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Search of human proteins with 197245452
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens]
(169 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens] 358 2e-99
gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens] 317 4e-87
gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens] 317 4e-87
gi|38045931 ring finger protein 122 [Homo sapiens] 167 3e-42
gi|14149702 ring finger protein 167 [Homo sapiens] 68 3e-12
gi|34577087 ring finger protein 13 [Homo sapiens] 67 6e-12
gi|6005864 ring finger protein 13 [Homo sapiens] 67 6e-12
gi|58331204 ring finger protein 150 [Homo sapiens] 64 8e-11
gi|37675277 ring finger protein 148 [Homo sapiens] 63 1e-10
gi|29789407 ring finger protein 149 [Homo sapiens] 62 2e-10
gi|7662486 ring finger protein 44 [Homo sapiens] 59 2e-09
gi|29788758 ring finger protein 130 [Homo sapiens] 59 2e-09
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 59 3e-09
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 59 3e-09
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 59 3e-09
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 59 3e-09
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 59 3e-09
gi|63025220 ring finger protein 215 [Homo sapiens] 59 3e-09
gi|21040269 ring finger protein 133 [Homo sapiens] 57 6e-09
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 57 1e-08
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 57 1e-08
gi|21389515 ring finger protein 145 [Homo sapiens] 56 2e-08
gi|56711322 ring finger protein 43 [Homo sapiens] 55 3e-08
gi|150170725 zinc and ring finger 4 [Homo sapiens] 55 3e-08
gi|5174653 ring finger protein 6 [Homo sapiens] 54 6e-08
gi|34305295 ring finger protein 6 [Homo sapiens] 54 6e-08
gi|34305293 ring finger protein 6 [Homo sapiens] 54 6e-08
gi|150378447 zinc and ring finger 3 [Homo sapiens] 54 8e-08
gi|33859668 Rabring 7 [Homo sapiens] 53 1e-07
gi|109240538 polycomb group ring finger 1 [Homo sapiens] 52 2e-07
>gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens]
Length = 169
Score = 358 bits (918), Expect = 2e-99
Identities = 169/169 (100%), Positives = 169/169 (100%)
Query: 1 MLNKSGESRYPALFPVLGGSSMSSDFPHYNFRMPNIGFQNLPLNIYIVVFGTAIFVFILS 60
MLNKSGESRYPALFPVLGGSSMSSDFPHYNFRMPNIGFQNLPLNIYIVVFGTAIFVFILS
Sbjct: 1 MLNKSGESRYPALFPVLGGSSMSSDFPHYNFRMPNIGFQNLPLNIYIVVFGTAIFVFILS 60
Query: 61 LLFCCYLIRLRHQAHKEFYAYKQVILKEKVKELNLHELCAVCLEDFKPRDELGICPCKHA 120
LLFCCYLIRLRHQAHKEFYAYKQVILKEKVKELNLHELCAVCLEDFKPRDELGICPCKHA
Sbjct: 61 LLFCCYLIRLRHQAHKEFYAYKQVILKEKVKELNLHELCAVCLEDFKPRDELGICPCKHA 120
Query: 121 FHRKCLIKWLEVRKVCPLCNMPVLQLAQLHSKQDRGPPQGPLPGAENIV 169
FHRKCLIKWLEVRKVCPLCNMPVLQLAQLHSKQDRGPPQGPLPGAENIV
Sbjct: 121 FHRKCLIKWLEVRKVCPLCNMPVLQLAQLHSKQDRGPPQGPLPGAENIV 169
>gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 317 bits (811), Expect = 4e-87
Identities = 148/148 (100%), Positives = 148/148 (100%)
Query: 22 MSSDFPHYNFRMPNIGFQNLPLNIYIVVFGTAIFVFILSLLFCCYLIRLRHQAHKEFYAY 81
MSSDFPHYNFRMPNIGFQNLPLNIYIVVFGTAIFVFILSLLFCCYLIRLRHQAHKEFYAY
Sbjct: 1 MSSDFPHYNFRMPNIGFQNLPLNIYIVVFGTAIFVFILSLLFCCYLIRLRHQAHKEFYAY 60
Query: 82 KQVILKEKVKELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNM 141
KQVILKEKVKELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNM
Sbjct: 61 KQVILKEKVKELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNM 120
Query: 142 PVLQLAQLHSKQDRGPPQGPLPGAENIV 169
PVLQLAQLHSKQDRGPPQGPLPGAENIV
Sbjct: 121 PVLQLAQLHSKQDRGPPQGPLPGAENIV 148
>gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 317 bits (811), Expect = 4e-87
Identities = 148/148 (100%), Positives = 148/148 (100%)
Query: 22 MSSDFPHYNFRMPNIGFQNLPLNIYIVVFGTAIFVFILSLLFCCYLIRLRHQAHKEFYAY 81
MSSDFPHYNFRMPNIGFQNLPLNIYIVVFGTAIFVFILSLLFCCYLIRLRHQAHKEFYAY
Sbjct: 1 MSSDFPHYNFRMPNIGFQNLPLNIYIVVFGTAIFVFILSLLFCCYLIRLRHQAHKEFYAY 60
