Search of human proteins with 195539375

Search of human proteins with 195539375

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|195539375 PARK2 co-regulated-like isoform 2 [Homo sapiens]
         (123 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|195539375 PARK2 co-regulated-like isoform 2 [Homo sapiens]         247   1e-66
gi|21450808 PARK2 co-regulated-like isoform 1 [Homo sapiens]          140   2e-34
gi|28559039 mediator complex subunit 1 [Homo sapiens]                  31   0.21 
gi|112821690 G protein-regulated inducer of neurite outgrowth 3 ...    31   0.21 
gi|18450371 protein tyrosine phosphatase, receptor type, A isofo...    31   0.27 
gi|4506303 protein tyrosine phosphatase, receptor type, A isofor...    31   0.27 
gi|18450369 protein tyrosine phosphatase, receptor type, A isofo...    31   0.27 
gi|60097902 filaggrin [Homo sapiens]                                   30   0.60 
gi|117938254 BCL2-associated transcription factor 1 isoform 3 [H...    30   0.60 
gi|117938251 BCL2-associated transcription factor 1 isoform 2 [H...    30   0.60 
gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Hom...    30   0.60 
gi|10440566 leucine zipper, putative tumor suppressor 1 [Homo sa...    29   1.0  
gi|57222563 colonic and hepatic tumor over-expressed protein iso...    29   1.0  
gi|57164942 colonic and hepatic tumor over-expressed protein iso...    29   1.0  
gi|151301098 zinc finger, DBF-type containing 2 [Homo sapiens]         29   1.0  
gi|93102379 low density lipoprotein-related protein 1B precursor...    28   1.8  
gi|227497884 brain-enriched guanylate kinase-associated protein ...    28   1.8  
gi|13124765 brain-enriched guanylate kinase-associated protein [...    28   1.8  
gi|21361458 Rho guanine nucleotide exchange factor (GEF) 17 [Hom...    28   1.8  
gi|24431975 hypothetical protein LOC26148 [Homo sapiens]               28   1.8  
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]             28   1.8  
gi|38202205 zinc finger, FYVE domain containing 26 [Homo sapiens]      28   2.3  
gi|239756568 PREDICTED: similar to BCL2-associated transcription...    27   3.0  
gi|169218320 PREDICTED: similar to BCL2-associated transcription...    27   3.0  
gi|23503285 leucine rich repeat containing 34 [Homo sapiens]           27   3.0  
gi|42733592 hypothetical protein LOC399693 [Homo sapiens]              27   3.0  
gi|83367077 mucin 16 [Homo sapiens]                                    27   3.9  
gi|114842396 ankyrin-repeat and fibronectin type III domain cont...    27   3.9  
gi|82880648 MLK-related kinase isoform 1 [Homo sapiens]                27   3.9  
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        27   3.9  

>gi|195539375 PARK2 co-regulated-like isoform 2 [Homo sapiens]
          Length = 123

 Score =  247 bits (631), Expect = 1e-66
 Identities = 123/123 (100%), Positives = 123/123 (100%)

Query: 1   MQKSEGSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPRPSD 60
           MQKSEGSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPRPSD
Sbjct: 1   MQKSEGSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPRPSD 60

Query: 61  KLNPKTINPVHSDDEVFERGLNALVQLSVVVGPSLNDHLKHLLTSGSLSIIKSKIPTYCS 120
           KLNPKTINPVHSDDEVFERGLNALVQLSVVVGPSLNDHLKHLLTSGSLSIIKSKIPTYCS
Sbjct: 61  KLNPKTINPVHSDDEVFERGLNALVQLSVVVGPSLNDHLKHLLTSGSLSIIKSKIPTYCS 120

Query: 121 ICC 123
           ICC
Sbjct: 121 ICC 123


>gi|21450808 PARK2 co-regulated-like isoform 1 [Homo sapiens]
          Length = 221

 Score =  140 bits (353), Expect = 2e-34
 Identities = 70/76 (92%), Positives = 70/76 (92%)

Query: 1  MQKSEGSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPRPSD 60
          MQKSEGSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPRPSD
Sbjct: 1  MQKSEGSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPRPSD 60

Query: 61 KLNPKTINPVHSDDEV 76
          KLNPKTINP      V
Sbjct: 61 KLNPKTINPFGEQSRV 76



 Score =  114 bits (285), Expect = 2e-26
 Identities = 62/81 (76%), Positives = 63/81 (77%), Gaps = 3/81 (3%)

