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Search of human proteins with 19557645
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19557645 secretogranin III [Homo sapiens]
(468 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19557645 secretogranin III [Homo sapiens] 928 0.0
gi|110815815 centlein isoform 1 [Homo sapiens] 44 4e-04
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens] 41 0.002
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens] 41 0.002
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 41 0.003
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 41 0.003
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 41 0.003
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 41 0.003
gi|71061468 centromere protein E [Homo sapiens] 40 0.003
gi|41281453 serine/threonine kinase 2 [Homo sapiens] 40 0.006
gi|226497734 RNA binding motif protein 19 [Homo sapiens] 39 0.008
gi|226497654 RNA binding motif protein 19 [Homo sapiens] 39 0.008
gi|226497574 RNA binding motif protein 19 [Homo sapiens] 39 0.008
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 39 0.010
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 38 0.017
gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithor... 38 0.023
gi|26080431 ATPase family, AAA domain containing 5 [Homo sapiens] 37 0.029
gi|197313718 IQ motif containing G [Homo sapiens] 37 0.029
gi|14165288 IQ motif containing G [Homo sapiens] 37 0.029
gi|45439327 periplakin [Homo sapiens] 37 0.029
gi|118498362 kinectin 1 isoform b [Homo sapiens] 37 0.050
gi|32484979 adaptor-related protein complex 3, beta 1 subunit [H... 35 0.11
gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo ... 35 0.11
gi|41872583 Rho-associated, coiled-coil containing protein kinas... 35 0.11
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 35 0.11
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 35 0.15
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 35 0.15
gi|56961680 coiled-coil domain containing 147 [Homo sapiens] 35 0.15
gi|203097003 Rho GTPase activating protein 21 [Homo sapiens] 35 0.19
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 34 0.25
>gi|19557645 secretogranin III [Homo sapiens]
Length = 468
Score = 928 bits (2399), Expect = 0.0
Identities = 468/468 (100%), Positives = 468/468 (100%)
Query: 1 MGFLGTGTWILVLVLPIQAFPKPGGSQDKSLHNRELSAERPLNEQIAEAEEDKIKKTYPP 60
MGFLGTGTWILVLVLPIQAFPKPGGSQDKSLHNRELSAERPLNEQIAEAEEDKIKKTYPP
Sbjct: 1 MGFLGTGTWILVLVLPIQAFPKPGGSQDKSLHNRELSAERPLNEQIAEAEEDKIKKTYPP 60
Query: 61 ENKPGQSNYSFVDNLNLLKAITEKEKIEKERQSIRSSPLDNKLNVEDVDSTKNRKLIDDY 120
ENKPGQSNYSFVDNLNLLKAITEKEKIEKERQSIRSSPLDNKLNVEDVDSTKNRKLIDDY
Sbjct: 61 ENKPGQSNYSFVDNLNLLKAITEKEKIEKERQSIRSSPLDNKLNVEDVDSTKNRKLIDDY 120
Query: 121 DSTKSGLDHKFQDDPDGLHQLDGTPLTAEDIVHKIAARIYEENDRAVFDKIVSKLLNLGL 180
DSTKSGLDHKFQDDPDGLHQLDGTPLTAEDIVHKIAARIYEENDRAVFDKIVSKLLNLGL
Sbjct: 121 DSTKSGLDHKFQDDPDGLHQLDGTPLTAEDIVHKIAARIYEENDRAVFDKIVSKLLNLGL 180
Query: 181 ITESQAHTLEDEVAEVLQKLISKEANNYEEDPNKPTSWTENQAGKIPEKVTPMAAIQDGL 240
ITESQAHTLEDEVAEVLQKLISKEANNYEEDPNKPTSWTENQAGKIPEKVTPMAAIQDGL
Sbjct: 181 ITESQAHTLEDEVAEVLQKLISKEANNYEEDPNKPTSWTENQAGKIPEKVTPMAAIQDGL 240
Query: 241 AKGENDETVSNTLTLTNGLERRTKTYSEDNFEELQYFPNFYALLKSIDSEKEAKEKETLI 300
AKGENDETVSNTLTLTNGLERRTKTYSEDNFEELQYFPNFYALLKSIDSEKEAKEKETLI
Sbjct: 241 AKGENDETVSNTLTLTNGLERRTKTYSEDNFEELQYFPNFYALLKSIDSEKEAKEKETLI 300
Query: 301 TIMKTLIDFVKMMVKYGTISPEEGVSYLENLDEMIALQTKNKLEKNATDNISKLFPAPSE 360
TIMKTLIDFVKMMVKYGTISPEEGVSYLENLDEMIALQTKNKLEKNATDNISKLFPAPSE
Sbjct: 301 TIMKTLIDFVKMMVKYGTISPEEGVSYLENLDEMIALQTKNKLEKNATDNISKLFPAPSE 360
Query: 361 KSHEETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIRKNIEWLK 420
KSHEETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIRKNIEWLK
Sbjct: 361 KSHEETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIRKNIEWLK 420
Query: 421 KHDKKGNKEDYDLSKMRDFINKQADAYVEKGILDKEEAEAIKRIYSSL 468
KHDKKGNKEDYDLSKMRDFINKQADAYVEKGILDKEEAEAIKRIYSSL
Sbjct: 421 KHDKKGNKEDYDLSKMRDFINKQADAYVEKGILDKEEAEAIKRIYSSL 468
>gi|110815815 centlein isoform 1 [Homo sapiens]
Length = 1406
Score = 43.5 bits (101), Expect = 4e-04
Identities = 75/317 (23%), Positives = 139/317 (43%), Gaps = 23/317 (7%)
Query: 74 NLNLLKAITEKEKIEKERQSIRSSPLDNKLNVEDVDSTKNRKLIDDYDSTKSGLDH---K 130
+L+ + T+ E+++K R++ R ++N + S +N +L D ++ K L
Sbjct: 515 SLSPKSSFTDSEELQKLRKAERK--IENLEKALQLKSQENDELRDAHEKRKERLQMLQTN 572
Query: 131 FQDDPDGLHQLD-GTPLTA-EDIVHKIAARIYEENDRAVFDKIVS-KLLNLGLITESQAH 187
++ + L Q + G+ +T I ++ +E+ AV++++ K N L+ +
Sbjct: 573 YRAVKEQLKQWEEGSGMTEIRKIKRADPQQLRQEDSDAVWNELAYFKRENQELMIQKM-- 630
Query: 188 TLEDEVAEVLQKLISKEANNYEEDPNKPTSWTENQAGKIPEKVTPMAAIQDGLAKGENDE 247
LE+E+ E L+ IS + +E E Q + E + + K ++
Sbjct: 631 NLEEELDE-LKVHISIDKAAIQELNRCVAERREEQLFRSGEDDEVKRSTPEKNGKEMLEQ 689
Query: 248 TVSNTLTLTNGL---ERRTKTYSEDNFEELQYFPNFYALLKSIDSEKEAKEKETLITIMK 304
T+ L N L E+R++ E N + ++ +LLK + E +EKE ++
Sbjct: 690 TLQKVTELENRLKSFEKRSRKLKEGNKKLMKENDFLKSLLKQQQEDTETREKE-----LE 744
Query: 305 TLIDFVKMMVKYGTISPEEGVSYLENLDEMIALQTKNKLEKNATDNISKLFPAPSEKSHE 364
+I K + K T E V E E+ +L+ + E NA N ++ P EKSH+
Sbjct: 745 QIIKGSKDVEKENT---ELQVKISELETEVTSLR-RQVAEANALRNENEELINPMEKSHQ 800
Query: 365 ETDSTKEEAAKMEKEYG 381
D K E A M+ G
Sbjct: 801 SADRAKSEMATMKVRSG 817
>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
Length = 2039
Score = 41.2 bits (95), Expect = 0.002
Identities = 45/183 (24%), Positives = 84/183 (45%), Gaps = 14/183 (7%)
Query: 285 KSIDSEKEAKEKETLITIMKTLIDFVKMMVKYGTISPEEGVSYLENLD-EMIALQTKNKL 343
K I+ EKE + + ++ ++F + K +E N++ E + L+ K+KL
Sbjct: 644 KEIEGEKEKYKTKDSAKELQRSVEFDREFWKENFFKSDETEDLFLNMEHESLTLEKKSKL 703
Query: 344 EKNATDNISKLFPAPSEKSH--EETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEP 401
EKN D+ S S++ + EE D K+E+ K +E +KD ++ + P TD+
Sbjct: 704 EKNIKDDKSTKEKHVSKERNFKEERDKIKKESEKSFRE-EKIKDLKEERENIP---TDKD 759
Query: 402 KGKTEAYLEAIRKNI-------EWLKKHDKKGNKEDYDLSKMRDFINKQADAYVEKGILD 454
T + AI ++I E + +K KE + + R I ++ +E+ +
Sbjct: 760 SEFTSLGMSAIEESIGLHLVEKEIDIEKQEKHIKESKEKPEKRSQIKEKDIEKMERKTFE 819
Query: 455 KEE 457
KE+
Sbjct: 820 KEK 822
Score = 35.4 bits (80), Expect = 0.11
Identities = 86/407 (21%), Positives = 163/407 (40%), Gaps = 52/407 (12%)
Query: 83 EKEKIEK-------ERQSIRSSPLDNKLNVEDVDSTKNRKLIDDYDSTKSGLDHKFQDDP 135
EK K +K E+ + + D+ E+ D T + + K L HK ++
Sbjct: 581 EKSKHQKDFHLEFGEKSNAKIKDEDHSPTFENSDCTLKKMDKEGKTLKKHKLKHKEREKE 640
Query: 136 DGLHQLDG------TPLTAEDIVHKIAA-RIYEENDRAVFDKIVSKLLNLGLITESQAHT 188
+++G T +A+++ + R + + + D+ LN+ E ++ T
Sbjct: 641 KHKKEIEGEKEKYKTKDSAKELQRSVEFDREFWKENFFKSDETEDLFLNM----EHESLT 696
Query: 189 LEDEVAEVLQKLISKEANNYEEDPNKPTSWTE--NQAGKIPEKVTPMAAIQDGLAKGEND 246
LE + L+K I + + E+ +K ++ E ++ K EK I+D + EN
Sbjct: 697 LEKK--SKLEKNIKDDKSTKEKHVSKERNFKEERDKIKKESEKSFREEKIKDLKEERENI 754
