVTPTPTPTGTQTPTTTPIT-TTTTVTPTPTPTGTQTP---- 1942
Query: 484 THVPSSSVTHRIPV-YPHREEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHY 542
T P ++ T P P + T + P P +Q P
Sbjct: 1943 TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTT------------ 1990
Query: 543 APYHRSSAQYPFNSPTSRMEPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HS 598
P ++ P +PT P +++T + PTP TP + P+ T+ +V
Sbjct: 1991 TPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTP 2049
Query: 599 ARYGNSSDMYTPLTT 613
G + TP+TT
Sbjct: 2050 TPTGTQTPTTTPITT 2064
Score = 30.8 bits (68), Expect = 4.0
Identities = 45/169 (26%), Positives = 67/169 (39%), Gaps = 18/169 (10%)
Query: 412 TPSPVPSFSPAKSATSVE-VPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGS 470
TPSP P+ +P+ TS +P P + PSP T +TT + T S T TT +
Sbjct: 1398 TPSP-PTTTPSPPPTSTTTLP----PTTTPSPPTT--TTTTPPPTTTPSPPITTTT---T 1447
Query: 471 PAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQSQYPAL 530
P + P + T P + T P P T + + + P P + P+
Sbjct: 1448 PPPTTTPSPPISTTTTPPPTTT---PSPPTTTPSPPTTTPSPPTTTTTTPPPTTT--PSP 1502
Query: 531 PHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTP 579
P T I+ P ++ P + T+ P S P TP+TP
Sbjct: 1503 PTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPT--TTPITP 1549
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 42.7 bits (99), Expect = 0.001
Identities = 57/212 (26%), Positives = 79/212 (37%), Gaps = 35/212 (16%)
Query: 390 MKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLST 449
+K GST T + +PS SFS AK++TS+ P S PE T ST
Sbjct: 1883 IKATGSTHTAPPMTPTTSGTSQSPS---SFSTAKTSTSL----PYHTSSTHHPEVTPTST 1935
Query: 450 TGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGS 509
T +T T T T A + + +S +LP TH P TGS
Sbjct: 1936 TNITPKHT--STGTRTPVAHTTSASSSRLPTPFTTHSPP------------------TGS 1975
Query: 510 YNYGSYGNQHPHPMQ--SQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMS 567
+ S G Q + YP P + P H P+ +S P M+
Sbjct: 1976 SPFSSTGPMTATSFQTTTTYPT-PSHPQTTLPTHVPPF-STSLVTPSTHTVIITTHTQMA 2033
Query: 568 STPRLHPTPVTPRWPEVPSANTCYTSPSVHSA 599
++ +H TP VP T + S H+A
Sbjct: 2034 TSASIHSTPT----GTVPPPTTLKATGSTHTA 2061
Score = 42.0 bits (97), Expect = 0.002
Identities = 52/202 (25%), Positives = 78/202 (38%), Gaps = 26/202 (12%)
Query: 405 LTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTV 464
+T + T SFS AK++TS+ S S PE T STT ++T T T
Sbjct: 1726 MTVTTSGTSQSRSSFSTAKTSTSLH----SHTSSTHHPEVTSTSTTSITPNHT--STGTR 1779
Query: 465 TTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQ 524
T A + + S +LP TH P + T P+ TG S+ +P
Sbjct: 1780 TPVAHTTSATSSRLPTPFTTHSPPTGTT---PI-------SSTGPVTATSFQTTTTYPT- 1828
Query: 525 SQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLH--PTPVTPRWP 582
P+ PH T P H P +S P M+++ +H PT P
Sbjct: 1829 ---PSHPHTTL---PTH-VPSFSTSLVTPSTHTVIIPTHTQMATSASIHSMPTGTIPPPT 1881
Query: 583 EVPSANTCYTSPSVHSARYGNS 604
+ + + +T+P + G S
Sbjct: 1882 TIKATGSTHTAPPMTPTTSGTS 1903
Score = 37.7 bits (86), Expect = 0.033
Identities = 56/206 (27%), Positives = 82/206 (39%), Gaps = 44/206 (21%)
Query: 424 SATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRN 483
SATS +P P + S P+ T +S+TG + + ++ T T T P+ LP
Sbjct: 1787 SATSSRLPTPFTTHSPPTGT-TPISSTGPVTATSFQTTTTYPT----PSHPHTTLP---- 1837
Query: 484 THVPSSSV------THRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQ---SQYPALPHDT 534
THVPS S TH + + H + ++ + P ++ S + A P
Sbjct: 1838 THVPSFSTSLVTPSTHTVIIPTHTQMATSASIHSMPTGTIPPPTTIKATGSTHTAPPMTP 1897
Query: 535 AISG----PLHYA--------PYHRSSAQYPFNSPTS--RMEPCLMSS---TPRLH---- 573
SG P ++ PYH SS +P +PTS + P S+ TP H
Sbjct: 1898 TTSGTSQSPSSFSTAKTSTSLPYHTSSTHHPEVTPTSTTNITPKHTSTGTRTPVAHTTSA 1957
Query: 574 -----PTPVTPRWPEVPSANTCYTSP 594
PTP T P S+ T P
Sbjct: 1958 SSSRLPTPFTTHSPPTGSSPFSSTGP 1983
Score = 33.1 bits (74), Expect = 0.81
Identities = 57/228 (25%), Positives = 86/228 (37%), Gaps = 29/228 (12%)
Query: 390 MKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLST 449
+K GST + T T + S + AK++TS+ S S E T ST
Sbjct: 1659 LKATGSTHTAPTMTLTTSG---TSQALSSLNTAKTSTSLH----SHTSSTHHAEATSTST 1711
Query: 450 TGAMQSYTWSLT--YTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYT 507
T + T + T TVTT+ S + +S + +S TH +P T
Sbjct: 1712 TNITPNPTSTGTPPMTVTTSGTSQSRSSFSTAKTSTSLHSHTSSTH----HPEVTSTSTT 1767
Query: 508 G-SYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLM 566
+ N+ S G + P + H T+ + P+ S +P S P
Sbjct: 1768 SITPNHTSTGTRTP---------VAHTTSATSSRLPTPFTTHSPPTG-TTPISSTGPVTA 1817
Query: 567 SS--TPRLHPTPVTPRWP---EVPSANTCYTSPSVHSARYGNSSDMYT 609
+S T +PTP P VPS +T +PS H+ + M T
Sbjct: 1818 TSFQTTTTYPTPSHPHTTLPTHVPSFSTSLVTPSTHTVIIPTHTQMAT 1865
Score = 32.7 bits (73), Expect = 1.1
Identities = 38/208 (18%), Positives = 75/208 (36%), Gaps = 20/208 (9%)
Query: 409 AAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAA 468
+ PT + P + + ++ PP + S S ++ ST A S+ S ++ ++
Sbjct: 2040 STPTGTVPPPTTLKATGSTHTAPPMTVTTSGTSQTHSSFSTATASSSFISSSSWLPQNSS 2099
Query: 469 GSPAEN--SQQLPCMRNTHVPSSSVTHRIPVY-PHREEHGYTGSYNYGSYGNQHPHPMQS 525
P + + QLP + + P S+ + P SY + H P S
Sbjct: 2100 SRPPSSPITTQLPHLSSATTPVSTTNQLSSSFSPSPSAPSTVSSY----VPSSHSSPQTS 2155
Query: 526 QYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVP 585
+ +S P+H ++ S +S+ P +P +P P
Sbjct: 2156 SPSVGTSSSFVSAPVH-------------STTLSSGSHSSLSTHPTTASVSASPLFPSSP 2202
Query: 586 SANTCYTSPSVHSARYGNSSDMYTPLTT 613
