Guide to the Human Genome
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Name: SLC8A3 Sequence: fasta or formatted (298aa) NCBI GI: 194354001
Description:

solute carrier family 8 (sodium/calcium exchanger), member 3 isoform G

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [925aa] solute carrier family 8 (sodium/calcium exchanger), member 3 isof...
alt prot [924aa] solute carrier family 8 (sodium/calcium exchanger), member 3 isof...
alt prot [921aa] solute carrier family 8 (sodium/calcium exchanger), member 3 isof...
alt prot [284aa] solute carrier family 8 (sodium/calcium exchanger), member 3 isof...
alt prot [927aa] solute carrier family 8 (sodium/calcium exchanger), member 3 isof...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         30           3
 C cysteine            2.7          8           1
 D aspartate           4.4         13           1
 E glutamate           7.0         21           4
 F phenylalanine       6.7         20           1
 G glycine             8.1         24           2
 H histidine           2.3          7           1
 I isoleucine          6.4         19           2
 K lysine              4.4         13           2
 L leucine            10.1         30           2
 M methionine          2.0          6           1
 N asparagine          1.3          4           1
 P proline             2.7          8           2
 Q glutamine           1.3          4           1
 R arginine            3.0          9           3
 S serine              6.0         18           1
 T threonine           7.0         21           2
 V valine              9.1         27           2
 W tryptophan          2.3          7           1
 Y tyrosine            3.0          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 8 (sodium/calcium exchanger),... 
SLC8A3                1.000   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A3                0.990   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A3                0.981   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A3                0.972   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A3                0.955   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A2                0.822   solute carrier family 8 member 2 
SLC8A1                0.779   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A1                0.779   solute carrier family 8 (sodium/calcium exchanger),...
SLC8A1                0.779   solute carrier family 8 (sodium/calcium exchanger),...
SLC8A1                0.779   solute carrier family 8 (sodium/calcium exchanger),...
SLC24A3               0.069   solute carrier family 24 (sodium/potassium/calcium e...
SLC24A4               0.061   solute carrier family 24 member 4 isoform 3 
SLC24A4               0.061   solute carrier family 24 member 4 isoform 2 precurso...
SLC24A4               0.061   solute carrier family 24 member 4 isoform 1 precurso...
SLC24A2               0.050   solute carrier family 24 (sodium/potassium/calcium ex...
SLC24A1               0.043   solute carrier family 24 (sodium/potassium/calcium ex...
SLC24A5               0.035   solute carrier family 24, member 5 
SLC24A6               0.016   solute carrier family 24 member 6 
PTPRZ1                0.012   protein tyrosine phosphatase, receptor-type, zeta1 p...
LOC100293438          0.009   PREDICTED: hypothetical protein 
SPATA1                0.009   spermatogenesis associated 1 
HAO1                  0.007   hydroxyacid oxidase 1 
GRID2                 0.007   glutamate receptor, ionotropic, delta 2 
ILDR1                 0.007   immunoglobulin-like domain containing receptor 1 [Ho...
C1orf125              0.005   hypothetical protein LOC126859 isoform 1 
C1orf125              0.005   hypothetical protein LOC126859 isoform 2 
KLHL14                0.005   kelch-like 14 
KIFAP3                0.005   kinesin-associated protein 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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