Query: 247 ETVSNTLTLTNGLERRTKTYSEDNFEELQYFPNFYALLKSIDSEK------EAKEKETLI 300
T ++ + G+ ++ + + K ID EK E+KEK
Sbjct: 755 PTDKDSEFTSLGMSAIEESIG------------LHLVEKEIDIEKQEKHIKESKEKPEKR 802
Query: 301 TIMKTLIDFVKMMVKYGTISPEEGVSYLENLDEMIALQTKNKLEKNATDNISKLFPAPSE 360
+ +K D KM K T E+ + + E+ E L ++K + KL+ +E
Sbjct: 803 SQIKEK-DIEKMERK--TFEKEKKIKH-EHKSEKDKLDLSECVDKIKEKD--KLYSHHTE 856
Query: 361 KSHEETDSTKEEAA---KMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIRK--- 414
K H+E + +K AA ++E K K D P + + K + +E K
Sbjct: 857 KCHKEGEKSKNTAAIKKTDDREKSREKMDRKHDKEKPEKERHLAESKEKHLMEKKNKQSD 916
Query: 415 NIEWLKKHDKKGNKEDYDLSKMRDFINKQADAYVEKGILDKEEAEAI 461
N E+ K K ++D +L K +K++ + +E+ +I
Sbjct: 917 NSEYSKSEKGKNKEKDRELDKKEKSRDKESINITNSKHIQEEKKSSI 963
Score = 29.6 bits (65), Expect = 6.1
Identities = 58/286 (20%), Positives = 109/286 (38%), Gaps = 49/286 (17%)
Query: 31 LHNRELSAERPLNEQIAEAEEDKIKKTYPPENKPGQSN--------YSFVDNLNLL---- 78
++ + L + PL++ + D +K P Q+N + + L LL
Sbjct: 221 VNTQGLDDDTPLHDSASSGHRDIVKLLLRHGGNPFQANKHGERPVDVAETEELELLLKRE 280
Query: 79 -------KAITEKEKIEKERQSIRSSPLDNKLNVE-DVDST--KNRKLIDDYDSTKSGLD 128
++ T+ E E QS+ S +D ++ E + DS ++++++ S LD
Sbjct: 281 VPLSDDDESYTDSE----EAQSVNPSSVDENIDSETEKDSLICESKQILPSKTPLPSALD 336
Query: 129 -HKFQDDPDGL--HQLDGTPLTA-----EDIVHKIAARIYEENDRAVFDK-IVSKLLNLG 179
++F+DD D +D + E+ ++ + ++A + K SK
Sbjct: 337 EYEFKDDDDEEINKMIDDRHILRKEQRKENEPEAEKTHLFAKQEKAFYPKSFKSKKQKPS 396
Query: 180 LITESQAHTLEDEVAEVLQKLISKEANNYEEDPNKP--------TSWTENQAGKIPEKVT 231
+ S + ++E + K IS + E N S Q GK+ K+
Sbjct: 397 RVLYSSTESSDEEALQ--NKKISTSCSVIPETSNSDMQTKKEYVVSGEHKQKGKVKRKLK 454
Query: 232 PMAAIQDGLAKGENDETVSNT----LTLTNGLERRTKTYSEDNFEE 273
++ + E NT LT+ GL+ KT E NF +
Sbjct: 455 NQNKNKENQELKQEKEGKENTRITNLTVNTGLDCSEKTREEGNFRK 500
>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
Length = 2062
Score = 41.2 bits (95), Expect = 0.002
Identities = 45/183 (24%), Positives = 84/183 (45%), Gaps = 14/183 (7%)
Query: 285 KSIDSEKEAKEKETLITIMKTLIDFVKMMVKYGTISPEEGVSYLENLD-EMIALQTKNKL 343
K I+ EKE + + ++ ++F + K +E N++ E + L+ K+KL
Sbjct: 667 KEIEGEKEKYKTKDSAKELQRSVEFDREFWKENFFKSDETEDLFLNMEHESLTLEKKSKL 726
Query: 344 EKNATDNISKLFPAPSEKSH--EETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEP 401
EKN D+ S S++ + EE D K+E+ K +E +KD ++ + P TD+
Sbjct: 727 EKNIKDDKSTKEKHVSKERNFKEERDKIKKESEKSFRE-EKIKDLKEERENIP---TDKD 782
Query: 402 KGKTEAYLEAIRKNI-------EWLKKHDKKGNKEDYDLSKMRDFINKQADAYVEKGILD 454
T + AI ++I E + +K KE + + R I ++ +E+ +
Sbjct: 783 SEFTSLGMSAIEESIGLHLVEKEIDIEKQEKHIKESKEKPEKRSQIKEKDIEKMERKTFE 842
Query: 455 KEE 457
KE+
Sbjct: 843 KEK 845
Score = 35.4 bits (80), Expect = 0.11
Identities = 86/407 (21%), Positives = 163/407 (40%), Gaps = 52/407 (12%)
Query: 83 EKEKIEK-------ERQSIRSSPLDNKLNVEDVDSTKNRKLIDDYDSTKSGLDHKFQDDP 135
EK K +K E+ + + D+ E+ D T + + K L HK ++
Sbjct: 604 EKSKHQKDFHLEFGEKSNAKIKDEDHSPTFENSDCTLKKMDKEGKTLKKHKLKHKEREKE 663
Query: 136 DGLHQLDG------TPLTAEDIVHKIAA-RIYEENDRAVFDKIVSKLLNLGLITESQAHT 188
+++G T +A+++ + R + + + D+ LN+ E ++ T
Sbjct: 664 KHKKEIEGEKEKYKTKDSAKELQRSVEFDREFWKENFFKSDETEDLFLNM----EHESLT 719
Query: 189 LEDEVAEVLQKLISKEANNYEEDPNKPTSWTE--NQAGKIPEKVTPMAAIQDGLAKGEND 246
LE + L+K I + + E+ +K ++ E ++ K EK I+D + EN
Sbjct: 720 LEKK--SKLEKNIKDDKSTKEKHVSKERNFKEERDKIKKESEKSFREEKIKDLKEERENI 777
Query: 247 ETVSNTLTLTNGLERRTKTYSEDNFEELQYFPNFYALLKSIDSEK------EAKEKETLI 300
T ++ + G+ ++ + + K ID EK E+KEK
Sbjct: 778 PTDKDSEFTSLGMSAIEESIG------------LHLVEKEIDIEKQEKHIKESKEKPEKR 825
Query: 301 TIMKTLIDFVKMMVKYGTISPEEGVSYLENLDEMIALQTKNKLEKNATDNISKLFPAPSE 360
+ +K D KM K T E+ + + E+ E L ++K + KL+ +E
Sbjct: 826 SQIKEK-DIEKMERK--TFEKEKKIKH-EHKSEKDKLDLSECVDKIKEKD--KLYSHHTE 879
Query: 361 KSHEETDSTKEEAA---KMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIRK--- 414
K H+E + +K AA ++E K K D P + + K + +E K
Sbjct: 880 KCHKEGEKSKNTAAIKKTDDREKSREKMDRKHDKEKPEKERHLAESKEKHLMEKKNKQSD 939
Query: 415 NIEWLKKHDKKGNKEDYDLSKMRDFINKQADAYVEKGILDKEEAEAI 461
N E+ K K ++D +L K +K++ + +E+ +I
Sbjct: 940 NSEYSKSEKGKNKEKDRELDKKEKSRDKESINITNSKHIQEEKKSSI 986
Score = 29.6 bits (65), Expect = 6.1
Identities = 58/286 (20%), Positives = 109/286 (38%), Gaps = 49/286 (17%)
Query: 31 LHNRELSAERPLNEQIAEAEEDKIKKTYPPENKPGQSN--------YSFVDNLNLL---- 78
++ + L + PL++ + D +K P Q+N + + L LL
Sbjct: 244 VNTQGLDDDTPLHDSASSGHRDIVKLLLRHGGNPFQANKHGERPVDVAETEELELLLKRE 303
Query: 79 -------KAITEKEKIEKERQSIRSSPLDNKLNVE-DVDST--KNRKLIDDYDSTKSGLD 128
++ T+ E E QS+ S +D ++ E + DS ++++++ S LD
Sbjct: 304 VPLSDDDESYTDSE----EAQSVNPSSVDENIDSETEKDSLICESKQILPSKTPLPSALD 359
Query: 129 -HKFQDDPDGL--HQLDGTPLTA-----EDIVHKIAARIYEENDRAVFDK-IVSKLLNLG 179
++F+DD D +D + E+ ++ + ++A + K SK
Sbjct: 360 EYEFKDDDDEEINKMIDDRHILRKEQRKENEPEAEKTHLFAKQEKAFYPKSFKSKKQKPS 419
Query: 180 LITESQAHTLEDEVAEVLQKLISKEANNYEEDPNKP--------TSWTENQAGKIPEKVT 231
+ S + ++E + K IS + E N S Q GK+ K+
Sbjct: 420 RVLYSSTESSDEEALQ--NKKISTSCSVIPETSNSDMQTKKEYVVSGEHKQKGKVKRKLK 477
Query: 232 PMAAIQDGLAKGENDETVSNT----LTLTNGLERRTKTYSEDNFEE 273
++ + E NT LT+ GL+ KT E NF +
Sbjct: 478 NQNKNKENQELKQEKEGKENTRITNLTVNTGLDCSEKTREEGNFRK 523
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 40.8 bits (94), Expect = 0.003
Identities = 74/341 (21%), Positives = 138/341 (40%), Gaps = 32/341 (9%)
Query: 149 EDIVHKIAARIYEENDR-----AVFDKIVSKLLNLGLITES-----QAHTLEDEVAEVLQ 198
E+I+H++ AR+ EE DR A K+ ++L+L E Q LE AE
Sbjct: 921 EEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKI 980
Query: 199 KLISKEANNYEEDPNKPTSWTENQAGKIPEKVTPMAAIQD---GLAKGEN-DETVSNTLT 254
K + E ++ NK + + +I + T +A ++ L K +N E++ + L
Sbjct: 981 KKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLKNKHESMISELE 1040
Query: 255 L--------TNGLERRTKTYSEDNFEELQYFPNFYALLKSIDSEKEAKEKETLITIMKTL 306
+ LE+ + D + + + A + + + KE+E + +
Sbjct: 1041 VRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLD 1100
Query: 307 IDFVKMMVKYGTISPEEG-VSYL-ENLDEMIALQTKNKLEKNATDNISKLFPAPSEKSHE 364
+ + I EG +S L E+LD A + K + +K + E + +
Sbjct: 1101 DEIAQKNNALKKIRELEGHISDLQEDLDSERAARNKAEKQKRDLGEELEALKTELEDTLD 1160
Query: 365 ETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIRKNIEWLKKHDK 424
T + +E AK E+E LK + ++ + + E + K +E + + +E K+
Sbjct: 1161 STATQQELRAKREQEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRAKA 1220
Query: 425 KGNKEDYDLSKMRDFINKQADAYVEKGILD--KEEAEAIKR 463
+K L K + AD E +L K+E E K+
Sbjct: 1221 NLDKNKQTLEK------ENADLAGELRVLGQAKQEVEHKKK 1255
Score = 40.8 bits (94), Expect = 0.003
Identities = 72/345 (20%), Positives = 137/345 (39%), Gaps = 28/345 (8%)
Query: 48 EAEEDKIKKTYPPENKPGQSNYSFVDNLNLLKAITEKEKIEKERQSIRSSPLDNKLNVED 107
E EED+ ++ K Q + L +A +K ++EK + L++++ V D
Sbjct: 932 EEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDEILVMD 991
Query: 108 VDS---TKNRKLIDDYDSTKSGLDHKFQDDPDGLHQLDGTPLTAEDIVHKIAARI-YEEN 163
+ +K RKL+++ S L ++ + L E ++ ++ R+ EE