+A+T + H+ + P++T
Sbjct: 2203 AASTTIRATLPHTISSPFTLSALLPIST 2230
Score = 31.6 bits (70), Expect = 2.4
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 14/96 (14%)
Query: 402 EIILTEAAAPTPSPVPS-----FSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSY 456
E+ T TP+P + + SATS PPP + +P + S+TG M +
Sbjct: 1536 EVTPTSTTTITPNPTSTRTRTPVAHTNSATSSRPPPPFT-THSPPTGSSPFSSTGPMTAT 1594
Query: 457 TWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVT 492
++ T T T P+ LP THVP S +
Sbjct: 1595 SFKTTTTYPT----PSHPQTTLP----THVPPFSTS 1622
>gi|37595553 ring finger protein 111 [Homo sapiens]
Length = 986
Score = 42.7 bits (99), Expect = 0.001
Identities = 55/232 (23%), Positives = 87/232 (37%), Gaps = 30/232 (12%)
Query: 396 TAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTG-AMQ 454
T R E T A+ +P S + +A++V PS+ VS S T STTG ++
Sbjct: 397 TTSARMESQATSASINNSNPSTSEQASDTASAVTSSQPST-VSETSATLTSNSTTGTSIG 455
Query: 455 SYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHR---EEHGYTGSYN 511
+ T + T G PA C +++ SS H +PH ++HG+
Sbjct: 456 DDSRRTTSSAVTETGPPAMPRLPSCCPQHSPCGGSSQNHHALGHPHTSCFQQHGH----- 510
Query: 512 YGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPC--LMSST 569
+ H H + +PA+P + S P P P PC SS
Sbjct: 511 ---HFQHHHHHHHTPHPAVPVSPSFSDP-----------ACPVERPPQVQAPCGANSSSG 556
Query: 570 PRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEH 621
H P V +N+ S S ++ D P+++ R + + H
Sbjct: 557 TSYHEQQALP----VDLSNSGIRSHGSGSFHGASAFDPCCPVSSSRAAIFGH 604
>gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Homo
sapiens]
Length = 753
Score = 40.8 bits (94), Expect = 0.004
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 12/169 (7%)
Query: 398 EVREEIILTEAAAPTPSPVPSFSPA-KSATSVEVPPPSSPV--SNPSPEYTGLSTTGAMQ 454
E I L A +PSPV F P+ SA V V PS PV + P +TG S T Q
Sbjct: 464 ETSPAIQLPTPAVQSPSPVTLFQPSVSSAAQVAVQDPSLPVYPALPPQRFTGPSQTDTHQ 523
Query: 455 SYTWSLTYTVTTAAGSPAENSQQLPCMRNT-HVPSSSVTHRIPVYPHREEHGYTGSYNYG 513
++ T+TV E++ ++ +T H ++ T + P RE +
Sbjct: 524 LHS-EATHTVKQPTPVSLESANRISSSASTAHARFATST----IQPPREYSSVSPCPRSA 578
Query: 514 --SYGNQHPHPMQSQYPALPHDTAISG-PLHYAPYHRSSAQYPFNSPTS 559
+ PHP Q P L H + G P ++ +H P P+S
Sbjct: 579 PIPQASPIPHPHVYQPPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSS 627
>gi|109637784 GLIS family zinc finger 3 isoform a [Homo sapiens]
Length = 930
Score = 39.7 bits (91), Expect = 0.009
Identities = 55/216 (25%), Positives = 74/216 (34%), Gaps = 28/216 (12%)
Query: 406 TEAAAPTPSP----VPSFSP---AKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTW 458
T +P P P P FS ++S T+ PP PVS+PSP G + G+ + +
Sbjct: 696 TVGRSPGPGPDLYSAPIFSSNYSSRSGTAAGAVPPPHPVSHPSP---GHNVQGSPHNPSS 752
Query: 459 SLTYTVTTAAG----SPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGS 514
L AG +P+ S R PSS + P Y + + SY
Sbjct: 753 QLPPLTAVDAGAERFAPSAPSPHHISPRRVPAPSSILQRTQPPYTQQPSGSHLKSY---- 808
Query: 515 YGNQHPHPMQSQYPALPHDTAISG------PLHYAPYHRSSAQYPFNSPTSRMEPCLMSS 568
P S P H G P HY R S E CL+ +
Sbjct: 809 ----QPETNSSFQPNGIHVHGFYGQLQKFCPPHYPDSQRIVPPVSSCSVVPSFEDCLVPT 864
Query: 569 TPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNS 604
+ V R S T Y PS S+ +G S
Sbjct: 865 SMGQASFDVFHRAFSTHSGITVYDLPSSSSSLFGES 900
>gi|109637782 GLIS family zinc finger 3 isoform b [Homo sapiens]
Length = 775
Score = 39.7 bits (91), Expect = 0.009
Identities = 55/216 (25%), Positives = 74/216 (34%), Gaps = 28/216 (12%)
Query: 406 TEAAAPTPSP----VPSFSP---AKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTW 458
T +P P P P FS ++S T+ PP PVS+PSP G + G+ + +
Sbjct: 541 TVGRSPGPGPDLYSAPIFSSNYSSRSGTAAGAVPPPHPVSHPSP---GHNVQGSPHNPSS 597
Query: 459 SLTYTVTTAAG----SPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGS 514
L AG +P+ S R PSS + P Y + + SY
Sbjct: 598 QLPPLTAVDAGAERFAPSAPSPHHISPRRVPAPSSILQRTQPPYTQQPSGSHLKSY---- 653
Query: 515 YGNQHPHPMQSQYPALPHDTAISG------PLHYAPYHRSSAQYPFNSPTSRMEPCLMSS 568
P S P H G P HY R S E CL+ +
Sbjct: 654 ----QPETNSSFQPNGIHVHGFYGQLQKFCPPHYPDSQRIVPPVSSCSVVPSFEDCLVPT 709
Query: 569 TPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNS 604
+ V R S T Y PS S+ +G S
Sbjct: 710 SMGQASFDVFHRAFSTHSGITVYDLPSSSSSLFGES 745
>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 280
Score = 38.9 bits (89), Expect = 0.015
Identities = 60/218 (27%), Positives = 82/218 (37%), Gaps = 21/218 (9%)
Query: 405 LTEAAAPT--PSPVPSFSPAKSATSVEVPPPSSPVSNPS--PEYTGLSTTGAMQSYTWSL 460
LT ++ PT PS P+ +P + T + P S+P PS P T ST S T +L
Sbjct: 54 LTPSSPPTLTPSNTPTLTPCSTPT---LTPCSTPTLTPSNTPTLTPSSTPTLTPSSTPTL 110
Query: 461 TYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHP 520
T + T +P+ P T PSS+ P T S + P
Sbjct: 111 TPSSTPTL-TPSSTPTLTPSSTPTLTPSST-----PTLTRSSTPTLTPSSTPTLTPSSTP 164
Query: 521 HPMQSQYPAL-PHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHP----T 575
S P L P T P RSS S T + P SSTP L P T
Sbjct: 165 TLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTP---SSTPTLTPSNTPT 221
Query: 576 PVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 613
+ P + ++T +PS +S+ TP +T
Sbjct: 222 LIPSSTPTLTPSSTPTLTPSSRPTLTRSSTPTLTPSST 259
Score = 34.3 bits (77), Expect = 0.36
Identities = 47/177 (26%), Positives = 68/177 (38%), Gaps = 11/177 (6%)
Query: 406 TEAAAPTPSPVPSFSPAKSATSV-EVPPPSSPVSNPS--PEYTGLSTTGAMQSYTWSLTY 462
T + TP+ PS +P + +S + P S+P PS P T ST +S T +LT