Query: 43  LSTSSPESARKLHPRPSDKLNPKTINPVHSDDEVFERGLNALVQLSVVVGPSLNDHLKHL 102
           L   +PE A  L PR    L       VHSDDEVFERGLNALVQLSVVVGPSLNDHLKHL
Sbjct: 144 LVKGAPEKAIPLLPRLIPVLKAAL---VHSDDEVFERGLNALVQLSVVVGPSLNDHLKHL 200

Query: 103 LTSGSLSIIKSKIPTYCSICC 123
           LTSGSLSIIKSKIPTYCSICC
Sbjct: 201 LTSGSLSIIKSKIPTYCSICC 221


>gi|28559039 mediator complex subunit 1 [Homo sapiens]
          Length = 1581

 Score = 31.2 bits (69), Expect = 0.21
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 13/81 (16%)

Query: 3    KSEGSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQG-------SKSSLSTSSPESARKLH 55
            KSEGS  ++L +    +  Q +S S+Q K+ +   G       +K  LS+ S  +  K  
Sbjct: 1118 KSEGSSSSKLSSSMYSS--QGSSGSSQSKNSSQSGGKPGSSPITKHGLSSGSSSTKMKPQ 1175

Query: 56   PRPSDKLNPK----TINPVHS 72
             +PS  +NP      I+P HS
Sbjct: 1176 GKPSSLMNPSLSKPNISPSHS 1196


>gi|112821690 G protein-regulated inducer of neurite outgrowth 3
           [Homo sapiens]
          Length = 776

 Score = 31.2 bits (69), Expect = 0.21
 Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 9/117 (7%)

Query: 3   KSEGSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLST-----SSPESARKLHPR 57
           KS+ SGGT+     T +  ++   ST  ++R     +  SL +     SSP S +K  P 
Sbjct: 567 KSQESGGTESAANPTPSPIRKNQESTLEENRQTKTATSLSLPSDPMGDSSPGSGKKT-PS 625

Query: 58  PSDKLNPKTINPVHSDDEVFERGLNALVQLSVVVGPSLNDHLKHLLTSGSLSIIKSK 114
            S K +P+   P    + + E+ LN +   +  VG +  D  K L     L + +SK
Sbjct: 626 RSVKASPR--RPSRVSEFLKEQKLN-VTAAAAQVGLTPGDKKKQLGADSKLQLKQSK 679


>gi|18450371 protein tyrosine phosphatase, receptor type, A isoform
           2 precursor [Homo sapiens]
          Length = 793

 Score = 30.8 bits (68), Expect = 0.27
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 20  YDQRTSSSTQLKHRNA----VQGSKSSLSTSSPESARKLHPRPSDKLNPKTINPVHSDDE 75
           Y Q  S S   +  N     V+     L   SP + RK  P P DKL  +    +  D++
Sbjct: 171 YKQAGSHSNSFRLSNGRTEDVEPQSVPLLARSPSTNRKYPPLPVDKLEEEINRRMADDNK 230

Query: 76  VFERGLNAL 84
           +F    NAL
Sbjct: 231 LFREEFNAL 239


>gi|4506303 protein tyrosine phosphatase, receptor type, A isoform 1
           precursor [Homo sapiens]
          Length = 802

 Score = 30.8 bits (68), Expect = 0.27
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 20  YDQRTSSSTQLKHRNA----VQGSKSSLSTSSPESARKLHPRPSDKLNPKTINPVHSDDE 75
           Y Q  S S   +  N     V+     L   SP + RK  P P DKL  +    +  D++
Sbjct: 180 YKQAGSHSNSFRLSNGRTEDVEPQSVPLLARSPSTNRKYPPLPVDKLEEEINRRMADDNK 239

Query: 76  VFERGLNAL 84
           +F    NAL
Sbjct: 240 LFREEFNAL 248


>gi|18450369 protein tyrosine phosphatase, receptor type, A isoform
           2 precursor [Homo sapiens]
          Length = 793

 Score = 30.8 bits (68), Expect = 0.27
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 20  YDQRTSSSTQLKHRNA----VQGSKSSLSTSSPESARKLHPRPSDKLNPKTINPVHSDDE 75
           Y Q  S S   +  N     V+     L   SP + RK  P P DKL  +    +  D++
Sbjct: 171 YKQAGSHSNSFRLSNGRTEDVEPQSVPLLARSPSTNRKYPPLPVDKLEEEINRRMADDNK 230

