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Search of human proteins with 19743881
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19743881 regulatory factor X2 isoform a [Homo sapiens]
(723 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19743881 regulatory factor X2 isoform a [Homo sapiens] 1449 0.0
gi|19743879 regulatory factor X2 isoform b [Homo sapiens] 1387 0.0
gi|19743884 regulatory factor X3 isoform b [Homo sapiens] 902 0.0
gi|4506495 regulatory factor X3 isoform a [Homo sapiens] 882 0.0
gi|238859557 regulatory factor X1 [Homo sapiens] 733 0.0
gi|15011898 regulatory factor X4 isoform b [Homo sapiens] 279 7e-75
gi|47132527 regulatory factor X4 isoform c [Homo sapiens] 279 7e-75
gi|27734871 regulatory factor X, 6 [Homo sapiens] 247 2e-65
gi|19743886 regulatory factor X4 isoform a [Homo sapiens] 193 5e-49
gi|224586784 hypothetical protein LOC731220 [Homo sapiens] 90 6e-18
gi|148613886 regulatory factor X domain containing 2 [Homo sapiens] 71 4e-12
gi|71040090 regulatory factor X, 5 [Homo sapiens] 64 5e-10
gi|4557843 regulatory factor X, 5 [Homo sapiens] 64 5e-10
gi|56549696 E1A binding protein p400 [Homo sapiens] 41 0.003
gi|7662236 TSC22 domain family, member 2 [Homo sapiens] 37 0.084
gi|38201621 eukaryotic translation initiation factor 4 gamma, 1 ... 36 0.11
gi|38201623 eukaryotic translation initiation factor 4 gamma, 1 ... 36 0.11
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens] 36 0.14
gi|21536357 TBP-associated factor 6 isoform delta [Homo sapiens] 35 0.19
gi|21536355 TBP-associated factor 6 isoform gamma [Homo sapiens] 35 0.19
gi|5032147 TBP-associated factor 6 isoform alpha [Homo sapiens] 35 0.19
gi|21536359 TBP-associated factor 6 isoform alpha [Homo sapiens] 35 0.19
gi|19923642 Hermansky-Pudlak syndrome 3 protein [Homo sapiens] 35 0.19
gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo ... 35 0.19
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 35 0.24
gi|187761303 bruno-like 4, RNA binding protein isoform 4 [Homo s... 35 0.24
gi|9945318 MAX binding protein [Homo sapiens] 35 0.24
gi|122114658 hypothetical protein LOC23053 [Homo sapiens] 35 0.32
gi|31563338 forkhead box K2 [Homo sapiens] 35 0.32
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 34 0.42
>gi|19743881 regulatory factor X2 isoform a [Homo sapiens]
Length = 723
Score = 1449 bits (3750), Expect = 0.0
Identities = 723/723 (100%), Positives = 723/723 (100%)
Query: 1 MQNSEGGADSPASVALRPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQ 60
MQNSEGGADSPASVALRPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQ
Sbjct: 1 MQNSEGGADSPASVALRPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQ 60
Query: 61 VQPVQHVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYFEAPGGAQVTVA 120
VQPVQHVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYFEAPGGAQVTVA
Sbjct: 61 VQPVQHVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYFEAPGGAQVTVA 120
Query: 121 ASSPPAVPSHSMVGITMDVGGSPIVSSAGAYLIHGGMDSTRHSLAHTSRSSPATLEMAIE 180
ASSPPAVPSHSMVGITMDVGGSPIVSSAGAYLIHGGMDSTRHSLAHTSRSSPATLEMAIE
Sbjct: 121 ASSPPAVPSHSMVGITMDVGGSPIVSSAGAYLIHGGMDSTRHSLAHTSRSSPATLEMAIE 180
Query: 181 NLQKSEGITSHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAAS 240
NLQKSEGITSHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAAS
Sbjct: 181 NLQKSEGITSHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAAS 240
Query: 241 FGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPR 300
FGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPR
Sbjct: 241 FGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPR 300
Query: 301 YRPAQKTDSLGDSGSHSGLHSTPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDG 360
YRPAQKTDSLGDSGSHSGLHSTPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDG
Sbjct: 301 YRPAQKTDSLGDSGSHSGLHSTPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDG 360
Query: 361 VTLHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDP 420
VTLHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDP
Sbjct: 361 VTLHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDP 420
Query: 421 EGAVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKS 480
EGAVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKS
Sbjct: 421 EGAVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKS 480
Query: 481 LEGWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSD 540
LEGWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSD
Sbjct: 481 LEGWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSD 540
Query: 541 LNRVDFANVQEQASWVCQCEESVVQRLEQDFKLTLQQQSSLDQWASWLDSVVTQVLKQHA 600
LNRVDFANVQEQASWVCQCEESVVQRLEQDFKLTLQQQSSLDQWASWLDSVVTQVLKQHA
Sbjct: 541 LNRVDFANVQEQASWVCQCEESVVQRLEQDFKLTLQQQSSLDQWASWLDSVVTQVLKQHA 600
Query: 601 GSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAEA 660
GSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAEA
Sbjct: 601 GSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAEA 660
Query: 661 TGETPIAVMGEFNDLASLSLTLLDKDDMGDEQRGSEAGPDARSLGEPLVKRERSDPNHSL 720
TGETPIAVMGEFNDLASLSLTLLDKDDMGDEQRGSEAGPDARSLGEPLVKRERSDPNHSL
Sbjct: 661 TGETPIAVMGEFNDLASLSLTLLDKDDMGDEQRGSEAGPDARSLGEPLVKRERSDPNHSL 720
Query: 721 QGI 723
QGI
Sbjct: 721 QGI 723