Sbjct: 93 TLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTRSSTPTLTP 152
Query: 463 TVT---TAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQH 519
+ T T + +P P + + P+ + + R P+ T S +
Sbjct: 153 SSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSR-PILTRSSTPTLTPSSTPTLTPSST 211
Query: 520 PHPMQSQYPAL-PHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPT 575
P S P L P T P SS S T + P SSTP L P+
Sbjct: 212 PTLTPSNTPTLIPSSTPTLTPSSTPTLTPSSRPTLTRSSTPTLTP---SSTPTLTPS 265
Score = 31.6 bits (70), Expect = 2.4
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 395 STAEVREEIILTEAAAPTPSPVPSFSPAKSATSV-EVPPPSSPVSNPS--PEYTGLSTTG 451
ST + T + TP+ PS +P + +S + P S+P PS P T ST
Sbjct: 138 STPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPT 197
Query: 452 AMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVT 492
S T +LT + +T +P+ +P T PSS+ T
Sbjct: 198 LTPSSTPTLTPS-STPTLTPSNTPTLIPSSTPTLTPSSTPT 237
>gi|167736355 mucin 4 isoform a [Homo sapiens]
Length = 5284
Score = 38.9 bits (89), Expect = 0.015
Identities = 67/244 (27%), Positives = 94/244 (38%), Gaps = 39/244 (15%)
Query: 412 TPSPVPSFSPAKS--ATSVEVPPPSS---------PVSNPSPEYTGLST----TGAMQSY 456
TP PV S A + AT + V PSS PV++PS TG +T TG +
Sbjct: 3695 TPLPVTDASSASTGHATPLPVTIPSSVSTGDTMPLPVTSPSSASTGHATPLPVTGLSSAS 3754
Query: 457 TWSLT-YTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSY 515
T T VT + + ++ LP + +T S+ T R+PV + S
Sbjct: 3755 TGDTTPLPVTDTSSASTRHATPLP-VTDTSSASTDDTTRLPV----------TDVSSAST 3803
Query: 516 GNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSP-TSRMEPCLMSSTPRLHP 574
G+ P P+ S A DT PL S + + P TSR +ST P
Sbjct: 3804 GHATPLPVTSTSSASTGDTT---PLPVTDTSSVSTGHATSLPVTSRSS----ASTGHATP 3856
Query: 575 TPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGE 634
PVT + S +T + +P ++ S+ TPL S P
Sbjct: 3857 LPVT----DTSSVSTGHATPLPVTSTSSVSTGHATPLPVTSPSSASTGHATPVPVTSTSS 3912
Query: 635 ASTG 638
ASTG
Sbjct: 3913 ASTG 3916
Score = 37.4 bits (85), Expect = 0.043
Identities = 60/246 (24%), Positives = 90/246 (36%), Gaps = 23/246 (9%)
Query: 405 LTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTG----LSTTGAMQSYTWSL 460
L+ A+ P+P SP+ ++T P P + S+ S +T S + A +T L
Sbjct: 1526 LSSASTGDTMPLPVTSPSSASTGDTTPLPVTDASSVSTGHTTPLPVTSPSSASTGHTTPL 1585
Query: 461 TYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGS------YNYGS 514
T T++A ++ LP T S+S H P+ TG N S
Sbjct: 1586 PVTDTSSASK--GDTTPLPV---TSPSSASTGHTTPLPVTDTSSASTGDTTPLPVTNASS 1640
Query: 515 YGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHP 574
H P+ P+ T + PL +S + P + + T RL
Sbjct: 1641 LSTGHATPLHVTSPS-SASTGHATPLPVTSTSSASTGHATPLPVTGLSSATTDDTTRL-- 1697
Query: 575 TPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGE 634
PVT +V SA+T +P ++ S+ TPL S P
Sbjct: 1698 -PVT----DVSSASTGQATPLPVTSLSSVSTGDTTPLPVTSPSSASTGHASPLLVTDASS 1752
Query: 635 ASTGWA 640
ASTG A
Sbjct: 1753 ASTGQA 1758
Score = 36.2 bits (82), Expect = 0.096
Identities = 62/252 (24%), Positives = 94/252 (37%), Gaps = 39/252 (15%)
Query: 412 TPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAG 469
TP PV S + ATS+ V PS+ + + T+ A SL T T++
Sbjct: 1215 TPLPVTDASSVSTDHATSLPVTIPSAASTGHTTPLPVTDTSSASTGQATSLLVTDTSSVS 1274
Query: 470 SPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTG--------SYNYGSYGNQHPH 521
+ ++ LP T S+S H P++ TG S + S G+ P
Sbjct: 1275 T--GDTTPLPV---TSTSSASTGHVTPLHVTSPSSASTGHATPLPVTSLSSASTGDTMPL 1329
Query: 522 PMQSQYPALPHDTAISGPL-----------HYAPYHRSSAQYPFNSPTSRMEPCLMSSTP 570
P+ S A DT PL H P H + A + + +SS
Sbjct: 1330 PVTSPSSASTGDTT---PLPVTDASSVSTGHTTPLHVTDASSASTGQATPLPVTSLSSVS 1386
Query: 571 RLHPTPVTPRWPEVPSANTCYTSP----SVHSARYGNSSDMYTPLTTRRNSEYEHMQHFP 626
TP+ P SA+T + +P SA G+++ + P+T + +H P
Sbjct: 1387 TGDTTPLPVTSPS--SASTGHATPLLVTDTSSASTGHATPL--PVTDASSVSTDHATSLP 1442
Query: 627 GFAYINGEASTG 638
I ASTG
Sbjct: 1443 --VTIPSAASTG 1452
Score = 33.9 bits (76), Expect = 0.47
Identities = 63/251 (25%), Positives = 90/251 (35%), Gaps = 33/251 (13%)
Query: 412 TPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAG 469
TP PV S + ATS+ V PS+ + + T+ A SL T T++
Sbjct: 1423 TPLPVTDASSVSTDHATSLPVTIPSAASTGHTTPLPVTDTSSASTGQATSLLVTDTSSVS 1482
Query: 470 SPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTG--------SYNYGSYGNQHPH 521
+ ++ LP T S+S H P++ TG S + S G+ P
Sbjct: 1483 T--GDTTPLPV---TSTSSASTGHVTPLHVTSPSSASTGHATPLPVTSLSSASTGDTMPL 1537
Query: 522 PMQSQYPALPHDTAISGPL-----------HYAPYHRSSAQYPFNSPTSRMEPCLMSSTP 570
P+ S A DT PL H P +S P ++ T P ++ T
Sbjct: 1538 PVTSPSSASTGDTT---PLPVTDASSVSTGHTTPLPVTS---PSSASTGHTTPLPVTDTS 1591
Query: 571 RLHPTPVTPRWPEVP-SANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFA 629
TP P SA+T +T+P + S+ TPL S P
Sbjct: 1592 SASKGDTTPLPVTSPSSASTGHTTPLPVTDTSSASTGDTTPLPVTNASSLSTGHATPLHV 1651
Query: 630 YINGEASTGWA 640
ASTG A
Sbjct: 1652 TSPSSASTGHA 1662
Score = 33.5 bits (75), Expect = 0.62
Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 49/235 (20%)
Query: 412 TPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAG 469
TP PV S A + ATS+ V SS + + T+ A + L T T++A
Sbjct: 2815 TPLPVTDTSSASTGHATSLPVTDTSSASTGHATPLPDTDTSSASTGHATLLPVTDTSSAS 2874
Query: 470 SPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQSQYPA 529
++ LP T S S H P+ + S + S G+ P P+
Sbjct: 2875 --IGHATSLPV---TDTSSISTGHATPL--------HVTSPSSASTGHATPLPVT----- 2916