Query: 76  VFERGLNAL 84
           +F    NAL
Sbjct: 231 LFREEFNAL 239


>gi|60097902 filaggrin [Homo sapiens]
          Length = 4061

 Score = 29.6 bits (65), Expect = 0.60
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 14  NRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPRPSDKLNPKTINPVHSD 73
           N+   N + R   S+ L+ RN  +G+K   S S  E+  K H   S+K   K  +P H +
Sbjct: 113 NKQEENKENRKRPSS-LERRNNRKGNKGR-SKSPRETGGKRHESSSEKKERKGYSPTHRE 170

Query: 74  DE 75
           +E
Sbjct: 171 EE 172


>gi|117938254 BCL2-associated transcription factor 1 isoform 3 [Homo
           sapiens]
          Length = 747

 Score = 29.6 bits (65), Expect = 0.60
 Identities = 18/72 (25%), Positives = 30/72 (41%)

Query: 4   SEGSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPRPSDKLN 63
           S  S G++ + +   +Y +  S     KH+     S+SS S++SP S      + S K  
Sbjct: 541 SRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKER 600

Query: 64  PKTINPVHSDDE 75
            +     H   E
Sbjct: 601 EEEFKTHHEMKE 612


>gi|117938251 BCL2-associated transcription factor 1 isoform 2 [Homo
           sapiens]
          Length = 869

 Score = 29.6 bits (65), Expect = 0.60
 Identities = 18/72 (25%), Positives = 30/72 (41%)

Query: 4   SEGSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPRPSDKLN 63
           S  S G++ + +   +Y +  S     KH+     S+SS S++SP S      + S K  
Sbjct: 712 SRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKER 771

Query: 64  PKTINPVHSDDE 75
            +     H   E
Sbjct: 772 EEEFKTHHEMKE 783


>gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Homo
           sapiens]
          Length = 920

 Score = 29.6 bits (65), Expect = 0.60
 Identities = 18/72 (25%), Positives = 30/72 (41%)

Query: 4   SEGSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPRPSDKLN 63
           S  S G++ + +   +Y +  S     KH+     S+SS S++SP S      + S K  
Sbjct: 714 SRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKER 773

Query: 64  PKTINPVHSDDE 75
            +     H   E
Sbjct: 774 EEEFKTHHEMKE 785


>gi|10440566 leucine zipper, putative tumor suppressor 1 [Homo
           sapiens]
          Length = 596

 Score = 28.9 bits (63), Expect = 1.0
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 46  SSPESA-RKLHPRPSDKLNPKTINPVHSDDEVFERGLNALVQL 87
           SSPESA  +LHP P DK   + + P      + + G N++  L
Sbjct: 140 SSPESASHQLHPAPPDKPKEQELKPGLCSGALSDSGRNSMSSL 182


>gi|57222563 colonic and hepatic tumor over-expressed protein
           isoform b [Homo sapiens]
          Length = 1972

 Score = 28.9 bits (63), Expect = 1.0
 Identities = 12/31 (38%), Positives = 22/31 (70%)

Query: 72  SDDEVFERGLNALVQLSVVVGPSLNDHLKHL 102
           S+  + ++ LN L QL+V +GP++  H+K+L
Sbjct: 912 SNKILVQQTLNILQQLAVAMGPNIKQHVKNL 942


>gi|57164942 colonic and hepatic tumor over-expressed protein
           isoform a [Homo sapiens]
          Length = 2032

 Score = 28.9 bits (63), Expect = 1.0
 Identities = 12/31 (38%), Positives = 22/31 (70%)

Query: 72  SDDEVFERGLNALVQLSVVVGPSLNDHLKHL 102
           S+  + ++ LN L QL+V +GP++  H+K+L
Sbjct: 912 SNKILVQQTLNILQQLAVAMGPNIKQHVKNL 942


>gi|151301098 zinc finger, DBF-type containing 2 [Homo sapiens]
          Length = 2354

 Score = 28.9 bits (63), Expect = 1.0
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 35  AVQGSKSSLSTSSPESA-RKLHPRPSDKLNPKTINPVHSDDEV 76
           +VQ S+SSLS+ SP S     H  P + L+   +  ++ D EV
Sbjct: 698 SVQSSRSSLSSDSPASLYHSAHDEPQEALDEVNLKELNIDMEV 740


>gi|93102379 low density lipoprotein-related protein 1B precursor
            [Homo sapiens]
          Length = 4599

 Score = 28.1 bits (61), Expect = 1.8
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 10/72 (13%)

Query: 2    QKSEGSGGTQLKNRATGNYDQRTSSSTQL----------KHRNAVQGSKSSLSTSSPESA 51
            +  +GS   QL N         TS +T+           K+R + QG +S L  S  E  
Sbjct: 1830 EAQQGSNSCQLNNGGCSQLCLPTSETTRTCMCTVGYYLQKNRMSCQGIESFLMYSVHEGI 1889

