Guide to the Human Genome
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Name: OAS3 Sequence: fasta or formatted (1087aa) NCBI GI: 45007007
Description:

2'-5'oligoadenylate synthetase 3

Referenced in:

Interferon

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         91           3
 C cysteine            2.9         31           2
 D aspartate           4.9         53           1
 E glutamate           4.8         52           1
 F phenylalanine       4.3         47           1
 G glycine             7.1         77           2
 H histidine           1.8         20           1
 I isoleucine          3.5         38           2
 K lysine              5.2         57           2
 L leucine            11.6        126           2
 M methionine          1.4         15           1
 N asparagine          3.2         35           1
 P proline             6.5         71           2
 Q glutamine           7.0         76           2
 R arginine            5.9         64           2
 S serine              6.5         71           2
 T threonine           4.0         44           1
 V valine              6.4         70           2
 W tryptophan          2.4         26           2
 Y tyrosine            2.1         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   2'-5'oligoadenylate synthetase 3 
OAS2                  0.249   2'-5'-oligoadenylate synthetase 2 isoform 2 
OAS2                  0.249   2'-5'-oligoadenylate synthetase 2 isoform 1 
OAS1                  0.165   2',5'-oligoadenylate synthetase 1 isoform 3 
OAS1                  0.165   2',5'-oligoadenylate synthetase 1 isoform 1 
OAS1                  0.165   2',5'-oligoadenylate synthetase 1 isoform 2 
OASL                  0.109   2'-5'-oligoadenylate synthetase-like isoform a [Homo...
OASL                  0.055   2'-5'-oligoadenylate synthetase-like isoform b [Homo...
OAS2                  0.021   2'-5'-oligoadenylate synthetase 2 isoform 3 
MYT1                  0.005   myelin transcription factor 1 
SMARCAL1              0.005   SWI/SNF-related matrix-associated actin-dependent re...
SMARCAL1              0.005   SWI/SNF-related matrix-associated actin-dependent r...
TNKS1BP1              0.005   tankyrase 1-binding protein 1 
NT5DC2                0.005   5'-nucleotidase domain containing 2 isoform 1 [Homo...
BCL9L                 0.005   B-cell CLL/lymphoma 9-like 
KIAA1602              0.004   hypothetical protein LOC57701 
HOXD13                0.004   homeobox D13 
LOC100129890          0.003   PREDICTED: hypothetical protein 
LOC100129890          0.003   PREDICTED: hypothetical protein 
ZNF385C               0.003   PREDICTED: zinc finger protein 385C 
ZNF385C               0.003   PREDICTED: zinc finger protein 385C 
ZNF385C               0.003   PREDICTED: zinc finger protein 385C 
RAX                   0.003   retina and anterior neural fold homeobox 
C1orf226              0.003   hypothetical protein LOC400793 isoform 2 
C1orf226              0.003   hypothetical protein LOC400793 isoform 1 
DNM3                  0.003   dynamin 3 isoform a 
DNM3                  0.003   dynamin 3 isoform b 
MAMSTR                0.003   MEF2 activating motif and SAP domain containing tra...
MAMSTR                0.003   MEF2 activating motif and SAP domain containing tran...
C15orf55              0.003   nuclear protein in testis 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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