Query: 530 LPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVPSANT 589
DT+ + H P H SP+S +ST P PVT + SA+T
Sbjct: 2917 ---DTSSASTGHANPLH-------VTSPSS-------ASTGHATPLPVT----DTSSAST 2955
Query: 590 CYTSP----SVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGEASTGWA 640
+ +P S+ S G+++ + P+T+ ++ H P ASTG A
Sbjct: 2956 GHATPLPVTSLSSVSTGDTTPL--PVTSPSSASTGHTTPLP--VTDTSSASTGQA 3006
Score = 33.5 bits (75), Expect = 0.62
Identities = 65/253 (25%), Positives = 94/253 (37%), Gaps = 43/253 (16%)
Query: 404 ILTEAAAPTPSPVPSFSPAKSATSVEVPPPSS---------PVSNPSPEYTG----LSTT 450
+ T P P PS + ATS+ V SS PV++ S YTG L T
Sbjct: 3097 VSTGDTTPLPVTSPSSASTGHATSLPVTDTSSASTGDTTSLPVTDTSSAYTGDTTSLPVT 3156
Query: 451 GAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSY 510
S T T + T S P + T S+S H P+ + S
Sbjct: 3157 DTSSSSTGDTTPLLVTETSS-VSTGHATPLL-VTDASSASTGHATPL--------HVTSP 3206
Query: 511 NYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMS--S 568
+ S G+ P P+ DT+ H P + T+R+ +S S
Sbjct: 3207 SSASTGDTTPVPVT--------DTSSVSTGHATPLPVTGLSSASTGDTTRLPVTDISSAS 3258
Query: 569 TPRLHPTPVTPRWPEVPSANTC---YTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHF 625
T + P PVT V + +T TSPS SA G+++ + P+T+ ++ H
Sbjct: 3259 TGQATPLPVT-NTSSVSTGDTMPLPVTSPS--SASTGHATPL--PVTSTSSASTGHATPV 3313
Query: 626 PGFAYINGEASTG 638
P ASTG
Sbjct: 3314 P--VTSTSSASTG 3324
Score = 32.7 bits (73), Expect = 1.1
Identities = 57/237 (24%), Positives = 96/237 (40%), Gaps = 43/237 (18%)
Query: 414 SPVPSFSPAKSATSVEVPPPSSPVSNPSPEY-TGL---STTGAMQSYTWSLTYTVTTAAG 469
+P+P SP+ ++T P P + S+ S + T L T+ A + SL T T++A
Sbjct: 2127 TPLPVTSPSSASTGDTTPLPVTDTSSVSTGHATSLPVTDTSSASTGHATSLPVTDTSSAS 2186
Query: 470 ------------SPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTG--------S 509
S A Q P + T S+S H IP+ TG S
Sbjct: 2187 TGHATPLPVTDTSSASTGQATP-LPVTSPSSASTGHAIPLLVTDTSSASTGQATPLPVTS 2245
Query: 510 YNYGSYGNQHPHPM-QSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSS 568
+ S G+ P P+ + + H T++ + + P SP+S +S
Sbjct: 2246 LSSASTGDTTPLPVTDASSVSTGHATSLPVTSLSSVSTGDTTPLPVTSPSS-------AS 2298
Query: 569 TPRLHPTPVTPRWPEVPSANTCYTSP----SVHSARYGNSSDMYTPLTTRRNSEYEH 621
T P VT + SA+T + +P S+ SA G+++ + P+T+ ++ H
Sbjct: 2299 TGHATPLHVT----DASSASTGHATPLPVTSLSSASTGDTTPL--PVTSPSSASTGH 2349
Score = 32.0 bits (71), Expect = 1.8
Identities = 55/240 (22%), Positives = 91/240 (37%), Gaps = 37/240 (15%)
Query: 405 LTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSP-EYTGL---STTGAMQSYTWSL 460
L+ + +P+P SP+ ++T P P + S+ S + T L ST+ A T L
Sbjct: 2966 LSSVSTGDTTPLPVTSPSSASTGHTTPLPVTDTSSASTGQATALPVTSTSSASTGDTTPL 3025
Query: 461 TYTVTTAAGS------PAENSQQLPCMRNTHVP-----SSSVTHRIPVYPHREEHGYTG- 508
T T++A + P + + T +P S+S H P+ TG
Sbjct: 3026 PVTDTSSASTGQATPLPVTSLSSVSTGDTTPLPVTSPSSASTGHATPLLVTDASSASTGQ 3085
Query: 509 -------SYNYGSYGNQHPHPMQS----------QYPALPHDTAISGPLHYAPYHRSSAQ 551
S + S G+ P P+ S P +A +G P +S+
Sbjct: 3086 ATPLPVTSLSSVSTGDTTPLPVTSPSSASTGHATSLPVTDTSSASTGDTTSLPVTDTSSA 3145
Query: 552 YPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPL 611
Y ++ + + SST P VT E S +T + +P + + S+ TPL
Sbjct: 3146 YTGDTTSLPVTDTSSSSTGDTTPLLVT----ETSSVSTGHATPLLVTDASSASTGHATPL 3201
Score = 31.2 bits (69), Expect = 3.1
Identities = 66/282 (23%), Positives = 94/282 (33%), Gaps = 35/282 (12%)
Query: 380 QERANELMRAMKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSN 439
QE A A T+ + I L A T S VP P S TS + P +
Sbjct: 899 QETAAISRMAQTQRTRTSRGSDTISLASQATDTFSTVPPTPP--SITSTGLTSPQTETHT 956
Query: 440 PSPEYTGLSTTGAMQSYTWSLTYT--------------VTTAAGSPAENSQQLPCMRNTH 485
SP +G + T A+ S L T VT A+ ++ LP +
Sbjct: 957 LSPSGSGKTFTTALISNATPLPVTYASSASTGHTTPLHVTDASSVSTGHATPLPVTSPSS 1016
Query: 486 VPSSSVTHRIPVYPHREEHGY-----TGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPL 540
V + T E G+ S++ S G+ P P+ DT+ +
Sbjct: 1017 VSTGHTTPLPVTDTSSESTGHVTPLPVTSFSSASTGDSTPLPVT--------DTSSASTG 1068
Query: 541 HYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPT--PVTPRWPEVPSANTCYTSPSVHS 598
H P +S T+ + SS H T PVT + S +T +T+P +
Sbjct: 1069 HVTPLPVTSLSSASTGDTTPLPVTDTSSASTGHATSLPVT----DTSSVSTGHTTPLPVT 1124
Query: 599 ARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGEASTGWA 640
S+ T L S P ASTG A
Sbjct: 1125 DTSSASTGHATSLPVTDTSSVSTGHTTPLHVTDASSASTGQA 1166
Score = 31.2 bits (69), Expect = 3.1
Identities = 54/239 (22%), Positives = 88/239 (36%), Gaps = 13/239 (5%)
Query: 405 LTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEY-TGLSTTGAMQSYTWSLT-Y 462
++ A+ +P+P S + ++T P P + S+ S + T L T A T T
Sbjct: 2438 VSSASTGHATPLPVTSTSSASTGDTTPLPGTDTSSVSTGHTTPLLVTDASSVSTGDTTRL 2497
Query: 463 TVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHP 522
VT+ + + ++ LP T PS+S P+ P + + +
Sbjct: 2498 PVTSPSSASTGHTTPLPV---TDTPSASTGDTTPL-PVTNASSLSTRHATSLHVTSPSSA 2553
Query: 523 MQSQYPALP-HDTAISGPLHYAPYHRSSAQYPFNSPTSRM--EPCLMSSTPRLHPTPVTP 579
+LP DT+ + H P +S T+ + +ST + P PVT
Sbjct: 2554 STGHATSLPVTDTSAASTGHATPLPVTSTSSASTGDTTPLPVTDTYSASTGQATPLPVT- 2612
Query: 580 RWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGEASTG 638
+ SA+T T+P + S+ TPL S P ASTG
Sbjct: 2613 ---DTSSASTGDTTPLPVTDTSSASTGHATPLPVTNTSSVSTGHATPLHVTSPSSASTG 2668
Score = 30.4 bits (67), Expect = 5.2
Identities = 54/237 (22%), Positives = 83/237 (35%), Gaps = 21/237 (8%)
Query: 405 LTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSP-EYTGLSTTGAMQSYTWSLTYT 463
