Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: BEGAIN Sequence: fasta or formatted (593aa) NCBI GI: 13124765
Description:

brain-enriched guanylate kinase-associated protein

Referenced in:

Additional Brain Proteins
Gap Junctions and Tight Junctions

Other entries for this name:
alt mRNA [593aa] brain-enriched guanylate kinase-associated protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.0         65           3
 C cysteine            1.9         11           1
 D aspartate           5.2         31           2
 E glutamate           9.1         54           5
 F phenylalanine       2.9         17           1
 G glycine             6.9         41           2
 H histidine           2.2         13           1
 I isoleucine          1.5          9           1
 K lysine              4.6         27           2
 L leucine             9.8         58           2
 M methionine          1.5          9           1
 N asparagine          1.5          9           1
 P proline             8.1         48           2
 Q glutamine           4.2         25           2
 R arginine            6.9         41           3
 S serine             11.1         66           3
 T threonine           4.2         25           2
 V valine              3.0         18           1
 W tryptophan          0.3          2           1
 Y tyrosine            4.0         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   brain-enriched guanylate kinase-associated protein [... 
BEGAIN                1.000   brain-enriched guanylate kinase-associated protein ...
TJAP1                 0.126   tight junction associated protein 1 isoform b [Homo...
TJAP1                 0.126   tight junction associated protein 1 isoform b [Homo...
TJAP1                 0.126   tight junction associated protein 1 isoform b [Homo...
TJAP1                 0.126   tight junction associated protein 1 isoform b [Homo...
TJAP1                 0.121   tight junction associated protein 1 isoform a [Homo...
TJAP1                 0.121   tight junction associated protein 1 isoform a [Homo...
FLJ22184              0.021   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.021   PREDICTED: hypothetical protein FLJ22184 
CGNL1                 0.018   cingulin-like 1 
VIM                   0.016   vimentin 
GOLGA8G               0.016   golgi autoantigen, golgin subfamily a, 8G 
NUMA1                 0.016   nuclear mitotic apparatus protein 1 
HOMER2                0.015   homer 2 isoform 2 
HOMER2                0.015   homer 2 isoform 1 
HOMER2                0.015   homer 2 isoform 4 
HOMER2                0.015   homer 2 isoform 3 
CEP63                 0.015   centrosomal protein 63 isoform b 
CEP63                 0.015   centrosomal protein 63 isoform a 
CEP63                 0.015   centrosomal protein 63 isoform d 
HOOK1                 0.015   hook homolog 1 
TPR                   0.015   nuclear pore complex-associated protein TPR 
RUFY1                 0.015   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.015   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.015   RUN and FYVE domain-containing 1 isoform a 
CTAGE5                0.015   CTAGE family, member 5 isoform 3 
CTAGE5                0.015   CTAGE family, member 5 isoform 1 
CTAGE5                0.015   CTAGE family, member 5 isoform 4 
CTAGE5                0.015   CTAGE family, member 5 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press