Guide to the Human Genome
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Name: NT5DC4 Sequence: fasta or formatted (718aa) NCBI GI: 169163021
Description:

PREDICTED: 5'-nucleotidase domain containing 4

Referenced in:

Nucleotide Pathways

Other entries for this name:
alt prot [718aa] PREDICTED: 5'-nucleotidase domain containing 4
alt prot [467aa] PREDICTED: 5'-nucleotidase domain containing 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         44           2
 C cysteine            4.3         31           1
 D aspartate           4.7         34           2
 E glutamate           6.0         43           2
 F phenylalanine       4.6         33           2
 G glycine             6.1         44           2
 H histidine           2.8         20           1
 I isoleucine          3.6         26           1
 K lysine              4.7         34           2
 L leucine            12.5         90           3
 M methionine          2.4         17           1
 N asparagine          3.2         23           2
 P proline             4.9         35           2
 Q glutamine           3.6         26           1
 R arginine            5.0         36           2
 S serine              8.5         61           2
 T threonine           5.7         41           1
 V valine              6.0         43           2
 W tryptophan          1.5         11           2
 Y tyrosine            3.6         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: 5'-nucleotidase domain containing 4 [Hom... 
NT5DC4                0.998   PREDICTED: 5'-nucleotidase domain containing 4 [Hom...
NT5DC4                0.624   PREDICTED: 5'-nucleotidase domain containing 4 [Hom...
NT5C2                 0.341   5'-nucleotidase, cytosolic II 
NT5C2                 0.341   5'-nucleotidase, cytosolic II 
NT5DC3                0.089   5'-nucleotidase domain containing 3 
NT5DC2                0.082   5'-nucleotidase domain containing 2 isoform 1 [Homo...
NT5DC2                0.082   5'-nucleotidase domain containing 2 isoform 2 
NT5DC1                0.042   5'-nucleotidase, cytosolic II-like 1 protein 
STAB1                 0.008   stabilin 1 precursor 
APC2                  0.007   adenomatosis polyposis coli 2 
FAM98C                0.005   hypothetical protein LOC147965 
MUC5AC                0.005   mucin 5AC 
MUC5B                 0.005   mucin 5, subtype B, tracheobronchial 
METTL8                0.005   methyltransferase like 8 
CEP290                0.003   centrosomal protein 290kDa 
CADPS2                0.003   Ca2+-dependent activator protein for secretion 2 is...
CADPS2                0.003   Ca2+-dependent activator protein for secretion 2 is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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