L+ A+ +P+P + ++T + P P + +S+ S + T L T + T T
Sbjct: 2022 LSSASTGDTTPLPVTDTSSASTGQDTPLPVTSLSSVSTGDTTPLPVTSPSSASTGHATPL 2081
Query: 464 VTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPM 523
+ T A S + H S VT V + + S G+ P P+
Sbjct: 2082 LVTDASS----------VSTGHATSLLVTDASSVSTGHATALHVTDASSLSTGDTTPLPV 2131
Query: 524 QSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPE 583
S A DT PL S + + P + +ST PVT +
Sbjct: 2132 TSPSSASTGDTT---PLPVTDTSSVSTGHATSLPVTDTS---SASTGHATSLPVT----D 2181
Query: 584 VPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGEASTGWA 640
SA+T + +P + S+ TPL S P ASTG A
Sbjct: 2182 TSSASTGHATPLPVTDTSSASTGQATPLPVTSPSSASTGHAIPLLVTDTSSASTGQA 2238
>gi|20070107 orthodenticle homeobox 1 [Homo sapiens]
Length = 354
Score = 38.5 bits (88), Expect = 0.019
Identities = 45/195 (23%), Positives = 66/195 (33%), Gaps = 26/195 (13%)
Query: 383 ANELMRAMKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSP 442
AN A G G + T AA+ SP S SP + SV VP P + SN S
Sbjct: 147 ANPAAAAAAGLGGNPVAAASSLSTPAASSIWSPA-SISPGSAPASVSVPEPLAAPSNTSC 205
Query: 443 EYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSV-------THRI 495
++ A + ++ ++Y G Q P PSSS ++
Sbjct: 206 MQRSVAAGAATAAASYPMSY------GQGGSYGQGYP------TPSSSYFGGVDCSSYLA 253
Query: 496 PVYPHREEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFN 555
P++ H H + G+ H HP H + S H+ +H Y +
Sbjct: 254 PMHSHHHPHQLSPMAPSSMAGHHHHHPHAH------HPLSQSSGHHHHHHHHHHQGYGGS 307
Query: 556 SPTSRMEPCLMSSTP 570
CL P
Sbjct: 308 GLAFNSADCLDYKEP 322
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 38.5 bits (88), Expect = 0.019
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 21/215 (9%)
Query: 403 IILTEAAAPTPSPVPSFSPAKSATSV-EVPPPSSPVSNPSPEYTGLST--TGAMQSYTWS 459
+ + EA+ + +PV S SP ++T V P P+ S P Y+ ST TG S T
Sbjct: 3058 VAIPEASTLSTTPVDSNSPVVTSTEVSSSPTPAEGTSMPISTYSEGSTPLTGVPVSTTPV 3117
Query: 460 LTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQH 519
+ ++T + +P + S P +T SS T P T + + GS +
Sbjct: 3118 TSSAISTLSTTPVDTS--TPVTTSTEAHSSPTTSEGTSMP-------TSTPSEGSTPLTY 3168
Query: 520 PHPMQSQYPALPHDTAISG-PLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVT 578
P+ + D+ +S P+ + +S + S T+ + +STP TP+T
Sbjct: 3169 -MPVSTMLVVSSEDSTLSATPVDTSTPVTTSTE--ATSSTTAEGTSIPTSTPSEGMTPLT 3225
Query: 579 PRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 613
VP +NT S S S D TPLTT
Sbjct: 3226 ----SVPVSNTPVAS-SEASILSTTPVDSNTPLTT 3255
Score = 35.0 bits (79), Expect = 0.21
Identities = 57/213 (26%), Positives = 86/213 (40%), Gaps = 24/213 (11%)
Query: 407 EAAAPTPSPVPSFSPAKSATSV-EVPPPSSPVSNPSPEYTGLST--TGAMQSYTWSLTYT 463
EA+ + +PV S SP ++T V P P+ S P+ Y+ T T S T T
Sbjct: 822 EASTLSTTPVDSNSPVTTSTEVSSSPTPAEGTSMPTSTYSEGRTPLTSMPVSTTLVATSA 881
Query: 464 VTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPM 523
++T + +P + S P +T SS T P GS S + +
Sbjct: 882 ISTLSTTPVDTS--TPVTNSTEARSSPTTSEGTSMPTSTPG--EGSTPLTSMPDSTTPVV 937
Query: 524 QSQ---YPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPR 580
S+ A P DT S P+ +++ +SPT+ + +STP TP+T
Sbjct: 938 SSEARTLSATPVDT--STPV-------TTSTEATSSPTTAEGTSIPTSTPSEGTTPLT-- 986
Query: 581 WPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 613
P ++T + S S D TPLTT
Sbjct: 987 --STPVSHTLVAN-SEASTLSTTPVDSNTPLTT 1016
Score = 34.3 bits (77), Expect = 0.36
Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 22/218 (10%)
Query: 406 TEAAAPTPSPVPSFSPAKSATSVEVPPP-----SSPVSNPSPEYTGLSTTGAMQSYTWSL 460
+EA+ + +PV S +P ++T PPP S P S PS T L T S T
Sbjct: 998 SEASTLSTTPVDSNTPLTTSTEASSPPPTAEGTSMPTSTPSEGSTPL--TRMPVSTTMVA 1055
Query: 461 TYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHP 520
+ +T + +PA+ S P + SSS T P T +Y+ GS
Sbjct: 1056 SSETSTLSTTPADTS--TPVTTYSQASSSSTTADGTSMP-------TSTYSEGSTPLTSV 1106
Query: 521 HPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPR-----LHPT 575
P+ ++ + +S +++ +SPT+ + +S P L
Sbjct: 1107 -PVSTRLVVSSEASTLSTTPVDTSIPVTTSTEASSSPTTAEGTSIPTSPPSEGTTPLASM 1165
Query: 576 PVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 613
PV+ ANT T+P + S++ +P T
Sbjct: 1166 PVSTTLVVSSEANTLSTTPVDSKTQVATSTEASSPPPT 1203
Score = 33.1 bits (74), Expect = 0.81
Identities = 46/207 (22%), Positives = 77/207 (37%), Gaps = 25/207 (12%)
Query: 404 ILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYT 463
++TE + P + +P S+T+ P + VS P T L+T S T + +++
Sbjct: 3928 VITEGSTPGTTIFIPSTPVTSSTADVFPATTGAVSTPVITSTELNTPSTSSSST-TTSFS 3986
Query: 464 VTTAAGSPAENSQQLPCMRNTHVPSSSVT-HRIPVYPHREEHGYTGSYN-YGSYGNQHPH 521
T +PA T P + VT P P G T S + + H
Sbjct: 3987 TTKEFTTPA---------MTTAAPLTYVTMSTAPSTPRTTSRGCTTSASTLSATSTPHTS 4037
Query: 522 PMQSQYPALPHD--------TAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLH 573
+ P P T+ + P + P H S+ S T+ + + T R
Sbjct: 4038 TSVTTRPVTPSSESSRPSTITSHTIPPTFPPAHSSTPPTTSASSTTVNPEAVTTMTTRTK 4097
Query: 574 PTPVTPRWP-----EVPSANTCYTSPS 595
P+ T +P VP+ T ++P+
Sbjct: 4098 PSTRTTSFPTVTTTAVPTNTTIKSNPT 4124
Score = 32.3 bits (72), Expect = 1.4
Identities = 51/210 (24%), Positives = 75/210 (35%), Gaps = 47/210 (22%)
Query: 407 EAAAPTPSPVPSFSPAKSATSV-EVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVT 465
EA+ + +PV S SP ++T V P P+ S P+ YT T S+T T
Sbjct: 1647 EASTLSTTPVDSNSPVITSTEVSSSPTPAEGTSMPTSTYTEGRTP------LTSITVRTT 1700
Query: 466 TAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQS 525