>gi|19743879 regulatory factor X2 isoform b [Homo sapiens]
Length = 698
Score = 1387 bits (3590), Expect = 0.0
Identities = 698/723 (96%), Positives = 698/723 (96%), Gaps = 25/723 (3%)
Query: 1 MQNSEGGADSPASVALRPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQ 60
MQNSEGGADSPASVALRPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQ
Sbjct: 1 MQNSEGGADSPASVALRPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQ 60
Query: 61 VQPVQHVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYFEAPGGAQVTVA 120
VQPVQHVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYFEAPGGAQVTVA
Sbjct: 61 VQPVQHVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYFEAPGGAQVTVA 120
Query: 121 ASSPPAVPSHSMVGITMDVGGSPIVSSAGAYLIHGGMDSTRHSLAHTSRSSPATLEMAIE 180
ASSPPAVPSHSMVGITMDVGGSPIVSSAGAYLIHGGMDSTRHSLAHTSRSSPATL
Sbjct: 121 ASSPPAVPSHSMVGITMDVGGSPIVSSAGAYLIHGGMDSTRHSLAHTSRSSPATL----- 175
Query: 181 NLQKSEGITSHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAAS 240
QWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAAS
Sbjct: 176 --------------------QWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAAS 215
Query: 241 FGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPR 300
FGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPR
Sbjct: 216 FGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPR 275
Query: 301 YRPAQKTDSLGDSGSHSGLHSTPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDG 360
YRPAQKTDSLGDSGSHSGLHSTPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDG
Sbjct: 276 YRPAQKTDSLGDSGSHSGLHSTPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDG 335
Query: 361 VTLHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDP 420
VTLHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDP
Sbjct: 336 VTLHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDP 395
Query: 421 EGAVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKS 480
EGAVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKS
Sbjct: 396 EGAVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKS 455
Query: 481 LEGWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSD 540
LEGWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSD
Sbjct: 456 LEGWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSD 515
Query: 541 LNRVDFANVQEQASWVCQCEESVVQRLEQDFKLTLQQQSSLDQWASWLDSVVTQVLKQHA 600
LNRVDFANVQEQASWVCQCEESVVQRLEQDFKLTLQQQSSLDQWASWLDSVVTQVLKQHA
Sbjct: 516 LNRVDFANVQEQASWVCQCEESVVQRLEQDFKLTLQQQSSLDQWASWLDSVVTQVLKQHA 575
Query: 601 GSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAEA 660
GSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAEA
Sbjct: 576 GSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAEA 635
Query: 661 TGETPIAVMGEFNDLASLSLTLLDKDDMGDEQRGSEAGPDARSLGEPLVKRERSDPNHSL 720
TGETPIAVMGEFNDLASLSLTLLDKDDMGDEQRGSEAGPDARSLGEPLVKRERSDPNHSL
Sbjct: 636 TGETPIAVMGEFNDLASLSLTLLDKDDMGDEQRGSEAGPDARSLGEPLVKRERSDPNHSL 695
Query: 721 QGI 723
QGI
Sbjct: 696 QGI 698
>gi|19743884 regulatory factor X3 isoform b [Homo sapiens]
Length = 749
Score = 902 bits (2332), Expect = 0.0
Identities = 478/723 (66%), Positives = 563/723 (77%), Gaps = 33/723 (4%)
Query: 1 MQNSEGGADSPASVALRPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQ 60
MQ SE G+D+ ++V L+ S A+ A P +V+ Q P+ +VQQV Q
Sbjct: 1 MQTSETGSDTGSTVTLQTSVASQA--AVPTQVVQQV-----------PVQ-QQVQQV-QT 45
Query: 61 VQPVQHVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYFEAPGG-AQVTV 119
VQ VQHVYPAQVQYVEG D VYTNGAIRT E QMY+ ++ +YF+ G AQVT
Sbjct: 46 VQQVQHVYPAQVQYVEGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTT 105
Query: 120 AASSPPAVPSHSMVG---ITMDV-GGSPIVSSAGAYLIHGGMDSTRHSLAHTSRSSPATL 175
SS HSMVG I M V GG I SS G YLI M+++ HS+ HT+R+SPAT+
Sbjct: 106 VVSS------HSMVGTGGIQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATI 159
Query: 176 EMAIENLQKSEGITSHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDP 235
EMAIE LQKS+G+++H+S LLNSHLQWLLDNYETAEGVSLPRS+LYNHYLRHCQEHKLDP
Sbjct: 160 EMAIETLQKSDGLSTHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDP 219
Query: 236 VNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPM 295
VNAASFGKLIRS+FMGLRTRRLGTRGNSKYHYYGIR+KPDSPLNRLQED QYMAMRQQPM
Sbjct: 220 VNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPM 279
Query: 296 HQKPRYRPAQKTDSLGDSGSHSGLHS--TPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLG 353
QK RY+P QK D + D + SG + + EQT+ QSQHHQQ++D S PEF ++
Sbjct: 280 QQKQRYKPMQKVDGVADGFTGSGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEIS 339
Query: 354 SFLLQDGVTLHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWN-SKASSSDGPTS 412
S L DG T D+K+LQ +YR HCEA +DVV+NLQF IEKLW +FW S ++ +DG T
Sbjct: 340 S--LPDGTTFEDIKSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTI 397
Query: 413 LPASDEDPEGAVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQ 472
+S+ + LPK KLI+LC+ + IL+WM +CDH +YQALVEILIPDVLRP+PS LTQ
Sbjct: 398 TESSNLSEIESRLPKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQ 457
Query: 473 AIRNFAKSLEGWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTS 532
AIRNFAKSLEGWL+NAM++ PQ++IQTKV VSAFAQTLRRYTSLNHLAQAARAVLQNTS
Sbjct: 458 AIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTS 517
Query: 533 QINQMLSDLNRVDFANVQEQASWVCQCEESVVQRLEQDFKLTLQQQSSLDQWASWLDSVV 592