Sbjct: 992 DQNNKLSKERKLLEE---RISDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEK 1048
Query: 164 DRAVFDKIVSKLLNLGLITESQAHTLEDEVAEVLQKLISKEANNYEEDPNKPTSWTENQA 223
R +K+ KL Q L+ ++AE+ +L K EE+ + +++
Sbjct: 1049 SRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKK-----EEELQAALARLDDEI 1103
Query: 224 GKIPEKVTPMAAIQDGLAKGENDETVSNTLTLTNGLERRTKTYSEDNFEELQYFPNFYAL 283
+ + + ++ ++ + E + + N E++ + E+ E L+
Sbjct: 1104 AQKNNALKKIRELEGHIS--DLQEDLDSERAARNKAEKQKRDLGEE-LEALK--TELEDT 1158
Query: 284 LKSIDSEKEAKEK-ETLITIMKTLID--------FVKMMVKYGTISPEEGVSYLENLDEM 334
L S +++E + K E +T++K +D V+ M + + EE LE
Sbjct: 1159 LDSTATQQELRAKREQEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRA 1218
Query: 335 IALQTKNK--LEKNATDNISKLFPAPSEKSHEETDSTKEEAAKME 377
A KNK LEK D +L K E K EA E
Sbjct: 1219 KANLDKNKQTLEKENADLAGELRVLGQAKQEVEHKKKKLEAQVQE 1263
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 40.8 bits (94), Expect = 0.003
Identities = 74/341 (21%), Positives = 138/341 (40%), Gaps = 32/341 (9%)
Query: 149 EDIVHKIAARIYEENDR-----AVFDKIVSKLLNLGLITES-----QAHTLEDEVAEVLQ 198
E+I+H++ AR+ EE DR A K+ ++L+L E Q LE AE
Sbjct: 928 EEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKI 987
Query: 199 KLISKEANNYEEDPNKPTSWTENQAGKIPEKVTPMAAIQD---GLAKGEN-DETVSNTLT 254
K + E ++ NK + + +I + T +A ++ L K +N E++ + L
Sbjct: 988 KKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLKNKHESMISELE 1047
Query: 255 L--------TNGLERRTKTYSEDNFEELQYFPNFYALLKSIDSEKEAKEKETLITIMKTL 306
+ LE+ + D + + + A + + + KE+E + +
Sbjct: 1048 VRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLD 1107
Query: 307 IDFVKMMVKYGTISPEEG-VSYL-ENLDEMIALQTKNKLEKNATDNISKLFPAPSEKSHE 364
+ + I EG +S L E+LD A + K + +K + E + +
Sbjct: 1108 DEIAQKNNALKKIRELEGHISDLQEDLDSERAARNKAEKQKRDLGEELEALKTELEDTLD 1167
Query: 365 ETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIRKNIEWLKKHDK 424
T + +E AK E+E LK + ++ + + E + K +E + + +E K+
Sbjct: 1168 STATQQELRAKREQEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRAKA 1227
Query: 425 KGNKEDYDLSKMRDFINKQADAYVEKGILD--KEEAEAIKR 463
+K L K + AD E +L K+E E K+
Sbjct: 1228 NLDKNKQTLEK------ENADLAGELRVLGQAKQEVEHKKK 1262
Score = 40.8 bits (94), Expect = 0.003
Identities = 72/345 (20%), Positives = 137/345 (39%), Gaps = 28/345 (8%)
Query: 48 EAEEDKIKKTYPPENKPGQSNYSFVDNLNLLKAITEKEKIEKERQSIRSSPLDNKLNVED 107
E EED+ ++ K Q + L +A +K ++EK + L++++ V D
Sbjct: 939 EEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDEILVMD 998
Query: 108 VDS---TKNRKLIDDYDSTKSGLDHKFQDDPDGLHQLDGTPLTAEDIVHKIAARI-YEEN 163
+ +K RKL+++ S L ++ + L E ++ ++ R+ EE
Sbjct: 999 DQNNKLSKERKLLEE---RISDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEK 1055
Query: 164 DRAVFDKIVSKLLNLGLITESQAHTLEDEVAEVLQKLISKEANNYEEDPNKPTSWTENQA 223
R +K+ KL Q L+ ++AE+ +L K EE+ + +++
Sbjct: 1056 SRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKK-----EEELQAALARLDDEI 1110
Query: 224 GKIPEKVTPMAAIQDGLAKGENDETVSNTLTLTNGLERRTKTYSEDNFEELQYFPNFYAL 283
+ + + ++ ++ + E + + N E++ + E+ E L+
Sbjct: 1111 AQKNNALKKIRELEGHIS--DLQEDLDSERAARNKAEKQKRDLGEE-LEALK--TELEDT 1165
Query: 284 LKSIDSEKEAKEK-ETLITIMKTLID--------FVKMMVKYGTISPEEGVSYLENLDEM 334
L S +++E + K E +T++K +D V+ M + + EE LE
Sbjct: 1166 LDSTATQQELRAKREQEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRA 1225
Query: 335 IALQTKNK--LEKNATDNISKLFPAPSEKSHEETDSTKEEAAKME 377
A KNK LEK D +L K E K EA E
Sbjct: 1226 KANLDKNKQTLEKENADLAGELRVLGQAKQEVEHKKKKLEAQVQE 1270
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 40.8 bits (94), Expect = 0.003
Identities = 74/341 (21%), Positives = 138/341 (40%), Gaps = 32/341 (9%)
Query: 149 EDIVHKIAARIYEENDR-----AVFDKIVSKLLNLGLITES-----QAHTLEDEVAEVLQ 198
E+I+H++ AR+ EE DR A K+ ++L+L E Q LE AE
Sbjct: 928 EEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKI 987
Query: 199 KLISKEANNYEEDPNKPTSWTENQAGKIPEKVTPMAAIQD---GLAKGEN-DETVSNTLT 254
K + E ++ NK + + +I + T +A ++ L K +N E++ + L
Sbjct: 988 KKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLKNKHESMISELE 1047
Query: 255 L--------TNGLERRTKTYSEDNFEELQYFPNFYALLKSIDSEKEAKEKETLITIMKTL 306
+ LE+ + D + + + A + + + KE+E + +
Sbjct: 1048 VRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLD 1107
Query: 307 IDFVKMMVKYGTISPEEG-VSYL-ENLDEMIALQTKNKLEKNATDNISKLFPAPSEKSHE 364
+ + I EG +S L E+LD A + K + +K + E + +
Sbjct: 1108 DEIAQKNNALKKIRELEGHISDLQEDLDSERAARNKAEKQKRDLGEELEALKTELEDTLD 1167
Query: 365 ETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIRKNIEWLKKHDK 424
T + +E AK E+E LK + ++ + + E + K +E + + +E K+
Sbjct: 1168 STATQQELRAKREQEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRAKA 1227
Query: 425 KGNKEDYDLSKMRDFINKQADAYVEKGILD--KEEAEAIKR 463
+K L K + AD E +L K+E E K+
Sbjct: 1228 NLDKNKQTLEK------ENADLAGELRVLGQAKQEVEHKKK 1262
Score = 40.8 bits (94), Expect = 0.003
Identities = 72/345 (20%), Positives = 137/345 (39%), Gaps = 28/345 (8%)
Query: 48 EAEEDKIKKTYPPENKPGQSNYSFVDNLNLLKAITEKEKIEKERQSIRSSPLDNKLNVED 107
E EED+ ++ K Q + L +A +K ++EK + L++++ V D
Sbjct: 939 EEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDEILVMD 998
Query: 108 VDS---TKNRKLIDDYDSTKSGLDHKFQDDPDGLHQLDGTPLTAEDIVHKIAARI-YEEN 163
+ +K RKL+++ S L ++ + L E ++ ++ R+ EE
Sbjct: 999 DQNNKLSKERKLLEE---RISDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEK 1055
Query: 164 DRAVFDKIVSKLLNLGLITESQAHTLEDEVAEVLQKLISKEANNYEEDPNKPTSWTENQA 223
R +K+ KL Q L+ ++AE+ +L K EE+ + +++
Sbjct: 1056 SRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKK-----EEELQAALARLDDEI 1110
Query: 224 GKIPEKVTPMAAIQDGLAKGENDETVSNTLTLTNGLERRTKTYSEDNFEELQYFPNFYAL 283
+ + + ++ ++ + E + + N E++ + E+ E L+
Sbjct: 1111 AQKNNALKKIRELEGHIS--DLQEDLDSERAARNKAEKQKRDLGEE-LEALK--TELEDT 1165
Query: 284 LKSIDSEKEAKEK-ETLITIMKTLID--------FVKMMVKYGTISPEEGVSYLENLDEM 334
L S +++E + K E +T++K +D V+ M + + EE LE
Sbjct: 1166 LDSTATQQELRAKREQEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRA 1225
Query: 335 IALQTKNK--LEKNATDNISKLFPAPSEKSHEETDSTKEEAAKME 377
A KNK LEK D +L K E K EA E
Sbjct: 1226 KANLDKNKQTLEKENADLAGELRVLGQAKQEVEHKKKKLEAQVQE 1270
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 40.8 bits (94), Expect = 0.003
Identities = 74/341 (21%), Positives = 138/341 (40%), Gaps = 32/341 (9%)
Query: 149 EDIVHKIAARIYEENDR-----AVFDKIVSKLLNLGLITES-----QAHTLEDEVAEVLQ 198
E+I+H++ AR+ EE DR A K+ ++L+L E Q LE AE
Sbjct: 921 EEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKI 980
Query: 199 KLISKEANNYEEDPNKPTSWTENQAGKIPEKVTPMAAIQD---GLAKGEN-DETVSNTLT 254
K + E ++ NK + + +I + T +A ++ L K +N E++ + L
Sbjct: 981 KKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLKNKHESMISELE 1040
Query: 255 L--------TNGLERRTKTYSEDNFEELQYFPNFYALLKSIDSEKEAKEKETLITIMKTL 306
+ LE+ + D + + + A + + + KE+E + +
Sbjct: 1041 VRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLD 1100