A S P +T V +S+ P S
Sbjct: 1701 PVASSAISTLSTTPVDNSTPVTTST--------------------------EARSSPTTS 1734
Query: 526 QYPALPHDTAISG--PLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPE 583
+ ++P+ T G PL P +P E +S+TP TPVT E
Sbjct: 1735 EGTSMPNSTPSEGTTPLTSIPVS--------TTPVLSSEASTLSATPIDTSTPVTTS-TE 1785
Query: 584 VPSANTCYTSPSVHSARYGNSSDMYTPLTT 613
S+ T S+ ++ S+ TPLT+
Sbjct: 1786 ATSSPTTAEGTSIPTS---TLSEGMTPLTS 1812
Score = 32.3 bits (72), Expect = 1.4
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 406 TEAAAPTPSPVPSFSPAKSATSVEVPPP-----SSPVSNPSPEYTGL-----STTGAMQS 455
+EA+ + +PV S +P ++T PP S P S PS T L STT S
Sbjct: 3237 SEASILSTTPVDSNTPLTTSTEASSSPPTAEGTSMPTSTPSEGSTPLTSMPVSTTTVASS 3296
Query: 456 YTWSLTYT---VTTAAGSPAENSQQLPCMRNTHVPSSS 490
T +L+ T +T + ++ S P T +P+S+
Sbjct: 3297 ETSTLSTTPADTSTPVTTYSQASSSPPIADGTSMPTST 3334
Score = 32.0 bits (71), Expect = 1.8
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Query: 403 IILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTY 462
++ +EA + +PV S + ++T PPP++ V++ ST G + S+
Sbjct: 1172 VVSSEANTLSTTPVDSKTQVATSTEASSPPPTAEVTS-----MPTSTPGERSTPLTSMPV 1226
Query: 463 TVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIP 496
T A S A P +T V +S+ T P
Sbjct: 1227 RHTPVASSEASTLSTSPVDTSTPVTTSAETSSSP 1260
Score = 30.4 bits (67), Expect = 5.2
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 15/96 (15%)
Query: 406 TEAAAPTPSPVPSFSPAKSATSVEVPP-----PSSPVSNPSPEYTGLSTTGAMQSYTWSL 460
+EA+ + +PV S SP ++T+V P S +S PS T L+ S+
Sbjct: 1470 SEASTLSTTPVDSNSPVVTSTAVSSSPTPAEGTSIAISTPSEGSTALT----------SI 1519
Query: 461 TYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIP 496
+ TT A S + P + +T V + S P
Sbjct: 1520 PVSTTTVASSEINSLSTTPAVTSTPVTTYSQASSSP 1555
Score = 30.4 bits (67), Expect = 5.2
Identities = 56/224 (25%), Positives = 87/224 (38%), Gaps = 34/224 (15%)
Query: 406 TEA-AAPTPSP---VPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLT 461
TEA ++PT S +P+ +P++ +T P S PVS + ST A T +
Sbjct: 2196 TEARSSPTTSEGTSMPTSTPSEGST----PFTSMPVSTMPVVTSEASTLSATPVDTSTPV 2251
Query: 462 YTVTTAAGSPAENSQQLPCMRNTHVPSSSVTH-RIPVYPHREEHGYTGSYNYGSYGNQHP 520
T T A SP T +P+S+++ P+ H + +
Sbjct: 2252 TTSTEATSSPT-------TAEGTSIPTSTLSEGTTPLTSIPVSHTLVANSEVSTLSTT-- 2302
Query: 521 HPMQSQYPALPHDTAIS-GPLHYAPYHRSSAQYPFNSPTSRM----------EPCLMSST 569
P+ S P A S P +S N+P +RM E +S+T
Sbjct: 2303 -PVDSNTPFTTSTEASSPPPTAEGTSMPTSTSSEGNTPLTRMPVSTTMVASFETSTLSTT 2361
Query: 570 PRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 613
P TPVT + + S+ T S+ ++ Y S TPLT+
Sbjct: 2362 PADTSTPVT-TYSQAGSSPTTADDTSMPTSTYSEGS---TPLTS 2401
Score = 30.4 bits (67), Expect = 5.2
Identities = 47/211 (22%), Positives = 76/211 (36%), Gaps = 18/211 (8%)
Query: 406 TEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSN---PSPEYTGLSTTGAMQSYTWSLTY 462
TEA++P P+ + P +++ P PVS S E + LSTT A S
Sbjct: 2314 TEASSPPPTAEGTSMPTSTSSEGNTPLTRMPVSTTMVASFETSTLSTTPA----DTSTPV 2369
Query: 463 TVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHP 522
T + AGS + +T+ S+ +PV +++ P
Sbjct: 2370 TTYSQAGSSPTTADDTSMPTSTYSEGSTPLTSVPVSTMPVVSSEASTHSTTPVDTSTPVT 2429
Query: 523 MQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWP 582
++ + P TA + +P S P S P + S L TPV P
Sbjct: 2430 TSTEASSSP-TTAEGTSIPTSP--PSEGTTPLASMPVSTTPVVSSEAGTLSTTPVDTSTP 2486
Query: 583 EVPSANTCYTSPSVHSARYGNSSDMYTPLTT 613
S +SP+ + D+ P++T
Sbjct: 2487 MTTSTEAS-SSPT-------TAEDIVVPIST 2509
Score = 30.0 bits (66), Expect = 6.8
Identities = 53/225 (23%), Positives = 77/225 (34%), Gaps = 46/225 (20%)
Query: 406 TEAAAPTPSPVPSFSPAKSATSVEVPPP-----SSPVSNPSPEYTGLSTTGAMQSYTWSL 460
+E + + +PV S +P ++T PPP S P S S T L T S T
Sbjct: 2294 SEVSTLSTTPVDSNTPFTTSTEASSPPPTAEGTSMPTSTSSEGNTPL--TRMPVSTTMVA 2351
Query: 461 TYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHP 520
++ +T + +PA+ S P + SS T P T +Y+ GS
Sbjct: 2352 SFETSTLSTTPADTS--TPVTTYSQAGSSPTTADDTSMP-------TSTYSEGS------ 2396
Query: 521 HPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPV--- 577
S P+ P S A +P P S+ PT
Sbjct: 2397 ------------TPLTSVPVSTMPVVSSEASTHSTTPVDTSTPVTTSTEASSSPTTAEGT 2444
Query: 578 -----TPRWPEVPSANTCYTSPSVHSARYGNSS----DMYTPLTT 613
P P A+ ++ V S+ G S D TP+TT
Sbjct: 2445 SIPTSPPSEGTTPLASMPVSTTPVVSSEAGTLSTTPVDTSTPMTT 2489
Score = 30.0 bits (66), Expect = 6.8
Identities = 62/255 (24%), Positives = 96/255 (37%), Gaps = 53/255 (20%)
Query: 403 IILTEAAAPTPSPVPSFSPAKSATSVEVPPPSS-----PVSNPSPEYTGL-----STTGA 452
++ +EA+ + +PV + +P ++T + P ++ P S+PS T L STT
Sbjct: 3352 VVSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMPVSTTPV 3411
Query: 453 MQSYTWSLTYT-------VTT---AAGSP-------------AENSQQLPCMRNTHVP-S 488
+ S +L+ T VTT A+ SP +E S L M + P +
Sbjct: 3412 VSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLSTTPVA 3471
Query: 489 SSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISG-------PLH 541
SS + P T S S P ++ ++P TA G P+
Sbjct: 3472 SSEASTLSTTPVDTSTPVTTSSPTNS------SPTTAEVTSMPTSTAGEGSTPLTNMPVS 3525
Query: 542 YAPYHRSSAQ----YPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVH 597
P S A P +S T SS+P VT PS + + +
Sbjct: 3526 TTPVASSEASTLSTTPVDSNTFVTSSSQASSSPA--TLQVTTMRMSTPSEGSSSLTTMLL 3583
Query: 598 SARYGNSSDMYTPLT 612
S+ Y SS+ TP T
Sbjct: 3584 SSTYVTSSEASTPST 3598
Score = 29.6 bits (65), Expect = 8.9