Query: 52   RKLHPRPSDKLN 63
            R +   PSDK++
Sbjct: 1890 RGIPLEPSDKMD 1901


>gi|227497884 brain-enriched guanylate kinase-associated protein
           [Homo sapiens]
          Length = 593

 Score = 28.1 bits (61), Expect = 1.8
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 12/66 (18%)

Query: 4   SEGSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPRPSDKLN 63
           SEG  G +L  +  G     T+SS + +     QGS+ SL  SS E++ ++H  P+ +L+
Sbjct: 516 SEGGDGDRLGVQLCG-----TASSPEPE-----QGSRDSLEPSSMEASPEMH--PAARLS 563

Query: 64  PKTINP 69
           P+   P
Sbjct: 564 PQQAFP 569


>gi|13124765 brain-enriched guanylate kinase-associated protein
           [Homo sapiens]
          Length = 593

 Score = 28.1 bits (61), Expect = 1.8
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 12/66 (18%)

Query: 4   SEGSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPRPSDKLN 63
           SEG  G +L  +  G     T+SS + +     QGS+ SL  SS E++ ++H  P+ +L+
Sbjct: 516 SEGGDGDRLGVQLCG-----TASSPEPE-----QGSRDSLEPSSMEASPEMH--PAARLS 563

Query: 64  PKTINP 69
           P+   P
Sbjct: 564 PQQAFP 569


>gi|21361458 Rho guanine nucleotide exchange factor (GEF) 17 [Homo
           sapiens]
          Length = 2063

 Score = 28.1 bits (61), Expect = 1.8
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 8/94 (8%)

Query: 6   GSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPR---PSDKL 62
           GSGG++L N   G   +  S     +HR A     +  S  S      L P+   P+   
Sbjct: 716 GSGGSELSNGEAGEAYRSLSDPIPQRHRAATSEEPTGFSVDS-NLLGSLSPKTGLPATSA 774

Query: 63  NPKTINPVHSDDEV---FERGLNALVQLSVVVGP 93
             + +   HSD  V     +G   ++Q S+V GP
Sbjct: 775 MDEGLTSGHSDWSVGSEESKGYQEVIQ-SIVQGP 807


>gi|24431975 hypothetical protein LOC26148 [Homo sapiens]
          Length = 1247

 Score = 28.1 bits (61), Expect = 1.8
 Identities = 18/71 (25%), Positives = 34/71 (47%)

Query: 4   SEGSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPRPSDKLN 63
           S GSG      ++     + TSS+  L+H +++    +S  TS  E+A+     P +   
Sbjct: 707 SSGSGDAARAPKSVPRPKRLTSSTYNLRHAHSLGSLDASKVTSEKEAAQVNPIMPKENGA 766

Query: 64  PKTINPVHSDD 74
            ++ +P+  DD
Sbjct: 767 SESGDPLDEDD 777


>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
          Length = 2817

 Score = 28.1 bits (61), Expect = 1.8
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 3/66 (4%)

Query: 31   KHRNAVQGSKSSLSTSSPESARKLHPRPSDKLNPKTINPVHSDDEVFERGLNALVQLSVV 90
            +H+    G + SL     + A+++ P   +K +P T   V S D V  +   A+ ++S  
Sbjct: 2111 EHKPGPIGKERSLKNRKVKDAQQVEPEGQEKPSPAT---VRSTDPVTTKETKAVSEMSTE 2167

Query: 91   VGPSLN 96
            +G  ++
Sbjct: 2168 IGTMIS 2173


>gi|38202205 zinc finger, FYVE domain containing 26 [Homo sapiens]
          Length = 2539

 Score = 27.7 bits (60), Expect = 2.3
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)

Query: 10  TQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPRPSDKLNPKTINP 69
           +Q   R  G+     S+S++L    + +GS S++S  + E   +LHP P   L P   +P
Sbjct: 775 SQADGRDRGSNPSLESTSSELSTSTS-EGSLSAMSGRN-ELHSRLHPHPQSSLIPMMFSP 832

Query: 70  VHS 72
             S
Sbjct: 833 PES 835


>gi|239756568 PREDICTED: similar to BCL2-associated transcription
           factor 1 [Homo sapiens]
          Length = 869

 Score = 27.3 bits (59), Expect = 3.0
 Identities = 18/72 (25%), Positives = 29/72 (40%)