Query: 307 IDFVKMMVKYGTISPEEG-VSYL-ENLDEMIALQTKNKLEKNATDNISKLFPAPSEKSHE 364
+ + I EG +S L E+LD A + K + +K + E + +
Sbjct: 1101 DEIAQKNNALKKIRELEGHISDLQEDLDSERAARNKAEKQKRDLGEELEALKTELEDTLD 1160
Query: 365 ETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIRKNIEWLKKHDK 424
T + +E AK E+E LK + ++ + + E + K +E + + +E K+
Sbjct: 1161 STATQQELRAKREQEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRAKA 1220
Query: 425 KGNKEDYDLSKMRDFINKQADAYVEKGILD--KEEAEAIKR 463
+K L K + AD E +L K+E E K+
Sbjct: 1221 NLDKNKQTLEK------ENADLAGELRVLGQAKQEVEHKKK 1255
Score = 40.8 bits (94), Expect = 0.003
Identities = 72/345 (20%), Positives = 137/345 (39%), Gaps = 28/345 (8%)
Query: 48 EAEEDKIKKTYPPENKPGQSNYSFVDNLNLLKAITEKEKIEKERQSIRSSPLDNKLNVED 107
E EED+ ++ K Q + L +A +K ++EK + L++++ V D
Sbjct: 932 EEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDEILVMD 991
Query: 108 VDS---TKNRKLIDDYDSTKSGLDHKFQDDPDGLHQLDGTPLTAEDIVHKIAARI-YEEN 163
+ +K RKL+++ S L ++ + L E ++ ++ R+ EE
Sbjct: 992 DQNNKLSKERKLLEE---RISDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEK 1048
Query: 164 DRAVFDKIVSKLLNLGLITESQAHTLEDEVAEVLQKLISKEANNYEEDPNKPTSWTENQA 223
R +K+ KL Q L+ ++AE+ +L K EE+ + +++
Sbjct: 1049 SRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKK-----EEELQAALARLDDEI 1103
Query: 224 GKIPEKVTPMAAIQDGLAKGENDETVSNTLTLTNGLERRTKTYSEDNFEELQYFPNFYAL 283
+ + + ++ ++ + E + + N E++ + E+ E L+
Sbjct: 1104 AQKNNALKKIRELEGHIS--DLQEDLDSERAARNKAEKQKRDLGEE-LEALK--TELEDT 1158
Query: 284 LKSIDSEKEAKEK-ETLITIMKTLID--------FVKMMVKYGTISPEEGVSYLENLDEM 334
L S +++E + K E +T++K +D V+ M + + EE LE
Sbjct: 1159 LDSTATQQELRAKREQEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRA 1218
Query: 335 IALQTKNK--LEKNATDNISKLFPAPSEKSHEETDSTKEEAAKME 377
A KNK LEK D +L K E K EA E
Sbjct: 1219 KANLDKNKQTLEKENADLAGELRVLGQAKQEVEHKKKKLEAQVQE 1263
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 40.4 bits (93), Expect = 0.003
Identities = 90/472 (19%), Positives = 194/472 (41%), Gaps = 58/472 (12%)
Query: 31 LHNRELSAERPLNEQIAEAEEDKIKK------TYPPENKPGQSNYSFV---DNLNLLKAI 81
++N++L E ++ +ED+IKK + EN +YS D + + +
Sbjct: 568 VYNQDLENELSSKVELLREKEDQIKKLQEYIDSQKLENIKMDLSYSLESIEDPKQMKQTL 627
Query: 82 TEKEKI----EKERQSIRSSPLDNKLNVEDVDSTKNRKLIDDYDSTKSGLDHKFQDDPDG 137
+ E + ++E +RS L+ K ++++ +T +++ +D +S L+ K + D
Sbjct: 628 FDAETVALDAKRESAFLRSENLELKEKMKEL-ATTYKQMENDIQLYQSQLEAKKKMQVDL 686
Query: 138 LHQLDG--------TPLTAEDIVHKIAARIYEENDRAVFDKIVSK------LLNLGLITE 183
+L T L + + + E K ++K L +I
Sbjct: 687 EKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEVILL 746
Query: 184 SQAHTLEDEVAEVLQKLI---SKEANNYEEDPNKPTSWTENQAGKIPEKVTPMAAIQDGL 240
S+ +L EV E L+K I S+E + + +K S ++ ++ + + +D L
Sbjct: 747 SELKSLPSEV-ERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDL 805
Query: 241 AKGEN-----DETVSNTLTLTNGLERRTKTYSEDNFEELQYFPNFYALLKSIDSEKEAKE 295
A ++ D+ N TL E++ K E+N Q N KEA++
Sbjct: 806 ATTQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNL---------SKEAQK 856
Query: 296 KETLITIMKTLIDFVKMMVKYGTISPEEGVSYLENLDEMI-----ALQTKNKLEKNATDN 350
++ + +KT + + ++ T +E ++ +E L E + LQT + + T+
Sbjct: 857 FDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEK 916
Query: 351 ISKLFPAPSEKSHEETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLE 410
+ + + E K++ ++++ +D K D + + + + LE
Sbjct: 917 LQQTLEEVKTLTQE-----KDDLKQLQESLQIERDQLKSDIHDTVNMNIDTQEQLRNALE 971
Query: 411 AIRKNIEWLKKHDKKGNKEDYDLSKMRDFINKQADAYVEK--GILDKEEAEA 460
+++++ E + K ++E M + + D + +K GI K++ EA
Sbjct: 972 SLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQKMVGIDKKQDLEA 1023
>gi|41281453 serine/threonine kinase 2 [Homo sapiens]
Length = 1235
Score = 39.7 bits (91), Expect = 0.006
Identities = 92/428 (21%), Positives = 162/428 (37%), Gaps = 45/428 (10%)
Query: 51 EDKIKKTYPPENKPGQSNYSFVDNLNLLKAITEKEKIEKERQSIRSSPLDNKLNVEDVDS 110
E I+ E + Q +N L+K+ K+ I + + + + N++ VDS
Sbjct: 460 ETNIEHNLKSEEEKDQEKQQMFEN-KLIKSEEIKDTILQTVDLVSQETGEKEANIQAVDS 518
Query: 111 TKNRKLIDDYDSTKSGLDHKFQDDP-DGLHQLDGTPLTAEDIVHKI---AARIYEENDRA 166
L + K G D K Q D + GT A D+ K+ +A + ND
Sbjct: 519 EVG--LTKEDTQEKLGEDDKTQKDVISNTSDVIGT-CEAADVAQKVDEDSAEDTQSNDGK 575
Query: 167 VFDKIVSKLLNLGLITESQAHTLEDEVAEVLQKLISKEANNYEEDPNKPTSWTENQAGKI 226
++ KL+N ++ T E + E++ E N EE NK QA
Sbjct: 576 EVVEVGQKLINKPMVGPEAGGTKEVPIKEIV------EMNEIEEGKNK------EQAINS 623
Query: 227 PEKVTPMAAIQDGLAKGENDETVSNTLTLTNGLERRTKTYSEDNFEELQYFPNFYALLKS 286
E + + + G +GE S+ T +E R+ D + +
Sbjct: 624 SENIMDINE-EPGTTEGEEITESSS----TEEMEVRSVVADTDQKALGSEVQDASKVTTQ 678
Query: 287 IDSEKE----AKEKETLITIMKTLIDFVKMMVKYGTISPEEGVSYLENLDEMIALQTKNK 342
ID EK+ + +KE +T++ + +++ I+ + G EN +E+ +L
Sbjct: 679 IDKEKKEIPVSIKKEPEVTVVSQPTEPQPVLIPSININSDSG----ENKEEIGSLSKTET 734
Query: 343 LEKNATDNISKLFPAPSEKSHEE-TDSTKEEAA-KMEKEYGSLKDSTKDDNSNPGGKTDE 400
+ ++N P E ++ T ST + ++ + S TKD S +T
Sbjct: 735 ILPPESEN-------PKENDNDSGTGSTADTSSIDLNLSISSFLSKTKDSGSISLQETRR 787
Query: 401 PKGKTEAYLEAIRKNIEWLKKHDKKGNKEDYDLSKMRDFINKQADAYVEKGILDKEEAEA 460
K + + I +E K D ++R F+ +Q E L KEE A
Sbjct: 788 QKKTLKKTRKFIVDGVEVSVTTSKIVTDSDSKTEELR-FLRRQ--ELRELRFLQKEEQRA 844
Query: 461 IKRIYSSL 468
+++ S L
Sbjct: 845 QQQLNSKL 852
Score = 33.9 bits (76), Expect = 0.33
Identities = 59/280 (21%), Positives = 108/280 (38%), Gaps = 23/280 (8%)
Query: 173 SKLLNLGLITESQAHTLEDEVAEVLQKLISKEANNYEEDPNKPTSWTENQAGKIPEKVTP 232
S+LL +T + + +AE ++ + + EED + T +P +
Sbjct: 284 SQLLQHPFVTVDSNKPIRELIAEAKAEVTEEVEDGKEEDEEEETE------NSLPIPASK 337
Query: 233 MAAIQDGLAKGENDETVSNTLTLTNGLERRTKTYSED--NFEELQYFPNFYALLKSIDSE 290
A+ +A E D+ N L + E+ ++ SED N + L P K+++
Sbjct: 338 RASSDLSIASSEEDKLSQNACILESVSEKTERSNSEDKLNSKILNEKPTTDEPEKAVEDI 397
Query: 291 KEAKEKETLITIMKTLIDFVKMMVKYGTISPEEGVSYLENLDEMIALQTK--NKLEKNAT 348
E + + M L D ++ + + E LENL + +T N + +
Sbjct: 398 NE-HITDAQLEAMTELHDRTAVIKE----NEREKRPKLENLPDTEDQETVDINSVSEGKE 452
Query: 349 DNISKLFPAPSE---KSHEETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKT 405
+NI E KS EE D K++ M + + KD + G+
Sbjct: 453 NNIMITLETNIEHNLKSEEEKDQEKQQ---MFENKLIKSEEIKDTILQTVDLVSQETGEK 509
Query: 406 EAYLEAIRKNIEWLKKHDKKGNKEDYDLSKMRDFINKQAD 445
EA ++A+ + K+ ++ ED K D I+ +D
Sbjct: 510 EANIQAVDSEVGLTKEDTQEKLGEDDKTQK--DVISNTSD 547
>gi|226497734 RNA binding motif protein 19 [Homo sapiens]
Length = 960
Score = 39.3 bits (90), Expect = 0.008
Identities = 50/220 (22%), Positives = 85/220 (38%), Gaps = 29/220 (13%)
Query: 211 DPNKPTSWTENQAGKIPEKVTPMAAIQDGLAKGENDETVSNTLTLTNGLERRTKTYSEDN 270
DP KP +W+++ K P + + K E + V+ L K +
Sbjct: 82 DPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKVAGQL---------EKLKEDTE 132
Query: 271 FEELQYFPNFYALLKSIDSEKEAKEKETLITIMKTLIDFVKMMVKYGTISPEEGVSYLEN 330
F+E + ++ + + E K D++ G S EEG E+
Sbjct: 133 FQE--FLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQESEEEGAG--ED 188
Query: 331 LDEMIALQTKNKLEKNATDN---ISKLFPAPSEKSHEETDSTKE-----EAAKMEKEYGS 382
