Guide to the Human Genome
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Name: SLC8A3 Sequence: fasta or formatted (284aa) NCBI GI: 33946308
Description:

solute carrier family 8 (sodium/calcium exchanger), member 3 isoform F

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [925aa] solute carrier family 8 (sodium/calcium exchanger), member 3 isof...
alt prot [924aa] solute carrier family 8 (sodium/calcium exchanger), member 3 isof...
alt prot [298aa] solute carrier family 8 (sodium/calcium exchanger), member 3 isof...
alt prot [921aa] solute carrier family 8 (sodium/calcium exchanger), member 3 isof...
alt prot [927aa] solute carrier family 8 (sodium/calcium exchanger), member 3 isof...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6         30           3
 C cysteine            2.8          8           1
 D aspartate           3.9         11           1
 E glutamate           7.0         20           4
 F phenylalanine       7.0         20           1
 G glycine             8.1         23           2
 H histidine           2.5          7           1
 I isoleucine          6.3         18           2
 K lysine              4.2         12           2
 L leucine            10.2         29           2
 M methionine          1.8          5           1
 N asparagine          1.4          4           1
 P proline             2.8          8           2
 Q glutamine           1.4          4           1
 R arginine            2.5          7           3
 S serine              6.0         17           1
 T threonine           6.7         19           2
 V valine              9.2         26           2
 W tryptophan          2.5          7           1
 Y tyrosine            3.2          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 8 (sodium/calcium exchanger), ... 
SLC8A3                1.000   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A3                1.000   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A3                1.000   solute carrier family 8 (sodium/calcium exchanger),...
SLC8A3                1.000   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A3                1.000   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A2                0.842   solute carrier family 8 member 2 
SLC8A1                0.808   solute carrier family 8 (sodium/calcium exchanger), ...
SLC8A1                0.808   solute carrier family 8 (sodium/calcium exchanger),...
SLC8A1                0.808   solute carrier family 8 (sodium/calcium exchanger),...
SLC8A1                0.808   solute carrier family 8 (sodium/calcium exchanger),...
SLC24A3               0.072   solute carrier family 24 (sodium/potassium/calcium e...
SLC24A4               0.063   solute carrier family 24 member 4 isoform 3 
SLC24A4               0.063   solute carrier family 24 member 4 isoform 2 precurso...
SLC24A4               0.063   solute carrier family 24 member 4 isoform 1 precurso...
SLC24A2               0.053   solute carrier family 24 (sodium/potassium/calcium ex...
SLC24A1               0.045   solute carrier family 24 (sodium/potassium/calcium ex...
SLC24A5               0.036   solute carrier family 24, member 5 
SLC24A6               0.016   solute carrier family 24 member 6 
PTPRZ1                0.013   protein tyrosine phosphatase, receptor-type, zeta1 p...
LOC100293438          0.009   PREDICTED: hypothetical protein 
HAO1                  0.007   hydroxyacid oxidase 1 
GRID2                 0.007   glutamate receptor, ionotropic, delta 2 
ILDR1                 0.007   immunoglobulin-like domain containing receptor 1 [Ho...
KLHL14                0.005   kelch-like 14 
KIFAP3                0.005   kinesin-associated protein 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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