Query: 4   SEGSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPRPSDKLN 63
           S  S G++ + +   +Y +  S     KH+     S SS S++SP S      + S K  
Sbjct: 712 SRESRGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSLSSSSSASPSSPSSREEKESKKER 771

Query: 64  PKTINPVHSDDE 75
            +     H   E
Sbjct: 772 EEEFKTHHEMKE 783


>gi|169218320 PREDICTED: similar to BCL2-associated transcription
           factor 1 isoform 2 [Homo sapiens]
          Length = 869

 Score = 27.3 bits (59), Expect = 3.0
 Identities = 18/72 (25%), Positives = 29/72 (40%)

Query: 4   SEGSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPRPSDKLN 63
           S  S G++ + +   +Y +  S     KH+     S SS S++SP S      + S K  
Sbjct: 712 SRESRGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSLSSSSSASPSSPSSREEKESKKER 771

Query: 64  PKTINPVHSDDE 75
            +     H   E
Sbjct: 772 EEEFKTHHEMKE 783


>gi|23503285 leucine rich repeat containing 34 [Homo sapiens]
          Length = 419

 Score = 27.3 bits (59), Expect = 3.0
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 5/57 (8%)

Query: 38 GSKSSLSTSSPESARKLH-----PRPSDKLNPKTINPVHSDDEVFERGLNALVQLSV 89
          G+  ++   SPES  + H        S K+NP  ++ +   DE  ++GL A + L++
Sbjct: 26 GAALAVQRESPESGLQKHYSNLCMEKSQKINPFILHILQEVDEEIKKGLAAGITLNI 82


>gi|42733592 hypothetical protein LOC399693 [Homo sapiens]
          Length = 953

 Score = 27.3 bits (59), Expect = 3.0
 Identities = 12/19 (63%), Positives = 15/19 (78%)

Query: 37  QGSKSSLSTSSPESARKLH 55
           QGS +SL TS+P SA +LH
Sbjct: 166 QGSCASLGTSAPSSASRLH 184


>gi|83367077 mucin 16 [Homo sapiens]
          Length = 14507

 Score = 26.9 bits (58), Expect = 3.9
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 5/50 (10%)

Query: 6    GSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLH 55
            GSG T + +  TG     T+S T+    N +   + SLS S PE+   L+
Sbjct: 3253 GSGSTSISHLPTG-----TTSPTKSPTENMLATERVSLSPSPPEAWTNLY 3297


>gi|114842396 ankyrin-repeat and fibronectin type III domain
           containing 1 [Homo sapiens]
          Length = 763

 Score = 26.9 bits (58), Expect = 3.9
 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 3/64 (4%)

Query: 1   MQKSEGSGGTQLKNRATG--NYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPRP 58
           + +S G   T   + A+   N++ R   + Q+++ +  Q  K S + SSP +A++L+   
Sbjct: 45  LNESTGQLPTTCSSAASNSINWNCRVKMTQQMQNLHLCQSKKHS-APSSPNAAKRLYRNL 103

Query: 59  SDKL 62
           S+KL
Sbjct: 104 SEKL 107


>gi|82880648 MLK-related kinase isoform 1 [Homo sapiens]
          Length = 800

 Score = 26.9 bits (58), Expect = 3.9
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 2/72 (2%)

Query: 6   GSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPRPSDKLNPK 65
           G G   L +   G Y  ++  ST  + R   +  + S S  +P  +      P D   P 
Sbjct: 682 GRGSISLNSSPRGRYSGKSQHSTPSRGRYPGKFYRVSQSALNPHQSPDFKRSPRDLHQPN 741

Query: 66  TI--NPVHSDDE 75
           TI   P+H + +
Sbjct: 742 TIPGMPLHPETD 753


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 26.9 bits (58), Expect = 3.9
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 5/68 (7%)

Query: 2    QKSEGSGGTQLKNRATGNYDQRTSSSTQLKHRNAVQGSKSSLSTSSPESARKLHPRPSDK 61
            +K   S  +   + ++ +    +SSS+     ++   S SS S+SSP  A     +P  +
Sbjct: 2603 RKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPA-----KPGPQ 2657

Query: 62   LNPKTINP 69
              PK  +P
Sbjct: 2658 ALPKPASP 2665


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.125    0.350 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,862,295
Number of Sequences: 37866
Number of extensions: 192706
Number of successful extensions: 747
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 710
Number of HSP's gapped (non-prelim): 59
length of query: 123
length of database: 18,247,518
effective HSP length: 89
effective length of query: 34
effective length of database: 14,877,444
effective search space: 505833096
effective search space used: 505833096
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.