L+E +L+ K ++K +D SK+ A S S EE +S E E ++ E+E S
Sbjct: 189 LEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEDSS 248
Query: 383 LKDSTKDDNSN--------PGGKTDEPKGKTEAYLEAIRK 414
++ +S P GK P+ + E A +K
Sbjct: 249 ATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQK 288
>gi|226497654 RNA binding motif protein 19 [Homo sapiens]
Length = 960
Score = 39.3 bits (90), Expect = 0.008
Identities = 50/220 (22%), Positives = 85/220 (38%), Gaps = 29/220 (13%)
Query: 211 DPNKPTSWTENQAGKIPEKVTPMAAIQDGLAKGENDETVSNTLTLTNGLERRTKTYSEDN 270
DP KP +W+++ K P + + K E + V+ L K +
Sbjct: 82 DPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKVAGQL---------EKLKEDTE 132
Query: 271 FEELQYFPNFYALLKSIDSEKEAKEKETLITIMKTLIDFVKMMVKYGTISPEEGVSYLEN 330
F+E + ++ + + E K D++ G S EEG E+
Sbjct: 133 FQE--FLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQESEEEGAG--ED 188
Query: 331 LDEMIALQTKNKLEKNATDN---ISKLFPAPSEKSHEETDSTKE-----EAAKMEKEYGS 382
L+E +L+ K ++K +D SK+ A S S EE +S E E ++ E+E S
Sbjct: 189 LEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEDSS 248
Query: 383 LKDSTKDDNSN--------PGGKTDEPKGKTEAYLEAIRK 414
++ +S P GK P+ + E A +K
Sbjct: 249 ATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQK 288
>gi|226497574 RNA binding motif protein 19 [Homo sapiens]
Length = 960
Score = 39.3 bits (90), Expect = 0.008
Identities = 50/220 (22%), Positives = 85/220 (38%), Gaps = 29/220 (13%)
Query: 211 DPNKPTSWTENQAGKIPEKVTPMAAIQDGLAKGENDETVSNTLTLTNGLERRTKTYSEDN 270
DP KP +W+++ K P + + K E + V+ L K +
Sbjct: 82 DPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKVAGQL---------EKLKEDTE 132
Query: 271 FEELQYFPNFYALLKSIDSEKEAKEKETLITIMKTLIDFVKMMVKYGTISPEEGVSYLEN 330
F+E + ++ + + E K D++ G S EEG E+
Sbjct: 133 FQE--FLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQESEEEGAG--ED 188
Query: 331 LDEMIALQTKNKLEKNATDN---ISKLFPAPSEKSHEETDSTKE-----EAAKMEKEYGS 382
L+E +L+ K ++K +D SK+ A S S EE +S E E ++ E+E S
Sbjct: 189 LEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEDSS 248
Query: 383 LKDSTKDDNSN--------PGGKTDEPKGKTEAYLEAIRK 414
++ +S P GK P+ + E A +K
Sbjct: 249 ATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQK 288
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 38.9 bits (89), Expect = 0.010
Identities = 82/391 (20%), Positives = 167/391 (42%), Gaps = 44/391 (11%)
Query: 47 AEAEEDKIKKTYPPENKPGQSNYSFVDNLNLLKAITEKEKIEKE--RQSIRSSPLDNKLN 104
+E ++ ++K + +PG +++ L + E ++++K+ R + S L+ +
Sbjct: 1984 SEIRKEYLEKIQGAQKEPGNKSHAKELQELLKEKQQEVKQLQKDCIRYQEKISALERTVK 2043
Query: 105 VEDVDSTKNRKLIDDYDSTKSGLDHKFQDDPDGLHQLDGTPLTAEDIVHKIAARIYEEND 164
+ T+++K D + TK L + +L + +D + AAR+ +N
Sbjct: 2044 ALEFVQTESQK---DLEITKENLAQAVEHRKKAQAELASFKVLLDDTQSE-AARVLADNL 2099
Query: 165 RAVFDKIVSKLLNLGLITESQAHTLEDEVAEVLQKLISKEANNYEEDPNKPTSWTENQAG 224
+ + +K ES ++ + ++ ++L E + +E N +
Sbjct: 2100 KLKKELQSNK--------ESVKSQMKQKDEDLERRLEQAEEKHLKEKKNMQEKLDALRRE 2151
Query: 225 KIPEKVTPMAAIQDGLAKGEND-----ETVSNTLTLTNGLERRTKTYSEDNF----EELQ 275
K+ + T + IQ L K + + E + +T+T + + +D E +
Sbjct: 2152 KVHLEET-IGEIQVTLNKKDKEVQQLQENLDSTVTQLAAFTKSMSSLQDDRDRVIDEAKK 2210
Query: 276 YFPNFYALLKSIDSEKEAKEKETLITIMKTLIDFVKMMVKYGTISPEE---GVSYLENLD 332
+ F ++S E+E + KE +++K D ++ M +I EE +S LE+ D
Sbjct: 2211 WERKFSDAIQS--KEEEIRLKEDNCSVLK---DQLRQM----SIHMEELKINISRLEH-D 2260
Query: 333 EMI---ALQTKNKLEKNATDNI---SKLFPAPSEKSHEETDSTKEEAAKMEKEYGSLKDS 386
+ I QT+ +L++ D + +K + E++ S++ E AK+E E SLKD
Sbjct: 2261 KQIWESKAQTEVQLQQKVCDTLQGENKELLSQLEETRHLYHSSQNELAKLESELKSLKDQ 2320
Query: 387 TKDDNSNPGGKTDEPKGKTEAYLEAIRKNIE 417
D SN K E KG E + +I+
Sbjct: 2321 L-TDLSNSLEKCKEQKGNLEGIIRQQEADIQ 2350
Score = 35.8 bits (81), Expect = 0.086
Identities = 94/459 (20%), Positives = 179/459 (38%), Gaps = 69/459 (15%)
Query: 27 QDKSLHNRELSAERPLNEQIAEAEEDKIKKTYPPENKPGQSNYSFVDNLNLL-----KAI 81
++KSL ELS R E++ ++ D ++ +NK + + L LL K I
Sbjct: 1498 ENKSLQE-ELSLARGTIERLTKSLAD-VESQVSAQNKEKDT---VLGRLALLQEERDKLI 1552
Query: 82 TEKEKIEKERQSIRSSPLDNKLNVEDVDSTKNR--KLIDDYDSTKSGLDHKFQDDPDGLH 139
TE ++ E QS+ SS KL +E + K + K I+ S+K ++Q+ L
Sbjct: 1553 TEMDRSLLENQSLSSSCESLKLALEGLTEDKEKLVKEIESLKSSKIAESTEWQEKHKELQ 1612
Query: 140 Q--------LDGTPLTAEDIVHKIAARIYEENDRAVFDKIVSKLLNLGLITESQAHTLED 191
+ + AE I H + A E+ + ++ K+ S N TE Q E
Sbjct: 1613 KEYEILLQSYENVSNEAERIQHVVEAVRQEKQE--LYGKLRSTEAN-KKETEKQLQEAEQ 1669
Query: 192 EVAEVLQKLISKEANNYEEDPNKPTSWTENQAGKIPEKVTPMAAIQDGLAKGENDETVSN 251
E+ E+ +K+ + + + E + ++ +V P AK + +S+
Sbjct: 1670 EMEEMKEKM-----RKFAKSKQQKILELEEENDRLRAEVHPAG----DTAKECMETLLSS 1720
Query: 252 TLTLTNGLERRTKTYSEDNFEELQYFPNFYALLKSIDSEKEAKEKETLITIMKTLIDFVK 311
++ LER Y +S+ SEK++ +E + +K I+
Sbjct: 1721 NASMKEELERVKMEYE-----------TLSKKFQSLMSEKDSLSEE--VQDLKHQIE--- 1764
Query: 312 MMVKYGTISPEEGVSYLENLDEMIALQTKNKLEKNATDNISKLFPAPSEK------SHEE 365
G +S + + E D + N T+ ++ P +E+ S
Sbjct: 1765 -----GNVSKQANLEATEKHDN----------QTNVTEEGTQSIPGETEEQDSLSMSTRP 1809
Query: 366 TDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIRKNIEWLKKHDKK 425
T S +AK S S+ D+ +N + D+ K + E +KN E+ + + +
Sbjct: 1810 TCSESVPSAKSANPAVSKDFSSHDEINNYLQQIDQLKERIAGLEEEKQKNKEFSQTLENE 1869
Query: 426 GNKEDYDLSKMRDFINKQADAYVEKGILDKEEAEAIKRI 464
N +S + + + +L+++ E + R+
Sbjct: 1870 KNTLLSQISTKDGELKMLQEEVTKMNLLNQQIQEELSRV 1908
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 38.1 bits (87), Expect = 0.017
Identities = 105/457 (22%), Positives = 168/457 (36%), Gaps = 75/457 (16%)
Query: 20 FPKP--GGSQDKSLHNRELSAERPLNEQIAEAEEDKIKKT-------------------Y 58
FPKP G+ DKS RPL QI DK K +
Sbjct: 37 FPKPLQRGTNDKS---------RPLKSQITVTRHDKRKLEEGQKPAHKWIRHSFRKILQW 87
Query: 59 PPENKPGQSNYSFVDNLNLLKAITEKEKIEKERQSIRSSPLDNKLNVEDVDSTKNRKLID 118
PP + F +L K +K + +K + +PL DS K
Sbjct: 88 PPIYTAAREQTPF-RHLYTSKTHLKKAEYKKSKDEKGGTPLKK-------DSKKKGGSYA 139
Query: 119 DYDSTKSGLDHKFQDDPDGLHQLDGTPLTA--EDIVHKIAARIYEENDRAVFDKIVSKLL 176
+K ++ K + ++ D TPL + E+ K + E N + K VSK
Sbjct: 140 TNPESKQIVEEKTKRQ----NEADKTPLKSSHENEQSKKSKSSSETNPESQNSKTVSKNC 195
Query: 177 NLGLITESQAHTLEDEVAEVLQKLISKEANNYEEDPNKPTSWTENQAGKIPEKVTPMAAI 236
+ +D+ K + E + + +P K ++ I E + +
Sbjct: 196 SQ-----------KDKKDSKNSKKTNTEFLHTKNNPKKDLKRSKTSNDPISEICSENSLN 244
Query: 237 QDGL--AKGENDETVSNTLTLTNGLERRTKTYSEDNFEELQYFPNFYALLKSIDSEKEAK 294
D L +DE+++ L N + +K YS + + A KS D+E E
Sbjct: 245 VDFLMLVGQSDDESINFDAWLRNYSQNNSKNYSLKYTKYTKKDTKKNAK-KSSDAESEDS 303
Query: 295 E---KETLITIMKTLIDFVKMMVKYGTISP--EEGVSYLENLDEMIALQTKNKLEKNATD 349
+ K++ D K VK T S E G S E D + K KL+K+
Sbjct: 304 KDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDERKDTK---KDKKKLKKDDKK 360
Query: 350 NISKLFPAPSEKSHEETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYL 409
+K +P E TD+ +A + +LK ++K+D+ K +E+ L
Sbjct: 361 KDTKKYP-------ESTDTESGDAKDARNDSRNLKKASKNDDKKKDAKKITFSTDSESEL 413
Query: 410 EAIRKNIEWLKKHDKKGNKEDYDLSKMRDFINKQADA 446