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 406 TEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSP-EYTGLSTTGAMQSYT--WSLTY 462
+EA+ + +PV S SP ++T+V S+P+P E T ++T+ + T S+
Sbjct: 1823 SEASTLSTTPVDSNSPVVTSTAVS--------SSPTPAEGTSIATSTPSEGSTALTSIPV 1874
Query: 463 TVTTAAGSPAENSQQLPCMRNTHV 486
+ TT A S P + +T V
Sbjct: 1875 STTTVASSETNTLSTTPAVTSTPV 1898
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 37.7 bits (86), Expect = 0.033
Identities = 56/226 (24%), Positives = 85/226 (37%), Gaps = 37/226 (16%)
Query: 411 PTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTW--SLTYTVTTAA 468
PT S P A +A + PPSSP + P ++ L GA +++ S + T
Sbjct: 438 PTSSQAPQKLDASAAAAPASLPPSSPAA-PIATFSLLPAGGAPTVFSFGSSSLKSSATVT 496
Query: 469 GSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYT----------GSYNYGSYG-- 516
G P S + P S +P P + T S+++GS G
Sbjct: 497 GEPPSYSSGSDSSKAAPGPGPSTFSFVP--PSKASLAPTPAASPVAPSAASFSFGSSGFK 554
Query: 517 ---NQHPHPMQS-----QYPALPHDTA---------ISGPLHYAPYHRSSAQYPFNSPTS 559
P P S P+ P T+ + P S + P + +S
Sbjct: 555 PTLESTPVPSVSAPNIAMKPSFPPSTSAVKVNLSEKFTAAATSTPVSSSQSAPPMSPFSS 614
Query: 560 RMEPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSS 605
+P +S P HPTP++ VP ++ SPS SA+ G+SS
Sbjct: 615 ASKPA--ASGPLSHPTPLSAPPSSVPLKSSVLPSPSGRSAQ-GSSS 657
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 37.7 bits (86), Expect = 0.033
Identities = 62/225 (27%), Positives = 93/225 (41%), Gaps = 21/225 (9%)
Query: 405 LTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTV 464
LT ++ PT +P P + + + T PP+ SN +P T +T S T +LT +
Sbjct: 74 LTPSSTPTLTPQPILTRSSTPTLTPSSPPTLTPSN-TPTLTPSNTPTLTPSNTPTLTPSS 132
Query: 465 T---TAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPH 521
T T + +P P + + P+ + + R P+ T S + P
Sbjct: 133 TPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSR-PILTRSSTPTLTPSSTPTLTPSSTPT 191
Query: 522 PMQSQYPAL-----PHDTAISGPLHYAPYHR---SSAQYPFNSPTSRMEPCL-MSSTPRL 572
S P L P T S P P R + + P +P+SR P L SSTP L
Sbjct: 192 LTPSSTPTLTPSSRPILTRSSTPT-LTPSSRPILTPSSTPTLTPSSR--PILTRSSTPTL 248
Query: 573 HP--TP-VTP-RWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 613
P TP +TP P + +NT +PS +S+ TP +T
Sbjct: 249 TPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSST 293
Score = 30.8 bits (68), Expect = 4.0
Identities = 59/223 (26%), Positives = 87/223 (39%), Gaps = 39/223 (17%)
Query: 406 TEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVS-NPS------PEYTGLSTTGAMQSYTW 458
T + TP+ PS P + +S PSSP + PS P T T + + T
Sbjct: 17 TLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPTLTP 76
Query: 459 SLTYTVT-----TAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYG 513
S T T+T T + +P P + ++ P+ + ++ + P
Sbjct: 77 SSTPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTP-------------- 122
Query: 514 SYGNQHPHPMQSQYPAL-PHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCL-MSSTPR 571
+ P S P L P T P RSS P +P+SR P L SSTP
Sbjct: 123 ---SNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSST--PTLTPSSR--PILTRSSTPT 175
Query: 572 LHP--TP-VTP-RWPEVPSANTCYTSPSVHSARYGNSSDMYTP 610
L P TP +TP P + ++T +PS +S+ TP
Sbjct: 176 LTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTP 218
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 37.7 bits (86), Expect = 0.033
Identities = 62/225 (27%), Positives = 93/225 (41%), Gaps = 21/225 (9%)
Query: 405 LTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTV 464
LT ++ PT +P P + + + T PP+ SN +P T +T S T +LT +
Sbjct: 74 LTPSSTPTLTPQPILTRSSTPTLTPSSPPTLTPSN-TPTLTPSNTPTLTPSNTPTLTPSS 132
Query: 465 T---TAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPH 521
T T + +P P + + P+ + + R P+ T S + P
Sbjct: 133 TPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSR-PILTRSSTPTLTPSSTPTLTPSSTPT 191
Query: 522 PMQSQYPAL-----PHDTAISGPLHYAPYHR---SSAQYPFNSPTSRMEPCL-MSSTPRL 572
S P L P T S P P R + + P +P+SR P L SSTP L
Sbjct: 192 LTPSSTPTLTPSSRPILTRSSTPT-LTPSSRPILTPSSTPTLTPSSR--PILTRSSTPTL 248
Query: 573 HP--TP-VTP-RWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 613
P TP +TP P + +NT +PS +S+ TP +T
Sbjct: 249 TPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSST 293
Score = 30.8 bits (68), Expect = 4.0
Identities = 59/223 (26%), Positives = 87/223 (39%), Gaps = 39/223 (17%)
Query: 406 TEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVS-NPS------PEYTGLSTTGAMQSYTW 458
T + TP+ PS P + +S PSSP + PS P T T + + T
Sbjct: 17 TLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPTLTP 76
Query: 459 SLTYTVT-----TAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYG 513
S T T+T T + +P P + ++ P+ + ++ + P
Sbjct: 77 SSTPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTP-------------- 122
Query: 514 SYGNQHPHPMQSQYPAL-PHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCL-MSSTPR 571
+ P S P L P T P RSS P +P+SR P L SSTP
Sbjct: 123 ---SNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSST--PTLTPSSR--PILTRSSTPT 175
Query: 572 LHP--TP-VTP-RWPEVPSANTCYTSPSVHSARYGNSSDMYTP 610
L P TP +TP P + ++T +PS +S+ TP
Sbjct: 176 LTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTP 218
>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
Length = 818
Score = 37.7 bits (86), Expect = 0.033
Identities = 55/215 (25%), Positives = 78/215 (36%), Gaps = 39/215 (18%)
Query: 407 EAAAPTPSPVPS---FSPAKSATSVEVPPPSSPVSNPSPEYTGLS-----TTGAMQSYTW 458