QINQMLSDLNRVDFANVQEQASWVCQC++++VQRLE DFK+TLQQQS+L+QWA+WLD+V+
Sbjct: 518 QINQMLSDLNRVDFANVQEQASWVCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVM 577
Query: 593 TQVLKQHAGSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL 652
Q LK + G PSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL
Sbjct: 578 MQALKPYEGRPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL 637
Query: 653 VEHRVAEATGETPIAVMGEFNDLASLSLTLLDKDDMGDEQRGSEAGPDARSLGEPLVKRE 712
VEHRVA+ATGETPIAVMGEF DL ++S LDKD+ + + SE + EP KRE
Sbjct: 638 VEHRVAQATGETPIAVMGEFGDLNAVSPGNLDKDEGSEVE--SEMDEELDDSSEPQAKRE 695
Query: 713 RSD 715
+++
Sbjct: 696 KTE 698
>gi|4506495 regulatory factor X3 isoform a [Homo sapiens]
Length = 707
Score = 882 bits (2279), Expect = 0.0
Identities = 463/682 (67%), Positives = 540/682 (79%), Gaps = 31/682 (4%)
Query: 1 MQNSEGGADSPASVALRPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQ 60
MQ SE G+D+ ++V L+ S A+ A P +V+ Q P+ +VQQV Q
Sbjct: 1 MQTSETGSDTGSTVTLQTSVASQA--AVPTQVVQQV-----------PVQ-QQVQQV-QT 45
Query: 61 VQPVQHVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYFEAPGG-AQVTV 119
VQ VQHVYPAQVQYVEG D VYTNGAIRT E QMY+ ++ +YF+ G AQVT
Sbjct: 46 VQQVQHVYPAQVQYVEGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTT 105
Query: 120 AASSPPAVPSHSMVG---ITMDV-GGSPIVSSAGAYLIHGGMDSTRHSLAHTSRSSPATL 175
SS HSMVG I M V GG I SS G YLI M+++ HS+ HT+R+SPAT+
Sbjct: 106 VVSS------HSMVGTGGIQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATI 159
Query: 176 EMAIENLQKSEGITSHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDP 235
EMAIE LQKS+G+++H+S LLNSHLQWLLDNYETAEGVSLPRS+LYNHYLRHCQEHKLDP
Sbjct: 160 EMAIETLQKSDGLSTHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDP 219
Query: 236 VNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPM 295
VNAASFGKLIRS+FMGLRTRRLGTRGNSKYHYYGIR+KPDSPLNRLQED QYMAMRQQPM
Sbjct: 220 VNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPM 279
Query: 296 HQKPRYRPAQKTDSLGDSGSHSGLHS--TPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLG 353
QK RY+P QK D + D + SG + + EQT+ QSQHHQQ++D S PEF ++
Sbjct: 280 QQKQRYKPMQKVDGVADGFTGSGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEIS 339
Query: 354 SFLLQDGVTLHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWN-SKASSSDGPTS 412
S L DG T D+K+LQ +YR HCEA +DVV+NLQF IEKLW +FW S ++ +DG T
Sbjct: 340 S--LPDGTTFEDIKSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTI 397
Query: 413 LPASDEDPEGAVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQ 472
+S+ + LPK KLI+LC+ + IL+WM +CDH +YQALVEILIPDVLRP+PS LTQ
Sbjct: 398 TESSNLSEIESRLPKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQ 457
Query: 473 AIRNFAKSLEGWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTS 532
AIRNFAKSLEGWL+NAM++ PQ++IQTKV VSAFAQTLRRYTSLNHLAQAARAVLQNTS
Sbjct: 458 AIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTS 517
Query: 533 QINQMLSDLNRVDFANVQEQASWVCQCEESVVQRLEQDFKLTLQQQSSLDQWASWLDSVV 592
QINQMLSDLNRVDFANVQEQASWVCQC++++VQRLE DFK+TLQQQS+L+QWA+WLD+V+
Sbjct: 518 QINQMLSDLNRVDFANVQEQASWVCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVM 577
Query: 593 TQVLKQHAGSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL 652
Q LK + G PSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL
Sbjct: 578 MQALKPYEGRPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL 637
Query: 653 VEHRVAEATGETPIAVMGEFND 674
VEHRVA+ATGETPIAVMGE +
Sbjct: 638 VEHRVAQATGETPIAVMGEVRE 659
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 733 bits (1893), Expect = 0.0
Identities = 412/757 (54%), Positives = 503/757 (66%), Gaps = 96/757 (12%)
Query: 25 VPASPQRVLVQAASSNPKGAQMQPISLPRVQ--QVPQQVQ-----PVQHVYPAQVQYVEG 77
VP + +R +VQA PK +QP+++ +Q V Q+VQ PV HVY +QVQYVEG
Sbjct: 241 VPVTQERSVVQATPQAPKPGPVQPLTVQGLQPVHVAQEVQQLQQVPVPHVYSSQVQYVEG 300
Query: 78 GDAVYTNGAIRTAYTYNPEPQMYAPSSTASYFEAPGGA-QVTVAASSPPAVPSHSMVGIT 136
GDA YT AIR++ PE +Y +++ SY+EA G A QV+ A+S S SM
Sbjct: 301 GDASYTASAIRSSTYSYPETPLYTQTASTSYYEAAGTATQVSTPATSQAVASSGSM---P 357
Query: 137 MDVGGSPIVSS-----------------------------------------AGAYLIHG 155
M V GS +V+S AG Y+I G
Sbjct: 358 MYVSGSQVVASSTSTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGAGTYVIQG 417
Query: 156 G--MDSTRHSLAHTSRSSPATLEMAIENLQKSEGITSHKSGLLNSHLQWLLDNYETAEGV 213
G + S S +HT+R+SPAT+ QWLLDNYETAEGV
Sbjct: 418 GYMLGSASQSYSHTTRASPATV-------------------------QWLLDNYETAEGV 452
Query: 214 SLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLK 273
SLPRS+LY HYL HCQE KL+PVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYG+R+K
Sbjct: 453 SLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIK 512
Query: 274 PDSPLNRLQEDTQYMAMRQQPMHQKPRYRPAQKTDSLGDSGSHSGLHSTPEQTMAVQSQH 333
SPL RL ED Q+MAMR QP QK R +P QK + + + + ST ++ Q Q
Sbjct: 513 ASSPLLRLMEDQQHMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGQQPSTGLSDISAQVQQ 572
Query: 334 HQQYIDVSHVFPEFPAPDLGSFLLQDGVTLHDVKALQLVYRRHCEATVDVVMNLQFHYIE 393
+QQ++D S P+F DL +L +GV D+KA Q++YR HCEA VDV++NLQF +E
Sbjct: 573 YQQFLDASRSLPDFTELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVE 632
Query: 394 KLWLSFWNSKASSSDGPTSLPASDEDPEGAVLPKDKLISLCQCDPILRWMRSCDHILYQA 453
LW +FW S L DE + LPK L+ L + +P+L+W + CD++LYQ