E+ K + +K DKK +K D S D + AD+
Sbjct: 414 ES--KESQKDEKKDKKDSKTDNKKSVKNDEESTDADS 448
Score = 32.0 bits (71), Expect = 1.2
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 8/125 (6%)
Query: 339 TKNKLEKNATDNISKLFPAPSEKSHEETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKT 398
+KN +K I+ F SE E +S K+E + K S K+D + +
Sbjct: 391 SKNDDKKKDAKKIT--FSTDSESELESKESQKDEKKDKKDSKTDNKKSVKNDEESTDADS 448
Query: 399 DEPKGKTEAYLEAIRKNIEWLKKHDKKGNKEDYDLSKMRDFINKQADAYVEKGILDKEEA 458
EPKG ++ + +K + KK DKK D K + ++D ++K +E
Sbjct: 449 -EPKGDSKKGKKDEKKGKKDSKKDDKK-----KDAKKNAESTEMESDLELKKDKKHSKEK 502
Query: 459 EAIKR 463
+ K+
Sbjct: 503 KGSKK 507
>gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 3 [Homo sapiens]
Length = 568
Score = 37.7 bits (86), Expect = 0.023
Identities = 53/250 (21%), Positives = 102/250 (40%), Gaps = 40/250 (16%)
Query: 184 SQAHTLEDEVAEVLQKLISKEANNYEEDPNKPTSWTENQAGKIP--------EKVTPMAA 235
S+ H L E E K S+E + ++P++ + + ++ K P EK+ P A
Sbjct: 194 SKPHKLMKEHKEKPSK-DSREHKSAFKEPSRDHNKSSKESSKKPKENKPLKEEKIVPKMA 252
Query: 236 IQDGLAKGENDETVSNTLTLTNGLERRTKTY------SEDNFEELQYFPNFYALLKSIDS 289
++ + + SN LT+T+G +++ + SE+ + + + AL KS S
Sbjct: 253 FKEPKPMSKEPKPDSNLLTITSGQDKKAPSKRPPISDSEELSAKKRKKSSSEALFKSFSS 312
Query: 290 -----------EKEAKEKETLITIMKTLIDFVKM-MVKYGTISPEEGVSYLENLDEMIAL 337
+K+ K+K VKM VK + + E+ S L D+++
Sbjct: 313 APPLILTCSADKKQIKDK-----------SHVKMGKVKIESETSEKKKSTLPPFDDIVD- 360
Query: 338 QTKNKLEKNATDNISKLFPAPSEKSHEETDSTKEEAAKMEKEYGS-LKDSTKDDNSNPGG 396
+ +E+N + P+P+ S + S + + S +KD DDN
Sbjct: 361 PNDSDVEENISSKSDSEQPSPASSSSSSSSSFTPSQTRQQGPLRSIMKDLHSDDNEEESD 420
Query: 397 KTDEPKGKTE 406
+ ++ +E
Sbjct: 421 EVEDNDNDSE 430
>gi|26080431 ATPase family, AAA domain containing 5 [Homo sapiens]
Length = 1844
Score = 37.4 bits (85), Expect = 0.029
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Query: 338 QTKNKLEKNATDNISKLFPAPSEKSHEETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGK 397
+TK KL + + P K+ E+T+ EE +K G DS+KD +
Sbjct: 995 ETKRKLVEAENSKSKRKKPNEYSKNLEKTNRKSEELSKRNNSSGIKLDSSKDSGTEDMLW 1054
Query: 398 TDEPKGKTEAYL----EAIRKNIEWLKKHDKKGNKED-YDLSKMRDFINKQADAYVE-KG 451
T++ + +T + L AI+K WLK ++ E+ +L RD ++ ++ KG
Sbjct: 1055 TEKYQPQTASELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDEKHEDFSGGIDFKG 1114
Query: 452 ILDKEE 457
D EE
Sbjct: 1115 SSDDEE 1120
>gi|197313718 IQ motif containing G [Homo sapiens]
Length = 443
Score = 37.4 bits (85), Expect = 0.029
Identities = 54/250 (21%), Positives = 109/250 (43%), Gaps = 46/250 (18%)
Query: 209 EEDPNKPTSWTENQAGKIPEKVTPMAAIQDGLAKGENDETVSNTLTLTNGLERRTKTYSE 268
EE PN P G+ + M QD + K +T+ T TL ++ + +S+
Sbjct: 125 EEGPNLPEI---RHRGRFAVEFNKM---QDLVFKKPTRQTIMTTETLKK-IQIDRQFFSD 177
Query: 269 ---DNFEELQYFPNFYALLKSIDSE------------KEAKEKETLITIMKTLIDFVKMM 313
D +ELQ + +LL+++ E +E K ++ +I++ K LI+ VK
Sbjct: 178 VIADTIKELQDSATYNSLLQALSKERENKMHFYDIIAREEKGRKQIISLQKQLIN-VKKE 236
Query: 314 VKYGTISPEEGVSYLENL-DEMIALQTKNKLEKNATDNISKLFPAPSEKSHEETDSTKEE 372
++ S E Y+ NL D++ ++ K+ LE ++L A ++K T+
Sbjct: 237 WQFEVQSQNE---YIANLKDQLQEMKAKSNLENRYMKTNTELQIAQTQKKCNRTEEL--- 290
Query: 373 AAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIRKNIE-----WLKKHDKKGN 427
+ +E L+ T+++ + E +L ++ +E W++K+DK
Sbjct: 291 ---LVEEIEKLRMKTEEE--------ARTHTEIEMFLRKEQQKLEERLEFWMEKYDKDTE 339
Query: 428 KEDYDLSKMR 437
+ +L+ ++
Sbjct: 340 MKQNELNALK 349
>gi|14165288 IQ motif containing G [Homo sapiens]
Length = 443
Score = 37.4 bits (85), Expect = 0.029
Identities = 54/250 (21%), Positives = 109/250 (43%), Gaps = 46/250 (18%)
Query: 209 EEDPNKPTSWTENQAGKIPEKVTPMAAIQDGLAKGENDETVSNTLTLTNGLERRTKTYSE 268
EE PN P G+ + M QD + K +T+ T TL ++ + +S+
Sbjct: 125 EEGPNLPEI---RHRGRFAVEFNKM---QDLVFKKPTRQTIMTTETLKK-IQIDRQFFSD 177
Query: 269 ---DNFEELQYFPNFYALLKSIDSE------------KEAKEKETLITIMKTLIDFVKMM 313
D +ELQ + +LL+++ E +E K ++ +I++ K LI+ VK
Sbjct: 178 VIADTIKELQDSATYNSLLQALSKERENKMHFYDIIAREEKGRKQIISLQKQLIN-VKKE 236
Query: 314 VKYGTISPEEGVSYLENL-DEMIALQTKNKLEKNATDNISKLFPAPSEKSHEETDSTKEE 372
++ S E Y+ NL D++ ++ K+ LE ++L A ++K T+
Sbjct: 237 WQFEVQSQNE---YIANLKDQLQEMKAKSNLENRYMKTNTELQIAQTQKKCNRTEEL--- 290
Query: 373 AAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIRKNIE-----WLKKHDKKGN 427
+ +E L+ T+++ + E +L ++ +E W++K+DK
Sbjct: 291 ---LVEEIEKLRMKTEEE--------ARTHTEIEMFLRKEQQKLEERLEFWMEKYDKDTE 339
Query: 428 KEDYDLSKMR 437
+ +L+ ++
Sbjct: 340 MKQNELNALK 349
>gi|45439327 periplakin [Homo sapiens]
Length = 1756
Score = 37.4 bits (85), Expect = 0.029
Identities = 72/359 (20%), Positives = 143/359 (39%), Gaps = 42/359 (11%)
Query: 77 LLKAITEKEKIEKERQSIRSSPLDNKLNVE--DVDSTKNRKLIDDYDSTKSGLDHKFQDD 134
++K T+ E +EKE Q +R +D +E D++ + +K I TK + K +
Sbjct: 1235 VIKYKTDPE-MEKELQRLREEIVDKTRLIERCDLEIYQLKKEIQALKDTKPQVQTK--EV 1291
Query: 135 PDGLHQLDGTPLTAEDIVHKIAARIYEENDRAVFDKIVSKLLNLGLITESQAHTLEDEVA 194
+ Q P T E++ + A++ EE + V L E Q E+E++
Sbjct: 1292 VQEILQFQEDPQTKEEVA-SLRAKLSEEQKKQV------DLERERASQEEQIARKEEELS 1344
Query: 195 EVLQKLISKEANNYEEDPNKPTSWTENQAGKIPEKVTPMAAIQDGLAKGENDETVSNTLT 254
V ++++ +E YEE+P A I ++ + ++ L + + T
Sbjct: 1345 RVKERVVQQEVVRYEEEPGLRAE-ASAFAESIDVELRQIDKLRAELRRLQRRRTELERQL 1403
Query: 255 LTNGLERRTKTYSEDNFEELQYFPNFYALLKSIDSEKEAKEKETLITIMKTLIDFVKMMV 314
ER+ + +E + LQ L E EA+EK T K+++
Sbjct: 1404 EELERERQARREAEREVQRLQ-----QRLAALEQEEAEAREKVT---------HTQKVVL 1449
Query: 315 KYGTISPEEGVSYLENLDEMIALQTKNKLEKNATDNISKLFPAPSEKSHEE----TDSTK 370
+ E L+E Q + +L + + + + A + +E ++S +
Sbjct: 1450 QQDPQQAREHALLRLQLEEE---QHRRQLLEGELETLRRKLAALEKAEVKEKVVLSESVQ 1506
Query: 371 EEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIRKNIEWLKKHDKKGNKE 429
E E+E LK S ++++ + K + + + + + L+ H+ K +KE
Sbjct: 1507 VEKGDTEQEIQRLKSSLEEESRS--------KRELDVEVSRLEARLSELEFHNSKSSKE 1557
>gi|118498362 kinectin 1 isoform b [Homo sapiens]
Length = 1306
Score = 36.6 bits (83), Expect = 0.050
Identities = 85/403 (21%), Positives = 171/403 (42%), Gaps = 40/403 (9%)
Query: 43 NEQIAEAEE-DKIKKT-YPPENK----PGQSNYSFVDNLNLLKAITEKEK-IEKERQSIR 95
NEQ A A E +K++++ Y ++K Q + + + K + ++ K ++ E Q ++
Sbjct: 659 NEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQHEISNKMEEFKILNDQNKALKSEVQKLQ 718
Query: 96 S--SPLDNKLNVEDVDST---KNRKLIDDYDSTKSGLDHKFQDDPD-GLHQLDGTPLTAE 149
+ S NK VE ++ K+ KL + ++GL + + + + + LT E
Sbjct: 719 TLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKE 778
Query: 150 DIVHKIAARIYEENDRAVFDKIVSKLLNLGLITESQAHTLEDEVAEVLQKLISKEANNYE 209
V + A+ +ND+ F +V +L + + + ++E+ + L K+ +KE
Sbjct: 779 --VQDLKAK---QNDQVSFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQL 833
Query: 210 EDPNKPTSWTENQAGKIPEKVTPMAAIQDGLAKGENDETVSNTLTLTNGLERRTKTYSED 269
+K GK E++ M A+ + E ++ ++NT L+ ++
Sbjct: 834 SITSKVQELQNLLKGK-EEQMNTMKAVLE-----EKEKDLANTGKWLQDLQEENESLKAH 887
Query: 270 NFEELQYFPNFYALLKSIDSEKEAKEKETLITIMKTLIDFVKMMVKYGTISPEEGVSYLE 329