Query: 82 KQVILKEKVKELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNM 141
KQVILKEKVKELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNM
Sbjct: 61 KQVILKEKVKELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNM 120
Query: 142 PVLQLAQLHSKQDRGPPQGPLPGAENIV 169
PVLQLAQLHSKQDRGPPQGPLPGAENIV
Sbjct: 121 PVLQLAQLHSKQDRGPPQGPLPGAENIV 148
>gi|38045931 ring finger protein 122 [Homo sapiens]
Length = 155
Score = 167 bits (424), Expect = 3e-42
Identities = 76/113 (67%), Positives = 94/113 (83%), Gaps = 2/113 (1%)
Query: 33 MPNIGFQNLPLNIYIVVFGTAIFVFILSLLFCCYLI-RLRHQAHKEFYAYKQVILKEKVK 91
MP I FQ+LPLNIY+V+FGT IFVF+LSL+FCCY I +LR+QA E Y YK+V+LK K
Sbjct: 25 MPPISFQDLPLNIYMVIFGTGIFVFMLSLIFCCYFISKLRNQAQSERYGYKEVVLKGDAK 84
Query: 92 ELNLH-ELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPV 143
+L L+ + CAVCLEDFK +DELG+ PC+HAFHRKCL+KWLEVR VCP+CN P+
Sbjct: 85 KLQLYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPI 137
>gi|14149702 ring finger protein 167 [Homo sapiens]
Length = 350
Score = 68.2 bits (165), Expect = 3e-12
Identities = 31/111 (27%), Positives = 62/111 (55%), Gaps = 13/111 (11%)
Query: 42 PLNIYIVVFGTAIFVFILSLLFCCYLIRLRHQAHKEFYAYKQVILKEKVKELNLHE---- 97
PL Y++ F + + +L++ ++H+ + + + KE++K++ H+
Sbjct: 169 PLGYYLIPFTGIVGLLVLAMGAVMIARCIQHRKRLQ----RNRLTKEQLKQIPTHDYQKG 224
Query: 98 ----LCAVCLEDFKPRDELGICPCKHAFHRKCLIKWL-EVRKVCPLCNMPV 143
+CA+CL++++ D+L + PC HA+H +C+ WL + RK CP+C PV
Sbjct: 225 DQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPV 275
>gi|34577087 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 67.4 bits (163), Expect = 6e-12
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 9/112 (8%)
Query: 40 NLPLNIYIVVFGTAIFVFILSLLFCCYLIRL----RHQAHKEFYAYKQV--ILKEKVKEL 93
+LPL Y++ F I V I +L ++I RH+A + Q+ + K K+
Sbjct: 177 SLPLEYYLIPF--LIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKG 234
Query: 94 NLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWL-EVRKVCPLCNMPVL 144
+ +++CA+CL++++ D+L I PC HA+H KC+ WL + +K CP+C V+
Sbjct: 235 DEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVV 286
>gi|6005864 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 67.4 bits (163), Expect = 6e-12
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 9/112 (8%)
Query: 40 NLPLNIYIVVFGTAIFVFILSLLFCCYLIRL----RHQAHKEFYAYKQV--ILKEKVKEL 93
+LPL Y++ F I V I +L ++I RH+A + Q+ + K K+
Sbjct: 177 SLPLEYYLIPF--LIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKG 234
Query: 94 NLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWL-EVRKVCPLCNMPVL 144
+ +++CA+CL++++ D+L I PC HA+H KC+ WL + +K CP+C V+
Sbjct: 235 DEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVV 286
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 63.5 bits (153), Expect = 8e-11
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 13/82 (15%)
Query: 99 CAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLAQLHSKQD---- 154
CAVC+E +KP D + I PC+H FH+ C+ WL + CP+C M +L+ + D
Sbjct: 278 CAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNILKALGIPPNADCMDD 337
Query: 155 ---------RGPPQGPLPGAEN 167
GPP + GA +
Sbjct: 338 LPTDFEGSLGGPPTNQITGASD 359
>gi|37675277 ring finger protein 148 [Homo sapiens]
Length = 305
Score = 62.8 bits (151), Expect = 1e-10
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 85 ILKEKVKELNLHE-LCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPV 143
+LKE +EL+L+E C VC + +KP+D + I CKH FH+ C+ WL + CP+C +
Sbjct: 243 VLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCDI 302
Query: 144 LQ 145
L+
Sbjct: 303 LK 304
>gi|29789407 ring finger protein 149 [Homo sapiens]
Length = 400
Score = 62.4 bits (150), Expect = 2e-10
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 97 ELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQ 145
E CAVC+E+FK +D + I PCKH FHR C+ WL + CP+C + V++