Sbjct: 633 TLWKTFWRYNLSQPSEAPPLAVHDEAEKR--LPKAILVLLSKFEPVLQWTKHCDNVLYQG 690
Query: 454 LVEILIPDVLRPVPSTLTQAIRNFAKSLEGWLTNAMSDFPQQVIQTKVGVVSAFAQTLRR 513
LVEILIPDVLRP+PS LTQAIRNFAKSLE WLT+AM + P+++++ KV AFAQTLRR
Sbjct: 691 LVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRR 750
Query: 514 YTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCEESVVQRLEQDFKL 573
YTSLNHLAQAARAVLQNT+QINQMLSDLNRVDFANVQEQASWVC+CE+ VVQRLEQDFK+
Sbjct: 751 YTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKV 810
Query: 574 TLQQQSSLDQWASWLDSVVTQVLKQHAGSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAA 633
TLQQQ+SL+QWA+WLD VV+QVLK + GS FPKAA+ FLLKWSFYSSMVIRDLTLRSAA
Sbjct: 811 TLQQQNSLEQWAAWLDGVVSQVLKPYQGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAA 870
Query: 634 SFGSFHLIRLLYDEYMFYLVEHRVAEATGETPIAVMGEFNDLA-SLSLTLLDKDDMGDEQ 692
SFGSFHLIRLLYDEYM+YL+EHRVA+A GETPIAVMGEF +LA SL+ DKD+ +E+
Sbjct: 871 SFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEFANLATSLNPLDPDKDEEEEEE 930
Query: 693 RGSE----------AGPDARSLG----EPLVKRERSD 715
SE AG ++ +LG EP K R+D
Sbjct: 931 EESEDELPQDISLAAGGESPALGPETLEPPAKLARTD 967
Score = 39.3 bits (90), Expect = 0.013
Identities = 40/139 (28%), Positives = 56/139 (40%), Gaps = 8/139 (5%)
Query: 4 SEGGADSPASVALRPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQVQP 63
SE S AS P+ V + QR+LVQ S K + P+ L + QVPQQ P
Sbjct: 117 SEASPGSTASQTGVPTQVVQQVQGTQQRLLVQT-SVQAKPGHVSPLQLTNI-QVPQQALP 174
Query: 64 VQH-VYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYFEAPGGA-----QV 117
Q V + +GG T + ++ + + A SS++ AP G QV
Sbjct: 175 TQRLVVQSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSKTAGAPTGTVPQQLQV 234
Query: 118 TVAASSPPAVPSHSMVGIT 136
S P S+V T
Sbjct: 235 HGVQQSVPVTQERSVVQAT 253
Score = 35.8 bits (81), Expect = 0.14
Identities = 35/117 (29%), Positives = 47/117 (40%), Gaps = 12/117 (10%)
Query: 17 RPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQVQPVQHVYPAQVQYVE 76
+P PP PA+PQ A++ P QP + +Q Q QP Q QYV
Sbjct: 26 QPQPPPPPPPAAPQPPQPPTAAATP-----QPQYVTELQSPQPQAQPPG----GQKQYVT 76
Query: 77 GGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYFEAPGGAQVTVAASSPPAVPSHSMV 133
AV A T +P PQ Y + E A TV+ +SP + S + V
Sbjct: 77 ELPAVPAPSQPTGAPTPSPAPQQYI---VVTVSEGAMRASETVSEASPGSTASQTGV 130
>gi|15011898 regulatory factor X4 isoform b [Homo sapiens]
Length = 563
Score = 279 bits (713), Expect = 7e-75
Identities = 172/479 (35%), Positives = 252/479 (52%), Gaps = 60/479 (12%)
Query: 200 LQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVFMGLRTRRLGT 259
LQWL +NYE AEGV +PRS+LY HYL C+++ PVNAASFGK+IR F L TRRLGT
Sbjct: 71 LQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGT 130
Query: 260 RGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPRYRPAQKTDSLGDSGSHSGL 319
RG SKYHYYGI +K E +QY D + + +
Sbjct: 131 RGQSKYHYYGIAVK---------ESSQYY-------------------DVMYSKKGAAWV 162
Query: 320 HSTPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDGVTLHDVKALQLVYRRHCEA 379
T ++ ++ Q+ + + + PEF P++ L + V ++YR HC+
Sbjct: 163 SETGKKEVSKQTVAYSPRSKLGTLLPEF--PNVKDLNLPASLPEEKVSTFIMMYRTHCQR 220
Query: 380 TVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDPEGAVLPKDKLISLCQCDPI 439
+D V+ F ++ L FW P LP VL ++++
Sbjct: 221 ILDTVIRANFDEVQSFLLHFWQGMP-----PHMLP---------VLGSSTVVNI------ 260
Query: 440 LRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKSLEGWLTNAMSDFPQQVIQT 499
+ CD ILY+A+ +L+P VL+ +P +LTQ IR FAK L+ WL A+ D P+ +
Sbjct: 261 ---VGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNI 317
Query: 500 KVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQC 559
K + F+Q LRR TSLNHL QA+R V+ + QML D VD ++ +Q + +
Sbjct: 318 KFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMED 377
Query: 560 ----EESVVQRLEQDFKLTLQQQSSLDQWASWLDSVVTQVLKQHAG--SPSFPKAARQFL 613
++ +L Q+F L++QS ++ + WLD++V + + + A S K A+QFL
Sbjct: 378 SRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFL 437
Query: 614 LKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEH-RVAEATGETPIAVMGE 671
L WS + + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E E E A+ GE
Sbjct: 438 LMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGE 496
>gi|47132527 regulatory factor X4 isoform c [Homo sapiens]
Length = 735
Score = 279 bits (713), Expect = 7e-75
Identities = 172/479 (35%), Positives = 252/479 (52%), Gaps = 60/479 (12%)
Query: 200 LQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVFMGLRTRRLGT 259
LQWL +NYE AEGV +PRS+LY HYL C+++ PVNAASFGK+IR F L TRRLGT
Sbjct: 62 LQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGT 121
Query: 260 RGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPRYRPAQKTDSLGDSGSHSGL 319
RG SKYHYYGI +K E +QY D + + +
Sbjct: 122 RGQSKYHYYGIAVK---------ESSQYY-------------------DVMYSKKGAAWV 153
Query: 320 HSTPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDGVTLHDVKALQLVYRRHCEA 379
T ++ ++ Q+ + + + PEF P++ L + V ++YR HC+
Sbjct: 154 SETGKKEVSKQTVAYSPRSKLGTLLPEF--PNVKDLNLPASLPEEKVSTFIMMYRTHCQR 211
Query: 380 TVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDPEGAVLPKDKLISLCQCDPI 439
+D V+ F ++ L FW P LP VL ++++
Sbjct: 212 ILDTVIRANFDEVQSFLLHFWQGMP-----PHMLP---------VLGSSTVVNI------ 251
