Guide to the Human Genome
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Name: BSCL2 Sequence: fasta or formatted (462aa) NCBI GI: 195230753
Description:

seipin isoform 1

Referenced in:

Adipose Tissue

Other entries for this name:
alt mRNA [462aa] seipin isoform 1
alt prot [398aa] seipin isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         34           3
 C cysteine            1.5          7           1
 D aspartate           3.9         18           1
 E glutamate           8.2         38           3
 F phenylalanine       3.7         17           1
 G glycine             7.8         36           2
 H histidine           2.2         10           1
 I isoleucine          3.2         15           2
 K lysine              2.4         11           1
 L leucine            10.8         50           4
 M methionine          1.9          9           1
 N asparagine          2.2         10           1
 P proline             7.4         34           2
 Q glutamine           4.8         22           2
 R arginine            6.3         29           2
 S serine              9.7         45           3
 T threonine           5.0         23           2
 V valine              6.3         29           1
 W tryptophan          1.5          7           1
 Y tyrosine            3.9         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   seipin isoform 1 
BSCL2                 1.000   seipin isoform 1 
BSCL2                 0.853   seipin isoform 2 
LIPE                  0.019   hormone-sensitive lipase 
RP1L1                 0.018   retinitis pigmentosa 1-like 1 
HUWE1                 0.018   HECT, UBA and WWE domain containing 1 
PAF1                  0.018   Paf1, RNA polymerase II associated factor, homolog [...
CASZ1                 0.015   castor homolog 1, zinc finger isoform a 
GTF2F1                0.014   general transcription factor IIF, polypeptide 1, 74...
DGCR2                 0.013   integral membrane protein DGCR2 
PTPRG                 0.013   protein tyrosine phosphatase, receptor type, G prec...
OGFR                  0.013   opioid growth factor receptor 
TMX4                  0.013   thioredoxin-related transmembrane protein 4 
CCDC136               0.013   coiled-coil domain containing 136 
AP3B2                 0.012   adaptor-related protein complex 3, beta 2 subunit [H...
KCTD1                 0.012   potassium channel tetramerisation domain containing...
ERCC6L                0.012   excision repair protein ERCC6-like 
RANGAP1               0.012   Ran GTPase activating protein 1 
MYT1                  0.012   myelin transcription factor 1 
SPANXN2               0.012   SPANX-N2 protein 
WNK2                  0.012   WNK lysine deficient protein kinase 2 
TSHZ2                 0.012   teashirt zinc finger homeobox 2 
NEFH                  0.011   neurofilament, heavy polypeptide 200kDa 
MYST4                 0.011   MYST histone acetyltransferase (monocytic leukemia)...
ZFHX2                 0.011   PREDICTED: zinc finger homeobox 2 
LOC100294444          0.011   PREDICTED: similar to family with sequence similari...
ZFHX2                 0.011   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.011   PREDICTED: zinc finger homeobox 2 
AKAP8                 0.011   A-kinase anchor protein 8 
FAM48B2               0.011   family with sequence similarity 48, member B2 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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