E AAP PSP+P SPA A S PS P PE T + + G+ Q +
Sbjct: 551 ELAAPLPSPLPEQPLDSPAAPALS-----PSGLGLQPGPERTSTTKSKELSPGSAQKGSP 605
Query: 459 SLTYTVTTAAGSP----------AENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTG 508
+ A P + + Q P ++ H V+ ++ P + G G
Sbjct: 606 GSSQGTACAGTQPGAQPGAQPGASPSPSQPPADQSPHT-LRKVSKKLAPIPPKVPFGQPG 664
Query: 509 SYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHY--APYHRSSAQYP-------FNSPTS 559
+ S G P + P+ P +S P Y A S A P F S S
Sbjct: 665 AMADQSAGQPSPVSLSPTPPSTPSPYGLSYPQGYSLASGQLSPAAAPPLASPSVFTSTLS 724
Query: 560 RMEPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSP 594
+ P TP+ P P P+ P+ N +SP
Sbjct: 725 KSRP-----TPKPRQRPTLPP-PQPPTVNLSASSP 753
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 37.4 bits (85), Expect = 0.043
Identities = 50/213 (23%), Positives = 78/213 (36%), Gaps = 28/213 (13%)
Query: 412 TPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSP 471
T PV S S S SPVS+ SP+ S T S+ T T G+
Sbjct: 5325 TTPPVEETSSVSSLMSSPAMTSPSPVSSTSPQSIPSSPLPVTALPT-SVLVTTTDVLGTT 5383
Query: 472 AENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQSQYPALP 531
+ S + ++ SS+TH P H ++
Sbjct: 5384 SPES-----VTSSPPNLSSITHERPATYKDTAHTEAAMHH-------------------S 5419
Query: 532 HDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVPSANTCY 591
+TA++ H+S + +S TS+ P LMS+T L T V+ P + N
Sbjct: 5420 TNTAVTNVGTSGSGHKSQSSVLADSETSKATP-LMSTTSTLGDTSVSTSTPNISQTNQIQ 5478
Query: 592 TSP--SVHSARYGNSSDMYTPLTTRRNSEYEHM 622
T P S+ +S+ T TT N+ + ++
Sbjct: 5479 TEPTASLSPRLRESSTSEKTSSTTETNTAFSYV 5511
Score = 31.6 bits (70), Expect = 2.4
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 11/104 (10%)
Query: 406 TEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVT 465
TE + P S SP S+TSVE+ P +S + + + S T + T S +
Sbjct: 9769 TEVLDTSSEPKTSSSPNLSSTSVEI-PATSEIMTDTEKIHPSSNTAVAKVRTSSSVHESH 9827
Query: 466 TAAGSPAENSQQLPCMRNTHV----------PSSSVTHRIPVYP 499
++ + +E + +P M T P+ S T RIP P
Sbjct: 9828 SSVLADSETTITIPSMGITSAVDDTTVFTSNPAFSETRRIPTEP 9871
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 37.0 bits (84), Expect = 0.056
Identities = 47/203 (23%), Positives = 68/203 (33%), Gaps = 30/203 (14%)
Query: 405 LTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTV 464
L +P P + P SAT+ P S+P + T +TT A S + T
Sbjct: 154 LAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTA 213
Query: 465 ---TTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPH 521
T A +PA S P P+ S T P+ +
Sbjct: 214 APPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPL-------------------SSSAP 254
Query: 522 PMQSQYPALPHDTAISGPLHYAPYHRSSA--------QYPFNSPTSRMEPCLMSSTPRLH 573
P + P P T + AP ++A P +SP + +TP
Sbjct: 255 PETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSS 314
Query: 574 PTPVTPRWPEVPSANTCYTSPSV 596
PT + P E +A T T+ SV
Sbjct: 315 PTTLAPDTSETSAAPTHQTTTSV 337
>gi|239749213 PREDICTED: mucin 3B, cell surface associated, partial
[Homo sapiens]
Length = 1063
Score = 37.0 bits (84), Expect = 0.056
Identities = 64/266 (24%), Positives = 108/266 (40%), Gaps = 30/266 (11%)
Query: 395 STAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQ 454
ST + I T++ + +P S + +TS PP +S ++ T +T+ +
Sbjct: 59 STPSLTFSITTTKSTSYSPPSFTSSITSTESTSHSTPPFTSSIT------TNETTSHSTP 112
Query: 455 SYTWSLTYTVTTAAGSPA-ENSQQLPCMRNTHVP--SSSVT------HRIPVYPHREEHG 505
S+T S+T T TT+ +P+ +S + R+ P +SSVT H P +
Sbjct: 113 SFTTSITKTKTTSHSTPSFTSSNSITDSRSHSTPPFTSSVTTPEMTSHNTPSFMSSIITT 172
Query: 506 YTGSYNYGSYGNQHPHPMQSQYPAL---PHDTAISGPLHYAPYHRSSAQYPFNSPTSR-M 561
T S++ S+ + H S P TA +G + P SS + + R +
Sbjct: 173 ETTSHSTPSFTSSTIHSTVSSSTTAITSPFTTAETG-VTSTPSSPSSLSTDIPTTSLRTL 231
Query: 562 EPCLMSSTPRLHPTPVTPRWP-EVPSANT----CYTSPSVHSARYGN-----SSDMYTPL 611
P +S++ L T P P ++ S T +SPS+ S + S M T
Sbjct: 232 TPLSLSTSTSLTTTTDLPSIPTDISSLPTPIHIISSSPSIQSTETSSLVGTTSPTMSTVR 291
Query: 612 TTRRNSEYEHMQHFPGFAYINGEAST 637
T R++E + F + E T
Sbjct: 292 ATLRSTENTPISSFSTSIVVTPETPT 317
Score = 30.8 bits (68), Expect = 4.0
Identities = 43/190 (22%), Positives = 70/190 (36%), Gaps = 19/190 (10%)
Query: 405 LTEAAAPTPSPVPSFSPAKSATSVEVPP--PSSPVSNPSPEYTGLSTTGAMQSYTWSLTY 462
LTE + +PS +P ++ + P P+ P P +T A T LT
Sbjct: 492 LTEITPFSYISLPSTTPCPGTITITIVPASPTDPCVEMDP------STEATSPPTTPLTV 545
Query: 463 TVTTAAGSPAENSQQLPCMRNTHVPSSSVT--HRIPVYPHREEHGYTGSYNYGSYGNQHP 520
T +S + TH+ +SS+T + P+ TG+ +
Sbjct: 546 FPFTTEMVTCPSSISMQTTLATHMDTSSMTPESESSIIPNASSSTGTGTVPTNTVFTSTR 605
Query: 521 HPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFN-SPTSRMEPCLMSSTPRLHPTPVTP 579
P + L +++ I PL + P P+S + L +S+ HP+P T
Sbjct: 606 LPTSETW--LSNNSVIPTPLP------GVSTIPLTMKPSSSLPTILRTSSKSTHPSPPTA 657
Query: 580 RWPEVPSANT 589
R E A T
Sbjct: 658 RTSETSVATT 667
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,356,471
Number of Sequences: 37866
Number of extensions: 1316155
Number of successful extensions: 10114
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 302
Number of HSP's that attempted gapping in prelim test: 8197
Number of HSP's gapped (non-prelim): 1530
length of query: 641
length of database: 18,247,518
effective HSP length: 109
effective length of query: 532
effective length of database: 14,120,124
effective search space: 7511905968
effective search space used: 7511905968
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.