Query: 440 LRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKSLEGWLTNAMSDFPQQVIQT 499
+ CD ILY+A+ +L+P VL+ +P +LTQ IR FAK L+ WL A+ D P+ +
Sbjct: 252 ---VGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNI 308
Query: 500 KVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQC 559
K + F+Q LRR TSLNHL QA+R V+ + QML D VD ++ +Q + +
Sbjct: 309 KFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMED 368
Query: 560 ----EESVVQRLEQDFKLTLQQQSSLDQWASWLDSVVTQVLKQHAG--SPSFPKAARQFL 613
++ +L Q+F L++QS ++ + WLD++V + + + A S K A+QFL
Sbjct: 369 SRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFL 428
Query: 614 LKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEH-RVAEATGETPIAVMGE 671
L WS + + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E E E A+ GE
Sbjct: 429 LMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGE 487
>gi|27734871 regulatory factor X, 6 [Homo sapiens]
Length = 928
Score = 247 bits (631), Expect = 2e-65
Identities = 157/466 (33%), Positives = 235/466 (50%), Gaps = 64/466 (13%)
Query: 200 LQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVFMGLRTRRLGT 259
LQWL +NY EGV LPR LY HYL C++ KL+P AA+FGK IR F L TRRLGT
Sbjct: 125 LQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLGT 184
Query: 260 RGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPRYRPAQKTDSLGDSGSHSGL 319
RG+SKYHYYGI +K S + + R+ ++ L + G +
Sbjct: 185 RGHSKYHYYGIGIKESSAYYHSVYSGKGLT----------RFSGSK----LKNEGGFTRK 230
Query: 320 HSTPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDGVTLHDVKALQLVYRRHCEA 379
+S +T + PEFP+ + Q ++ V L ++Y+ HC+
Sbjct: 231 YSLSSKT--------------GTLLPEFPSAQ--HLVYQGCISKDKVDTLIMMYKTHCQC 274
Query: 380 TVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDPEGAVLPKDKLISLCQCDPI 439
+D +N F I+ L FW D L+ L + I
Sbjct: 275 ILDNAINGNFEEIQHFLLHFWQGMP-----------------------DHLLPLLENPVI 311
Query: 440 LRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKSLEGWLTNAMSDFPQQVIQT 499
+ CD ILY+ L ++LIP ++ +P +L IRNFAK+ E W+ +++ + P+ +
Sbjct: 312 IDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALTDK 371
Query: 500 KVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQA----SW 555
K+ +V F +L+R TS HLAQ AR L + +N M+SD+ RVD ++ QA S
Sbjct: 372 KIPIVRRFVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIERVDLNSIGSQALLTISG 431
Query: 556 VCQCEESVVQRLE-----QDFKLTLQQQSSLDQWASWLDSVVTQ--VLKQHAGSPSFPKA 608
E + + Q+ K L++ ++++ + WLD+VV Q + S K
Sbjct: 432 STDTESGIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQNGRSLKKR 491
Query: 609 ARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVE 654
A+ FLLKWSF+ + V+ +LTL +A+SFGSFHLIR+L DEY+ +E
Sbjct: 492 AQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAME 537
>gi|19743886 regulatory factor X4 isoform a [Homo sapiens]
Length = 641
Score = 193 bits (490), Expect = 5e-49
Identities = 133/414 (32%), Positives = 203/414 (49%), Gaps = 60/414 (14%)
Query: 265 YHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPRYRPAQKTDSLGDSGSHSGLHSTPE 324
YHYYGI +K E +QY + M+ K +T G +
Sbjct: 33 YHYYGIAVK---------ESSQYYDV----MYSKKGAAWVSET----------GKKEVSK 69
Query: 325 QTMAVQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDGVTLHDVKALQLVYRRHCEATVDVV 384
QT+A + + + PEFP ++ L + V ++YR HC+ +D V
Sbjct: 70 QTVAYSPRSK-----LGTLLPEFP--NVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTV 122
Query: 385 MNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDPEGAVLPKDKLISLCQCDPILRWMR 444
+ F ++ L FW P LP VL ++++ +
Sbjct: 123 IRANFDEVQSFLLHFWQGMP-----PHMLP---------VLGSSTVVNI---------VG 159
Query: 445 SCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKSLEGWLTNAMSDFPQQVIQTKVGVV 504
CD ILY+A+ +L+P VL+ +P +LTQ IR FAK L+ WL A+ D P+ + K +
Sbjct: 160 VCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELS 219
Query: 505 SAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQC----E 560
F+Q LRR TSLNHL QA+R V+ + QML D VD ++ +Q + +
Sbjct: 220 RRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDEH 279
Query: 561 ESVVQRLEQDFKLTLQQQSSLDQWASWLDSVVTQVLKQHAG--SPSFPKAARQFLLKWSF 618
++ +L Q+F L++QS ++ + WLD++V + + + A S K A+QFLL WS
Sbjct: 280 RKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSC 339
Query: 619 YSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEH-RVAEATGETPIAVMGE 671
+ + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E E E A+ GE
Sbjct: 340 FGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGE 393
>gi|224586784 hypothetical protein LOC731220 [Homo sapiens]
Length = 473
Score = 90.1 bits (222), Expect = 6e-18
Identities = 79/326 (24%), Positives = 141/326 (43%), Gaps = 37/326 (11%)
Query: 355 FLLQDGVTLHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLP 414
FL Q+ + + + +C D++ N +E L SFW S + SLP
Sbjct: 48 FLEQELAKKYSCNMMAFLADEYCNYCRDILRN-----VEDLLTSFWKSLQQDTVMLMSLP 102
Query: 415 ASDEDPEGAVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAI 474
+CQ + D LY+ + ++L+ D L V +++
Sbjct: 103 -----------------DVCQL------FKCYDVQLYKGIEDVLLHDFLEDVSIQYLKSV 139
Query: 475 RNFAKSLEGWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQI 534
+ F+K + WL NA+ P + +K+ V+ F + LRR T L+++A+ R VL++ ++
Sbjct: 140 QLFSKKFKLWLLNALEGVPALLQISKLKEVTLFVKRLRRKTYLSNMAKTMRMVLKSKRRV 199
Query: 535 NQMLSDLNRVDFANVQEQASWVCQCEESVVQRLEQDFKL--------TLQQQSSLDQWAS 586