E Q+ LK S + +E E ++ + + ++ M+K E S L
Sbjct: 888 VQEVAQHN------LKEASSASQFEELEIVLKEKENELKRLEAMLK-------ERESDLS 934
Query: 330 NLDEMIA-LQTKNKLEKNATDNISK--LFPAPSEKSHEETDSTKEEAAKMEKEYGSLKDS 386
+ +++ +Q +NKL K+ + + + A S HEE E K + DS
Sbjct: 935 SKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSFPPHEELLKVISEREKEISGLWNELDS 994
Query: 387 TKDDNSNPGGKTDEPKGKTEAYLEAIRKNIEWLKKHDKKGNKE 429
KD + K ++ + K +EA+ + L+ K +KE
Sbjct: 995 LKDAVEHQRKKNNDLREKNWEAMEALASTEKMLQDKVNKTSKE 1037
>gi|32484979 adaptor-related protein complex 3, beta 1 subunit [Homo
sapiens]
Length = 1094
Score = 35.4 bits (80), Expect = 0.11
Identities = 26/123 (21%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 345 KNATDNISKLFPAPSEKSHEETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTD----- 399
K +N +K F + SE+ + +DS+ + ++ E G +S ++ +SN D
Sbjct: 665 KAKQENSAKKFYSESEEEEDSSDSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSSEQ 724
Query: 400 EPKGKTEAYLE---AIRKNIEWLKKHDKKGNKEDYDLSKMRDFINKQADAYVEKGILDKE 456
+ + E+ LE ++N + K D + +++ + SK D N ++ + + +
Sbjct: 725 DSESGRESGLENKRTAKRNSKAKGKSDSEDGEKENEKSKTSDSSNDESSSIEDSSSDSES 784
Query: 457 EAE 459
E+E
Sbjct: 785 ESE 787
>gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo
sapiens]
Length = 1150
Score = 35.4 bits (80), Expect = 0.11
Identities = 25/71 (35%), Positives = 28/71 (39%), Gaps = 13/71 (18%)
Query: 368 STKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIRKNIEWLKKHDKKGN 427
S E+ K EK+ S KD KD +TDEPK K K D K
Sbjct: 792 SLPEKEDKKEKDKKSKKDERKDKKEERDDETDEPKPKRR-------------KSGDDKDK 838
Query: 428 KEDYDLSKMRD 438
KED D K D
Sbjct: 839 KEDRDERKKED 849
>gi|41872583 Rho-associated, coiled-coil containing protein kinase 2
[Homo sapiens]
Length = 1388
Score = 35.4 bits (80), Expect = 0.11
Identities = 41/211 (19%), Positives = 80/211 (37%), Gaps = 9/211 (4%)
Query: 236 IQDGLAKGENDETVSNTLTLTNGLERRTKTYSEDNFEELQYFPNFYALLKSIDS--EKEA 293
+ D + E D S + ++++ T E E+Q KS+++ EK A
Sbjct: 422 LSDSPSCRETDSIQSRKNEESQEIQKKLYTLEEHLSNEMQAKEELEQKCKSVNTRLEKTA 481
Query: 294 KEKETLITIMKTLIDFVKMMVKYGTISPEEGVSYLENLDEMIALQTKNKLEKNATDNISK 353
KE E IT+ K++ ++ + + + + Y D K LE + +
Sbjct: 482 KELEEEITLRKSVESALRQLEREKALLQHKNAEYQRKADH--EADKKRNLENDVNSLKDQ 539
Query: 354 LFPAPSEKSHEETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIR 413
L + + + K + + + + T+ D + KT K LE+
Sbjct: 540 LEDLKKRNQNSQISTEKVNQLQRQLDETNALLRTESDTAARLRKTQAESSKQIQQLESNN 599
Query: 414 KNIEWLKKHDKKGNKEDYDLSKMRDFINKQA 444
++++ DK E L ++FIN Q+
Sbjct: 600 RDLQ-----DKNCLLETAKLKLEKEFINLQS 625
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 35.4 bits (80), Expect = 0.11
Identities = 91/444 (20%), Positives = 174/444 (39%), Gaps = 62/444 (13%)
Query: 33 NRELSAERPLNEQIAE----AEEDKIKKTYPPENKPGQSNYSFVDNLNLLKAITEKEKIE 88
N+ L L EQ+ E AEEDK +K +K ++ F LK+ EK
Sbjct: 1144 NKSLKENTFLQEQLVELKMLAEEDK-RKVSELTSKLKTTDEEFQS----LKSSHEKSNKS 1198
Query: 89 KERQSIRSSPLDNKLNVE-DVDSTKNRKLID-------DYDSTK-----SGLDHKFQDDP 135
E +S+ L +L ++ D+ K L++ + S+K S + H
Sbjct: 1199 LEDKSLEFKKLSEELAIQLDICCKKTEALLEAKTNELINISSSKTNAILSRISHCQHRTT 1258
Query: 136 DGLHQLDGTPLTAEDIVHKIAARIYEENDRAV-FDKIVSKLLNLGLITESQAHTLEDEVA 194
L T ++ ++ E+N + F + +L +S +E V
Sbjct: 1259 KVKEALLIKTCTVSELEAQLRQLTEEQNTLNISFQQATHQLEEKENQIKSMKADIESLVT 1318
Query: 195 EVLQKLISKEANNYEEDPNKPTSWTENQAGKIPEKVTPMAAIQDGLAKGEND-ETVSNTL 253
E ++ + KE N ++ ++ S ++ E + + +++ L + + + ++S L
Sbjct: 1319 E--KEALQKEGGNQQQAASEKESCITQLKKELSENINAVTLMKEELKEKKVEISSLSKQL 1376
Query: 254 TLTNGLERRTKTYSEDNFEELQYFPNFYALLKSIDSEKEAKEKETLITIMKTLIDFVK-M 312
T N + + + SE +L K D EK L+D V+ +
Sbjct: 1377 TDLNVQLQNSISLSEKEAA-------ISSLRKQYDEEK------------CELLDQVQDL 1417
Query: 313 MVKYGTISPEEGVSYLENLDEMI--------ALQTKNKLEKNATDNISKLFPAPSEKSHE 364
K T+S E+ +S LE +D+ Q++ +N + S++++E
Sbjct: 1418 SFKVDTLSKEK-ISALEQVDDWSNKFSEWKKKAQSRFTQHQNTVKELQIQLELKSKEAYE 1476
Query: 365 ETDST---KEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIRKNIEWLKK 421
+ + KEE + K + LK +DD S K ++ + E L++ I L+
Sbjct: 1477 KDEQINLLKEELDQQNKRFDCLKGEMEDDKS----KMEKKESNLETELKSQTARIMELED 1532
Query: 422 HDKKGNKEDYDLSKMRDFINKQAD 445
H + E L+++ N+Q D
Sbjct: 1533 HITQKTIEIESLNEVLKNYNQQKD 1556
Score = 34.3 bits (77), Expect = 0.25
Identities = 77/407 (18%), Positives = 152/407 (37%), Gaps = 56/407 (13%)
Query: 77 LLKAITEKEKIEKERQSIRSSPLDNKLNVEDVDSTKNRKLIDDYDSTKSG----LDHKFQ 132
L KA++ +K E+ R+ +++ + +E + L + K + +
Sbjct: 416 LEKALSTAQKTEEARRKLKAEMDEQIKTIEKTSEEERISLQQELSRVKQEVVDVMKKSSE 475
Query: 133 DDPDGLHQLDGTPLTA--EDIVHKIAARI--YEENDRAVFDKIVSKLLNLGLITESQAHT 188
+ L +L L +++ K+ R ++E + +K S+ L + E Q +
Sbjct: 476 EQIAKLQKLHEKELARKEQELTKKLQTREREFQEQMKVALEKSQSEYLKISQEKEQQ-ES 534
Query: 189 LEDEVAEVLQKLISKEANNYEEDPNKPTSWTENQAGKIPEKVTPMA----------AIQD 238
L E E+ +K I E+ N D + + ++ + A+
Sbjct: 535 LALEELELQKKAILTESENKLRDLQQEAETYRTRILELESSLEKSLQENKNQSKDLAVHL 594
Query: 239 GLAKGENDETVSNTLTLTNGLERRTKTYSEDNF--EELQYFPNFYALLKSIDSEKEAKEK 296
K ++++ ++ + + E + + +D E+LQ Y EK +EK
Sbjct: 595 EAEKNKHNKEIT-VMVEKHKTELESLKHQQDALWTEKLQVLKQQYQTEMEKLREKCEQEK 653
Query: 297 ETLITIMKTLIDFVKMMVKYGTISPEEGVSYLENLDEMIALQTKNKLEKNATDNISKLFP 356
ETL+ + + +++E ++E +T KL+ T+
Sbjct: 654 ETLLKDKEIIFQ-----------------AHIEEMNE----KTLEKLDVKQTE------- 685
Query: 357 APSEKSHEETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIRKNI 416
E E + K+E+E LKD T K DE K + +++I K
Sbjct: 686 --LESLSSELSEVLKARHKLEEELSVLKDQTDKMKQELEAKMDEQKNHHQQQVDSIIKEH 743
Query: 417 EWLKKHDKKGNKEDYD----LSKMRDFINKQADAYVEKGILDKEEAE 459
E + +K K+ + L K RD K+ A+VE D + +E
Sbjct: 744 EVSIQRTEKALKDQINQLELLLKERDKHLKEHQAHVENLEADIKRSE 790
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 35.0 bits (79), Expect = 0.15
Identities = 98/488 (20%), Positives = 193/488 (39%), Gaps = 53/488 (10%)
Query: 24 GGSQDKSLHNRELSAE-RPLNEQIAEAEEDKIKKTYPPENKPGQSNYSFVDNLNLLKAIT 82
G S D S EL A+ L Q+A+ EE+ E + Q N + L I+
Sbjct: 1055 GDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAAQKNMALKKIRELESQIS 1114
Query: 83 E-KEKIEKERQSIRSSPLDNKLNVEDVDSTKNRKLIDDYDSTKSGLDHKFQDDPDGLHQL 141
E +E +E ER S + + E++++ K +L D DST + + + + + + ++ L
Sbjct: 1115 ELQEDLESERASRNKAEKQKRDLGEELEALKT-ELEDTLDSTAAQQELRSKREQE-VNIL 1172
Query: 142 DGTPLTAEDIVHKIAARIYEENDRAVFDKIVSKLLNLGLI---TESQAHTLEDEVAEVLQ 198
T L E H+ + + +++ +L + E TLE+E E+
Sbjct: 1173 KKT-LEEEAKTHEAQIQEMRQKHSQAVEELAEQLEQTKRVKANLEKAKQTLENERGELAN 1231
Query: 199 --KLISKEANNYEEDPNKPTSWT----------ENQAGKIPEKVTPMAAIQDGL------ 240
K++ + + E K + E ++ +KVT + D +
Sbjct: 1232 EVKVLLQGKGDSEHKRKKVEAQLQELQVKFNEGERVRTELADKVTKLQVELDNVTGLLSQ 1291
Query: 241 AKGENDETVSNTLTLTNGLERRTKTYSEDNFEEL-------QYFPNFYALLKSIDSEKEA 293
+ ++ + + L + L+ + E+N ++L Q + + ++ E+EA
Sbjct: 1292 SDSKSSKLTKDFSALESQLQDTQELLQEENRQKLSLSTKLKQVEDEKNSFREQLEEEEEA 1351
Query: 294 KE--KETLITIMKTLIDFVKMMV-KYGTISPEEGVSY-----LENL----DEMIAL---- 337