Sbjct: 267 ENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIK 315
>gi|7662486 ring finger protein 44 [Homo sapiens]
Length = 432
Score = 59.3 bits (142), Expect = 2e-09
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 98 LCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLC 139
LC VC DF+ R L + PC H FH KC+ KWL+ + CP+C
Sbjct: 379 LCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPIC 420
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 59.3 bits (142), Expect = 2e-09
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 99 CAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQ 145
CAVC+E +K D + I PCKH FH+ C+ WL CP+C + +L+
Sbjct: 264 CAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNILK 310
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 58.5 bits (140), Expect = 3e-09
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 98 LCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLC 139
LC VC+ DF+ R L + PC H FH KC+ KWL+ + CP+C
Sbjct: 379 LCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 58.5 bits (140), Expect = 3e-09
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 98 LCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLC 139
LC VC+ DF+ R L + PC H FH KC+ KWL+ + CP+C
Sbjct: 379 LCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 58.5 bits (140), Expect = 3e-09
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 98 LCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLC 139
LC VC+ DF+ R L + PC H FH KC+ KWL+ + CP+C
Sbjct: 412 LCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 453
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 58.5 bits (140), Expect = 3e-09
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 98 LCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLC 139
LC VC+ DF+ R L + PC H FH KC+ KWL+ + CP+C
Sbjct: 379 LCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 420
>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
Length = 515
Score = 58.5 bits (140), Expect = 3e-09
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 98 LCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLC 139
LC VC+ DF+ R L + PC H FH KC+ KWL+ + CP+C
Sbjct: 462 LCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC 503
>gi|63025220 ring finger protein 215 [Homo sapiens]
Length = 377
Score = 58.5 bits (140), Expect = 3e-09
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 97 ELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVL 144
E CAVCL+ F + L + PCKH FHR C+ WL +++ CPLC VL
Sbjct: 323 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL 370
>gi|21040269 ring finger protein 133 [Homo sapiens]
Length = 376
Score = 57.4 bits (137), Expect = 6e-09
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 69 RLRHQAHKEFYAYKQVILKEKVKELNLH-ELCAVCLEDFKPRDELGICPCKHAFHRKCLI 127
RL F + ++KE +E+N + + C +C E +KP D + I CKH FH+ C+
Sbjct: 225 RLTTDLQNTFGQLQLRVVKEGDEEINPNGDSCVICFERYKPNDIVRILTCKHFFHKNCID 284
Query: 128 KWLEVRKVCPLCNMPVLQLAQLHSKQDRG 156
W+ CP+C +L++ + + G
Sbjct: 285 PWILPHGTCPICKCDILKVLGIQVVVENG 313
>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
Length = 428
Score = 56.6 bits (135), Expect = 1e-08
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 69 RLRHQAHKEFYAYKQVILKEKVKELNLH-ELCAVCLEDFKPRDELGICPCKHAFHRKCLI 127
+L+ A K + LK+ KE+ + CAVC+E +KP D + I C H FH+ C+
Sbjct: 246 QLKADAKKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVD 305
Query: 128 KWLEVRKVCPLCNMPVLQLAQLHSKQDRGPPQGPLPGAENI 168
WL + CP+C +L+ + + G +P + I
Sbjct: 306 PWLLEHRTCPMCKCDILKALGIEVDVEDGSVSLQVPVSNEI 346
>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
Length = 402
Score = 56.6 bits (135), Expect = 1e-08
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 69 RLRHQAHKEFYAYKQVILKEKVKELNLH-ELCAVCLEDFKPRDELGICPCKHAFHRKCLI 127
+L+ A K + LK+ KE+ + CAVC+E +KP D + I C H FH+ C+