+ + SDL + + + S LE + ++ L + L + S
Sbjct: 200 SVLKSDLQAIINQGTLATSKKALASDRSGADELENNPEMKCLRNLISLLGTSTDLRVFLS 259
Query: 587 WLDSVVTQVLKQHAGS-PSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLY 645
L S + + Q + S F K A F L+W+ + V + +TL SFGS+HL LL
Sbjct: 260 CLSSHLQAFVFQTSRSKEEFTKLAASFQLRWNLLLTAVSKAMTLCHRDSFGSWHLFHLLL 319
Query: 646 DEYMFYLVEHRVAEATGETPIAVMGE 671
EYM ++++ + E E + + E
Sbjct: 320 LEYMIHILQSCLEEEEEEEDMGTVKE 345
>gi|148613886 regulatory factor X domain containing 2 [Homo sapiens]
Length = 1460
Score = 70.9 bits (172), Expect = 4e-12
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 175 LEMAIENLQKSEGITSHKSGLLNSH-LQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKL 233
L + N +KS+ S H W+ + E SLP+ +Y+ Y +C
Sbjct: 83 LPSGLSNGEKSDQNAMSSSRAQQMHAFSWIRNTLEEHPETSLPKQEVYDEYKSYCDNLGY 142
Query: 234 DPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLK 273
P++AA FGK++++VF ++ RRLGTRG SKY Y G+R K
Sbjct: 143 HPLSAADFGKIMKNVFPNMKARRLGTRGKSKYCYSGLRKK 182
>gi|71040090 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 63.9 bits (154), Expect = 5e-10
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 201 QWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKL-DPVNAASFGKLIRSVFMGLRTRRLGT 259
+W+ ++ E LP+ S+Y+ Y ++C+ P++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 260 RGNSKYHYYGIRLK 273
RG SKY Y GIR K
Sbjct: 154 RGQSKYCYSGIRRK 167
>gi|4557843 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 63.9 bits (154), Expect = 5e-10
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 201 QWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKL-DPVNAASFGKLIRSVFMGLRTRRLGT 259
+W+ ++ E LP+ S+Y+ Y ++C+ P++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 260 RGNSKYHYYGIRLK 273
RG SKY Y GIR K
Sbjct: 154 RGQSKYCYSGIRRK 167
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 41.2 bits (95), Expect = 0.003
Identities = 54/220 (24%), Positives = 84/220 (38%), Gaps = 36/220 (16%)
Query: 18 PSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQ-QVQPVQHVYPAQVQYVE 76
P PP P P L Q ++ + P P+ Q PQ Q QPVQ AQ
Sbjct: 2509 PQPQPPPPPQQPPPPLPQPQAAGSQPPAGPPAVQPQPQPQPQTQPQPVQAPAKAQPAITT 2568
Query: 77 GGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYFEAPGGAQVTVAASSPPAVPSHSMVGIT 136
GG A G I+T+ T P G V ++ VP+ + I
Sbjct: 2569 GGSAAVLAGTIKTSVTGTSMP--------------TGAVSGNVIVNTIAGVPAATFQSIN 2614
Query: 137 MDVGGSPIVSSAGAYLIHGGMDSTRHSLAHT-----SRSSPATLEMAIENLQKSEGITS- 190
+ SP+ + GA GG S + HT + SPAT + ++ ++G+ +
Sbjct: 2615 KRL-ASPV--APGALTTPGG--SAPAQVVHTQPPPRAVGSPATATPDLVSMATTQGVRAV 2669
Query: 191 ---HKSGLLNSHL-------QWLLDNYETAEGVSLPRSSL 220
S ++ ++L + L+ A GV LP ++
Sbjct: 2670 TSVTASAVVTTNLTPVQTPARSLVPQVSQATGVQLPGKTI 2709
>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
Length = 780
Score = 36.6 bits (83), Expect = 0.084
Identities = 52/183 (28%), Positives = 69/183 (37%), Gaps = 35/183 (19%)
Query: 6 GGADSPASVALRPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQVQPVQ 65
GGA + +S L P P PQ ++ A S P+GA +LP P V Q
Sbjct: 282 GGAVAQSSAPLPPF---PGAATGPQPMMAAAQPSQPQGAGPGGQTLP-----PTNVTLAQ 333
Query: 66 HVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQM-------YAPSSTASYFEAPGGAQVT 118
PA + G AV A + P+PQ+ PS + Y Q
Sbjct: 334 ---PAMSLPPQPGPAVGAPAAQQPQQFAYPQPQIPPGHLLPVQPSGQSEYL------QQH 384
Query: 119 VAASSPPAVPSHSMVG--------ITMDVGGSPIVSSAGAYLIHGGMDSTRHSLAHTSRS 170
VA PP+ S G T+ VG SS GA L+ S++ S A R+
Sbjct: 385 VAGLQPPSPAQPSSTGAAASPATAATLPVGTGQNASSVGAQLMGA---SSQPSEAMAPRT 441
Query: 171 SPA 173
PA
Sbjct: 442 GPA 444
Score = 30.4 bits (67), Expect = 6.0
Identities = 46/153 (30%), Positives = 57/153 (37%), Gaps = 19/153 (12%)
Query: 3 NSEGGADSPASVALRPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQVQ 62
+S G A SPA+ A P AS + ASS P A M P + P Q
Sbjct: 397 SSTGAAASPATAATLPVGTGQN--ASSVGAQLMGASSQPSEA-MAPRTGPAQGGQVAPCQ 453
Query: 63 PVQHVYPAQVQYVEGGDAVYTNGAIRTAYTYN-PEPQMYAPSSTASYFEAPGGAQVTV-- 119
P V PA V GG G + P PQM ++ PGG V
Sbjct: 454 PTG-VPPATV----GGVVQPCLGPAGAGQPQSVPPPQMGGSGPLSA---VPGGPHAVVPG 505
Query: 120 -----AASSPPAVPSHSMVGITMDVGGSPIVSS 147
AA P+VPS S +TM +P+ S
Sbjct: 506 VPNVPAAVPAPSVPSVSTTSVTMPNVPAPLAQS 538
>gi|38201621 eukaryotic translation initiation factor 4 gamma, 1
isoform 1 [Homo sapiens]
Length = 1599
Score = 36.2 bits (82), Expect = 0.11
Identities = 36/157 (22%), Positives = 50/157 (31%), Gaps = 32/157 (20%)
Query: 18 PSAAAP--PVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQVQ------------- 62
P A +P P PA P S P+ QM S PR P + Q
Sbjct: 11 PPAPSPGLPQPAFPPGQTAPVVFSTPQATQMNTPSQPRQHFYPSRAQPPSSAASRVQSAA 70
Query: 63 -----PVQHVYPA---------QVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASY 108
P HVYPA Q+ Y A Y G R+ Y + P + Y
Sbjct: 71 PARPGPAAHVYPAGSQVMMIPSQISYPASQGAYYIPGQGRSTYVVPTQQYPVQPGAPGFY 130
Query: 109 FEAPGGAQVTVAASSPPAVPSHSMVGITMDVGGSPIV 145
PG + + P+ + V +P++
Sbjct: 131 ---PGASPTEFGTYAGAYYPAQGVQQFPTGVAPAPVL 164
>gi|38201623 eukaryotic translation initiation factor 4 gamma, 1
isoform 1 [Homo sapiens]
Length = 1599
Score = 36.2 bits (82), Expect = 0.11
Identities = 36/157 (22%), Positives = 50/157 (31%), Gaps = 32/157 (20%)