K ++ + T+ + D K M G + E V LE L +E +A
Sbjct: 1352 KHNLEKQIATLHAQVADMKKKMEDSVGCLETAEEVKRKLQKDLEGLSQRHEEKVAAYDKL 1411
Query: 338 -QTKNKLEKNATDNISKLFPAPSEKSHEETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGG 396
+TK +L++ D + L + E K + E++ S K + + D +
Sbjct: 1412 EKTKTRLQQELDDLLVDLDHQRQSACNLEKKQKKFDQLLAEEKTISAKYAEERDRAEAEA 1471
Query: 397 KTDEPKGKT--EAYLEAIRKNIEWLKKHDKKGNKEDYDLSKMRDFINKQADAYVEKGILD 454
+ E K + A EA+ + E L++ +K+ E DL +D + K +
Sbjct: 1472 REKETKALSLARALEEAMEQKAE-LERLNKQFRTEMEDLMSSKDDVGKSVHELEKSKRAL 1530
Query: 455 KEEAEAIK 462
+++ E +K
Sbjct: 1531 EQQVEEMK 1538
Score = 32.7 bits (73), Expect = 0.72
Identities = 59/300 (19%), Positives = 114/300 (38%), Gaps = 30/300 (10%)
Query: 149 EDIVHKIAARIYEENDRAVFDKIVSKLLNLGLITESQAHTLEDEVAE---VLQKLIS--- 202
E+I H + AR+ EE +R + K + I E + E+E A L+K+ +
Sbjct: 914 EEICHDLEARVEEEEERCQHLQAEKKKMQQN-IQELEEQLEEEESARQKLQLEKVTTEAK 972
Query: 203 ----KEANNYEEDPN----KPTSWTENQAGKIPEKVTPMAAIQDGLAKGEN--------- 245
+E ED N K E++ + +T LAK +N
Sbjct: 973 LKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSKSLAKLKNKHEAMITDL 1032
Query: 246 DETVSNTLTLTNGLERRTKTYSEDNFEELQYFPNFYALLKSIDSEKEAKEKETLITIMKT 305
+E + LE+ + D+ + A + + + KE+E + +
Sbjct: 1033 EERLRREEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARV 1092
Query: 306 LIDFVKMMVKYGTISPEEGVSYLENLDEMIALQ--TKNKLEKNATDNISKL--FPAPSEK 361
+ + + I E S + L E + + ++NK EK D +L E
Sbjct: 1093 EEEAAQKNMALKKIRELE--SQISELQEDLESERASRNKAEKQKRDLGEELEALKTELED 1150
Query: 362 SHEETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIRKNIEWLKK 421
+ + T + +E +K E+E LK + +++ + E + K +E + + +E K+
Sbjct: 1151 TLDSTAAQQELRSKREQEVNILKKTLEEEAKTHEAQIQEMRQKHSQAVEELAEQLEQTKR 1210
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 35.0 bits (79), Expect = 0.15
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 364 EETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIRKNIEWLKKHD 423
E+ D+ + K+EKE LK T DD S+ + KG E ++ + LK +
Sbjct: 1208 EQIDNLQRVKQKLEKEKSELKMET-DDLSSNAEAISKAKGNLEKMCRSLEDQVSELKTKE 1266
Query: 424 KKGNKEDYDLSKMRDFINKQADAYVEKGILDKEEA 458
++ + DL+ R + +A Y + LD+++A
Sbjct: 1267 EEQQRLINDLTAQRARLQTEAGEYSRQ--LDEKDA 1299
Score = 33.1 bits (74), Expect = 0.55
Identities = 75/408 (18%), Positives = 166/408 (40%), Gaps = 42/408 (10%)
Query: 72 VDNLNLLKAITEKEKIEKERQSIRSSPLDNKLNVEDVDSTKN--RKLIDDYDSTKSGLDH 129
+DNL +K +K+EKE+ ++ D N E + K K+ + S L
Sbjct: 1210 IDNLQRVK-----QKLEKEKSELKMETDDLSSNAEAISKAKGNLEKMCRSLEDQVSELKT 1264
Query: 130 KFQDDPDGLHQLDGTPLTAEDIVHKIAARIYEENDRAVFDKIVSKLLNLGLITESQAHTL 189
K ++ ++ L + + + ++ +E D V SK + I E + H L
Sbjct: 1265 KEEEQQRLINDLTAQRARLQTEAGEYSRQL-DEKDALVSQLSRSKQASTQQIEELK-HQL 1322
Query: 190 EDEVAEVLQKLISKEANNYEEDPNKPTSWTENQAGKIPEKVTPMAAIQDGLAKGEND--- 246
E+E + +++ ++ D + + E Q GK A +Q L+K ++
Sbjct: 1323 EEETKAKNALAHALQSSRHDCDLLR-EQYEEEQEGK--------AELQRALSKANSEVAQ 1373
Query: 247 ---ETVSNTLTLTNGLERRTKTYSEDNFEELQYFPNFYALLKSIDSEKEAKEKET---LI 300
+ ++ + T LE K ++ E ++ A S++ K+ + E ++
Sbjct: 1374 WRTKYETDAIQRTEELEEAKKKLAQRLQEAEEHVEAVNAKCASLEKTKQRLQNEVEDLML 1433
Query: 301 TIMKT---LIDFVKMMVKYGTISPEEGVSYLENLDEMIALQTKNKLEKNATDNISKLFPA 357
+ ++ K + + E Y E E+ A Q +++ + ++
Sbjct: 1434 DVERSNAACAALDKKQRNFDKVLSEWKQKYEETQAELEASQKESRSLSTELFKVKNVY-- 1491
Query: 358 PSEKSHEETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLEAIRKNIE 417
E+S ++ ++ + E +++E L + + GGK K + +E + I+
Sbjct: 1492 --EESLDQLETLRRENKNLQQEISDLTEQIAE-----GGKQIHELEKIKKQVEQEKCEIQ 1544
Query: 418 -WLKKHDKKGNKEDYDLSKMRDFINKQADAYVEKGILDK-EEAEAIKR 463
L++ + E+ + +++ +N Q + V++ I +K EE + +KR
Sbjct: 1545 AALEEAEASLEHEEGKILRIQLELN-QVKSEVDRKIAEKDEEIDQLKR 1591
>gi|56961680 coiled-coil domain containing 147 [Homo sapiens]
Length = 872
Score = 35.0 bits (79), Expect = 0.15
Identities = 37/186 (19%), Positives = 84/186 (45%), Gaps = 20/186 (10%)
Query: 285 KSIDS--EKEAKEKETLITIMKTLIDFVKMMVKYGTISPEEGVSYLENLDEMIALQTKNK 342
K +DS +KE K KET++ + + +++ K+ + G+S ++ + L+ K +
Sbjct: 104 KMVDSAYDKEQKAKETILALKEEIVNLTKL------VEQGSGLSMDQHSNIRDLLRFKEE 157
Query: 343 LEKNATDNISKLFP-----APSEKSHEETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGK 397
+ K +S++ A + + +ET+ +KEEA ++ N +
Sbjct: 158 VTKERDQLLSEVVKLRESLAQTTEQQQETERSKEEAEHAISQF----QQEIQQRQNEASR 213
Query: 398 TDEPKGKTEAYLEAIRKNIEWLKKHDKKGNKEDYDLSKMRDFINKQADAYVEKGILDKEE 457
K K E L+ I+ +++ + K + Y + K ++ + K E+ IL++
Sbjct: 214 EFRKKEKLEKELKQIQADMDSRQTEIKA--LQQY-VQKSKEELQKLEQQLKEQKILNERA 270
Query: 458 AEAIKR 463
A+ +++
Sbjct: 271 AKELEQ 276
>gi|203097003 Rho GTPase activating protein 21 [Homo sapiens]
Length = 1958
Score = 34.7 bits (78), Expect = 0.19
Identities = 52/244 (21%), Positives = 92/244 (37%), Gaps = 27/244 (11%)
Query: 181 ITESQAHTLEDEVAEVLQKLISKEANNYEEDPNKPTSWTENQ--AGKIPEKVTPMAAIQD 238
+ ES+ +DE +E++ + E ++ E P PT+ T + GK+ E +
Sbjct: 1611 VAESKGDEADDERSELISEGRPVETDSESEFPVFPTALTSERLFRGKLQE------VTKS 1664
Query: 239 GLAKGENDETVSNTLTLTNGLERRTKTYSEDNFEELQ--------YFPNFYALLKSIDSE 290
E E +LT+ L+ R + +S E F + L +E
Sbjct: 1665 SRRNSEGSELSCTEGSLTSSLDSRRQLFSSHKLIECDTLSRKKSARFKSDSGSLGDAKNE 1724
Query: 291 KEAKEKETLITIMKTLIDFVKMMVKYGTISPEEGVSYLENLDEMIALQTKNKLEKNATDN 350
KEA + +MK K ++P G S + + + KL A
Sbjct: 1725 KEAPSLTKVFDVMK------KGKSTGSLLTPTRGESEKQEPTWKTKIADRLKLRPRAP-- 1776
Query: 351 ISKLFPAPSEKSHEETDSTKEEAAKMEKEYGSLKDSTKDDNSNPGGKTDEPKGKTEAYLE 410
+F + K + ET K ++ + G +D+T+ N K E G+ E+ L
Sbjct: 1777 ADDMFGVGNHKVNAET--AKRKSIRRRHTLGGHRDATEISVLN-FWKVHEQSGERESELS 1833
Query: 411 AIRK 414
A+ +
Sbjct: 1834 AVNR 1837
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 34.3 bits (77), Expect = 0.25
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 242 KGENDETVSNTLTLTNGLERRTKTYSEDNF--EELQYFPNFYALLKSIDSEKEAKEKETL 299
K N++T L +E ++T S+ E+ + F + LK + +KE +++
Sbjct: 865 KNANEKTRLENQNLLIQVEEVSQTCSKSEIHNEKEKCFIKEHENLKPLLEQKELRDRRAE 924
Query: 300 ITIMKTLIDFVKMMVKYGTISPEEGVSYLENLDEMIALQTKNKLEKNATDNISKLFPAPS 359
+ ++K + K ++ + +S ++ L+E I K EK N KL +
Sbjct: 925 LILLKD------SLAKSPSVK-NDPLSSVKELEEKIENLEKECKEKEEKINKIKLVAVKA 977
Query: 360 EK----SHEETDSTKEEAAKMEKEYGSLKDSTKD 389
+K S +ET + KEE + E L S +D
Sbjct: 978 KKELDSSRKETQTVKEELESLRSEKDQLSASMRD 1011
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.128 0.347
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,143,309
Number of Sequences: 37866
Number of extensions: 875691
Number of successful extensions: 2858
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 165
Number of HSP's that attempted gapping in prelim test: 2677
Number of HSP's gapped (non-prelim): 340
length of query: 468
length of database: 18,247,518
effective HSP length: 106
effective length of query: 362
effective length of database: 14,233,722
effective search space: 5152607364
effective search space used: 5152607364
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.