Sbjct: 220 QLKADAKKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVD 279
Query: 128 KWLEVRKVCPLCNMPVLQLAQLHSKQDRGPPQGPLPGAENI 168
WL + CP+C +L+ + + G +P + I
Sbjct: 280 PWLLEHRTCPMCKCDILKALGIEVDVEDGSVSLQVPVSNEI 320
>gi|21389515 ring finger protein 145 [Homo sapiens]
Length = 691
Score = 55.8 bits (133), Expect = 2e-08
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 84 VILKEKVKELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPV 143
+ KE++++ N ++CA+C +D K I PC H FH CL KWL V++ CPLC+ +
Sbjct: 552 IATKEQLEKHN--DICAICYQDMK---SAVITPCSHFFHAGCLKKWLYVQETCPLCHCHL 606
Query: 144 LQLAQLHSKQDRGPPQGPLPGAENIV 169
+QL P P GAE V
Sbjct: 607 KNSSQLPGLGTE-PVLQPHAGAEQNV 631
>gi|56711322 ring finger protein 43 [Homo sapiens]
Length = 783
Score = 55.1 bits (131), Expect = 3e-08
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 98 LCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLC 139
+CA+CLE+F EL + C H FHR C+ WL + CPLC
Sbjct: 271 VCAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLC 312
>gi|150170725 zinc and ring finger 4 [Homo sapiens]
Length = 429
Score = 55.1 bits (131), Expect = 3e-08
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 87 KEKVKELNLH-ELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLE--VRKVCPLCNMPV 143
K +V+ H +LCA+CL++++ D+L I PC H +H KC+ W R+ CP+C V
Sbjct: 296 KAQVRTFTWHNDLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSV 355
>gi|5174653 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 53.9 bits (128), Expect = 6e-08
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 95 LHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVL 144
L ++C+VC+ D+ ++L PC H FH C+ +WL CP+C PVL
Sbjct: 628 LGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|34305295 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 53.9 bits (128), Expect = 6e-08
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 95 LHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVL 144
L ++C+VC+ D+ ++L PC H FH C+ +WL CP+C PVL
Sbjct: 628 LGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|34305293 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 53.9 bits (128), Expect = 6e-08
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 95 LHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVL 144
L ++C+VC+ D+ ++L PC H FH C+ +WL CP+C PVL
Sbjct: 628 LGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|150378447 zinc and ring finger 3 [Homo sapiens]
Length = 836
Score = 53.5 bits (127), Expect = 8e-08
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 99 CAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQ 145
CA+CLE + +EL + PC H FHRKC+ WL CP C +++
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIE 239
>gi|33859668 Rabring 7 [Homo sapiens]
Length = 304
Score = 53.1 bits (126), Expect = 1e-07
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 99 CAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLC 139
C VC ED+ +E+ PC H FH C++ WLE+ CP+C
Sbjct: 228 CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVC 268
>gi|109240538 polycomb group ring finger 1 [Homo sapiens]
Length = 259
Score = 52.4 bits (124), Expect = 2e-07
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 86 LKEKVKELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQ 145
++ K+K+LN H +C +C F D I C H F + C++K+L+ K CP+CN+ + +
Sbjct: 34 VRVKIKDLNEHIVCCLCAGYFV--DATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHE 91
Query: 146 LAQ-LHSKQDR 155
L+ K DR
Sbjct: 92 TQPLLNLKLDR 102
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.145 0.470
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,393,007
Number of Sequences: 37866
Number of extensions: 321991
Number of successful extensions: 1373
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 1242
Number of HSP's gapped (non-prelim): 213
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.