Query: 18 PSAAAP--PVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQVQ------------- 62
P A +P P PA P S P+ QM S PR P + Q
Sbjct: 11 PPAPSPGLPQPAFPPGQTAPVVFSTPQATQMNTPSQPRQHFYPSRAQPPSSAASRVQSAA 70
Query: 63 -----PVQHVYPA---------QVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASY 108
P HVYPA Q+ Y A Y G R+ Y + P + Y
Sbjct: 71 PARPGPAAHVYPAGSQVMMIPSQISYPASQGAYYIPGQGRSTYVVPTQQYPVQPGAPGFY 130
Query: 109 FEAPGGAQVTVAASSPPAVPSHSMVGITMDVGGSPIV 145
PG + + P+ + V +P++
Sbjct: 131 ---PGASPTEFGTYAGAYYPAQGVQQFPTGVAPAPVL 164
>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
Length = 727
Score = 35.8 bits (81), Expect = 0.14
Identities = 36/127 (28%), Positives = 49/127 (38%), Gaps = 11/127 (8%)
Query: 8 ADSPASVALRPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQVQPVQHV 67
A + A PSAA+PP+ + + +AS+ + P PR Q
Sbjct: 319 ASAQPPAAASPSAASPPLATAAAHTAIASASTTAPAS--SPADSPRPQASSYSPAVAASS 376
Query: 68 YPA-QVQYVEGGDA------VYTNGAIRTAYTYNPEP-QMYAPSSTASYFEAPGGAQVTV 119
PA Y EG A V T +IR + Y P P Y+PS A+Y P
Sbjct: 377 APATHTSYSEGPAAPAPKPRVVTTASIRPS-VYQPVPASTYSPSPGANYSPTPYTPSPAP 435
Query: 120 AASSPPA 126
A + PA
Sbjct: 436 AYTPSPA 442
>gi|21536357 TBP-associated factor 6 isoform delta [Homo sapiens]
Length = 667
Score = 35.4 bits (80), Expect = 0.19
Identities = 37/153 (24%), Positives = 55/153 (35%), Gaps = 24/153 (15%)
Query: 6 GGADSPASVALRPSAAAPPVPASP--QRVLVQAASSNPKGAQMQPISLPRVQQVPQQVQP 63
G P + AAAPP P+ P + +++ ++SS P Q+ +S P
Sbjct: 501 GSIALPVQTLVSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSP 560
Query: 64 VQHVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYF--------EAPGG- 114
V P+ V+ + TA T P P S Y E GG
Sbjct: 561 VTTTVPSVQPIVK---------LVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGP 611
Query: 115 ----AQVTVAASSPPAVPSHSMVGITMDVGGSP 143
+ V ASSP + ++ G + G SP
Sbjct: 612 TSHPSPVPPPASSPSPLSGSALCGGKQEAGDSP 644
>gi|21536355 TBP-associated factor 6 isoform gamma [Homo sapiens]
Length = 667
Score = 35.4 bits (80), Expect = 0.19
Identities = 37/153 (24%), Positives = 55/153 (35%), Gaps = 24/153 (15%)
Query: 6 GGADSPASVALRPSAAAPPVPASP--QRVLVQAASSNPKGAQMQPISLPRVQQVPQQVQP 63
G P + AAAPP P+ P + +++ ++SS P Q+ +S P
Sbjct: 501 GSIALPVQTLVSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSP 560
Query: 64 VQHVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYF--------EAPGG- 114
V P+ V+ + TA T P P S Y E GG
Sbjct: 561 VTTTVPSVQPIVK---------LVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGP 611
Query: 115 ----AQVTVAASSPPAVPSHSMVGITMDVGGSP 143
+ V ASSP + ++ G + G SP
Sbjct: 612 TSHPSPVPPPASSPSPLSGSALCGGKQEAGDSP 644
>gi|5032147 TBP-associated factor 6 isoform alpha [Homo sapiens]
Length = 677
Score = 35.4 bits (80), Expect = 0.19
Identities = 37/153 (24%), Positives = 55/153 (35%), Gaps = 24/153 (15%)
Query: 6 GGADSPASVALRPSAAAPPVPASP--QRVLVQAASSNPKGAQMQPISLPRVQQVPQQVQP 63
G P + AAAPP P+ P + +++ ++SS P Q+ +S P
Sbjct: 511 GSIALPVQTLVSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSP 570
Query: 64 VQHVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYF--------EAPGG- 114
V P+ V+ + TA T P P S Y E GG
Sbjct: 571 VTTTVPSVQPIVK---------LVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGP 621
Query: 115 ----AQVTVAASSPPAVPSHSMVGITMDVGGSP 143
+ V ASSP + ++ G + G SP
Sbjct: 622 TSHPSPVPPPASSPSPLSGSALCGGKQEAGDSP 654
>gi|21536359 TBP-associated factor 6 isoform alpha [Homo sapiens]
Length = 677
Score = 35.4 bits (80), Expect = 0.19
Identities = 37/153 (24%), Positives = 55/153 (35%), Gaps = 24/153 (15%)
Query: 6 GGADSPASVALRPSAAAPPVPASP--QRVLVQAASSNPKGAQMQPISLPRVQQVPQQVQP 63
G P + AAAPP P+ P + +++ ++SS P Q+ +S P
Sbjct: 511 GSIALPVQTLVSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSP 570
Query: 64 VQHVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYF--------EAPGG- 114
V P+ V+ + TA T P P S Y E GG
Sbjct: 571 VTTTVPSVQPIVK---------LVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGP 621
Query: 115 ----AQVTVAASSPPAVPSHSMVGITMDVGGSP 143
+ V ASSP + ++ G + G SP
Sbjct: 622 TSHPSPVPPPASSPSPLSGSALCGGKQEAGDSP 654
>gi|19923642 Hermansky-Pudlak syndrome 3 protein [Homo sapiens]
Length = 1004
Score = 35.4 bits (80), Expect = 0.19
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 258 GTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPRYRPAQKTDSLGDSGSHS 317
G + + H++ P NR++ + ++ + + + LG+ S
Sbjct: 214 GPKNGERVHHH-----PHKTNNRIRRTEEGISNEISQLESDDFVICQKPLELLGEKSEQS 268
Query: 318 GLHSTPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDGVTLHDVKALQL 371
GL T E T + ++Y H+ APD+ S++L D + LH ++ L +
Sbjct: 269 GLSVTLESTGLADEK--RKYSHFQHLLYRRFAPDISSYVLSDDIKLHSLQLLPI 320
>gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo
sapiens]
Length = 1835
Score = 35.4 bits (80), Expect = 0.19
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 170 SSPATLEMAIENLQKSEGITSHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQ 229
S+PA+ + +++ GI S QWL ++E S+ R+ +Y+ YL C
Sbjct: 497 SAPASRAVVAQHVAPPPGIVEIDSEKFAC--QWLNAHFEVNPDCSVSRAEMYSEYLSTCS 554
Query: 230 EHKLDPV-NAASFGKLIRSVFMGLRTRRL---GTRGNSKYHYYGIR 271
+ + + F K +R+VF +R+ + G + H G++
Sbjct: 555 KLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSNGQAHIHVVGVK 600
Score = 30.4 bits (67), Expect = 6.0
