Guide to the Human Genome
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Name: NT5DC2 Sequence: fasta or formatted (557aa) NCBI GI: 197116386
Description:

5'-nucleotidase domain containing 2 isoform 1

Referenced in:

Nucleotide Pathways

Other entries for this name:
alt prot [520aa] 5'-nucleotidase domain containing 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         41           3
 C cysteine            1.8         10           1
 D aspartate           6.5         36           1
 E glutamate           4.7         26           2
 F phenylalanine       5.2         29           2
 G glycine             7.0         39           2
 H histidine           3.6         20           1
 I isoleucine          5.0         28           2
 K lysine              3.6         20           1
 L leucine            11.1         62           2
 M methionine          3.2         18           1
 N asparagine          1.8         10           2
 P proline             5.7         32           2
 Q glutamine           4.8         27           2
 R arginine            7.7         43           2
 S serine              5.4         30           3
 T threonine           4.1         23           1
 V valine              4.3         24           2
 W tryptophan          1.8         10           1
 Y tyrosine            5.2         29           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   5'-nucleotidase domain containing 2 isoform 1 [Homo... 
NT5DC2                0.853   5'-nucleotidase domain containing 2 isoform 2 
NT5DC3                0.590   5'-nucleotidase domain containing 3 
NT5C2                 0.129   5'-nucleotidase, cytosolic II 
NT5C2                 0.129   5'-nucleotidase, cytosolic II 
NT5DC4                0.106   PREDICTED: 5'-nucleotidase domain containing 4 [Hom...
NT5DC4                0.106   PREDICTED: 5'-nucleotidase domain containing 4 [Hom...
NT5DC4                0.106   PREDICTED: 5'-nucleotidase domain containing 4 [Hom...
NT5DC1                0.064   5'-nucleotidase, cytosolic II-like 1 protein 
FOXO1                 0.010   forkhead box O1 
OAS3                  0.009   2'-5'oligoadenylate synthetase 3 
LOC100129979          0.008   PREDICTED: similar to FLJ00287 protein 
COL18A1               0.007   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
COL18A1               0.007   alpha 1 type XVIII collagen isoform 2 precursor [Ho...
COL18A1               0.007   alpha 1 type XVIII collagen isoform 1 precursor [Ho...
FAM83A                0.007   hypothetical protein LOC84985 isoform a 
BHLHE23               0.006   basic helix-loop-helix domain containing, class B, 4...
CHCHD10               0.006   coiled-coil-helix-coiled-coil-helix domain containin...
SF3A2                 0.006   splicing factor 3a, subunit 2 
FAM148B               0.006   nuclear localized factor 2 
MEX3A                 0.006   MEX3A protein 
COL1A1                0.006   alpha 1 type I collagen preproprotein 
HOXD11                0.006   homeobox D11 
NOL3                  0.006   nucleolar protein 3 
DGKQ                  0.006   diacylglycerol kinase, theta 
ANTXR1                0.006   anthrax toxin receptor 1 isoform 1 precursor 
TRIM71                0.006   tripartite motif-containing 71 
KAT2B                 0.005   K(lysine) acetyltransferase 2B 
ANO8                  0.005   anoctamin 8 
LOC100290436          0.005   PREDICTED: hypothetical protein XP_002347616 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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