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 14/71 (19%)
Query: 16 LRPSAAAPPVPASPQRVLVQAASSNPKGAQMQP------ISLPRVQQ-------VPQQVQ 62
+ PS++ PVPA+ +V +SS+ +Q P +S+ R QQ PQQVQ
Sbjct: 968 ITPSSSPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPAPPPQQVQ 1027
Query: 63 PVQHVYPAQVQ 73
VQ P QVQ
Sbjct: 1028 -VQVQQPQQVQ 1037
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 35.0 bits (79), Expect = 0.24
Identities = 44/166 (26%), Positives = 59/166 (35%), Gaps = 9/166 (5%)
Query: 11 PASVALRPSAAAPP-VPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQVQPVQHVYP 69
PAS + PSA PP VP +Q S P M P++ P Q P P P
Sbjct: 742 PASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALP 801
Query: 70 AQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYFEAPGG--AQVTVAASSPPAV 127
+ G + ++ + P PQ P A + P A T+ A P
Sbjct: 802 SPPASFPGQAPFSPSASLPMSPLATPPPQA-PPVLAAPLLQVPPSPPASPTLQAPRRPPT 860
Query: 128 P----SHSMVGITMDVG-GSPIVSSAGAYLIHGGMDSTRHSLAHTS 168
P S S +T+ + G P S G D HS + TS
Sbjct: 861 PGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATS 906
Score = 30.4 bits (67), Expect = 6.0
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 8 ADSPASVALRPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQVQPVQHV 67
A P S + P + APP A+P +Q S P M P + P Q P P V
Sbjct: 681 ASPPVSPSATPPSQAPPSLAAPP---LQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQV 737
Query: 68 YPA 70
P+
Sbjct: 738 PPS 740
>gi|187761303 bruno-like 4, RNA binding protein isoform 4 [Homo
sapiens]
Length = 448
Score = 35.0 bits (79), Expect = 0.24
Identities = 29/114 (25%), Positives = 40/114 (35%), Gaps = 12/114 (10%)
Query: 18 PSAAAPPVPASPQRVLVQAASSNPKGAQMQPIS--------LPRVQQVPQQVQPVQHVYP 69
P AP VP+ P + V + P A QP + P Q P P+Q Y
Sbjct: 312 PGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYA 371
Query: 70 AQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASY--FEAPGGAQVTVAA 121
QY G A Y + + + P M + F+ P AQ + A
Sbjct: 372 GVQQY--AGPAAYPAAYGQISQAFPQPPPMIPQQQREGFVSFDNPASAQTAIQA 423
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 35.0 bits (79), Expect = 0.24
Identities = 33/144 (22%), Positives = 49/144 (34%), Gaps = 14/144 (9%)
Query: 18 PSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQVQPV-----QHVYPAQV 72
PS P+P P +P + P LP QQ PQQ P+ PAQ
Sbjct: 371 PSTTPAPLPPHPH--------PHPHSVALPPAHLPVQQQQPQQKTPLPAPPPPPAAPAQT 422
Query: 73 QYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYFEAPGGAQVTVAASSPPAVPSHSM 132
V T G T + + + PGG + A S P+ P+ +
Sbjct: 423 LVPAPAHLVATAGGGSTVIAHTATTHASVIQTVNHVLQGPGGKHIAHIAPSAPS-PAVQL 481
Query: 133 VGITMDVGGSPIVSSAGAYLIHGG 156
T +G + + ++ H G
Sbjct: 482 APATPPIGHITVHPATLNHVAHLG 505
>gi|122114658 hypothetical protein LOC23053 [Homo sapiens]
Length = 1842
Score = 34.7 bits (78), Expect = 0.32
Identities = 42/147 (28%), Positives = 60/147 (40%), Gaps = 20/147 (13%)
Query: 13 SVALRP-SAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQVQPVQHVYPA- 70
S L P +A P +P SPQ + A ++P M + P V VP P Q V+PA
Sbjct: 1507 SPGLHPYTALQPHLPCSPQYLTHPAHPAHP----MPHMPRPAVFPVPSSAYP-QGVHPAF 1561
Query: 71 ---QVQYVEGGDAVYTNG--------AIRTAYTYNPEPQMYAPSSTASYFEAPGGAQVTV 119
Q Y ++ A T + Y+ EP + P+S A G
Sbjct: 1562 LGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSSVH 1621
Query: 120 AASSPPAVPSHSMVGITMDVGGSPIVS 146
AS+ PA+ S+ +T SP+VS
Sbjct: 1622 PASTFPAIQGASLPALTTQ--PSPLVS 1646
>gi|31563338 forkhead box K2 [Homo sapiens]
Length = 660
Score = 34.7 bits (78), Expect = 0.32
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 10 SPASVALRPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQVQPVQHVYP 69
SPA + P AA P + + Q+A +P + QP+ + +Q+PQ ++PV +
Sbjct: 398 SPAPLEPEPGAAQPKLAVIQEARFAQSAPGSPLSS--QPVLITVQRQLPQAIKPVTYTVA 455
Query: 70 AQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPS----STASYFEAPGGAQVTVAASSPP 125
V V ++T + + P + S + A+ + G A VT AA P
Sbjct: 456 TPVTTSTSQPPV-----VQTVHVVHQIPAVSVTSVAGLAPANTYTVSGQAVVTPAAVLAP 510
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 34.3 bits (77), Expect = 0.42
Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 10/146 (6%)
Query: 12 ASVALRPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRV--QQVPQQVQPVQHVYP 69
A A+RP AA PP A V A+++P A + S P VP V+P P
Sbjct: 101 APAAVRPPAAGPPAAAP---AAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPP 157
Query: 70 -AQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYFEAPGGAQVTV----AASSP 124
A + V A + ++ A P +P++ A PG A + AAS P
Sbjct: 158 AAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQP 217
Query: 125 PAVPSHSMVGITMDVGGSPIVSSAGA 150
AVP+ + + +P ++ A
Sbjct: 218 AAVPAAASPAAAAPLAVNPAAAARAA 243
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.130 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,393,722
Number of Sequences: 37866
Number of extensions: 1328901
Number of successful extensions: 5886
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 5692
Number of HSP's gapped (non-prelim): 248
length of query: 723
length of database: 18,247,518
effective HSP length: 110
effective length of query: 613
effective length of database: 14,082,258
effective search space: 8632424154
effective search space used: 8632424154
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.